RNA–Protein interactions for RNA: ENST00000591622.1

CIRBP-233, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-233ENST00000591622 TSHZ3Q63HK5 1081 aa19.85■□□□□ 0.77
CIRBP-233ENST00000591622 FOXP4Q8IVH2 680 aaPredicted RBP19.85■□□□□ 0.77
CIRBP-233ENST00000591622 ZBTB47Q9UFB7 747 aaPredicted RBP19.85■□□□□ 0.77
CIRBP-233ENST00000591622 SAP30BPQ9UHR5 308 aaKnown RBP19.85■□□□□ 0.77
CIRBP-233ENST00000591622 KCNH4Q9UQ05 1017 aa19.85■□□□□ 0.77
CIRBP-233ENST00000591622 PTPRAP18433 802 aa19.84■□□□□ 0.77
CIRBP-233ENST00000591622 UBE3CQ15386 1083 aa19.84■□□□□ 0.77
CIRBP-233ENST00000591622 ZSCAN25Q6NSZ9 544 aa19.84■□□□□ 0.77
CIRBP-233ENST00000591622 METTL16Q86W50 562 aaKnown RBP19.84■□□□□ 0.77
CIRBP-233ENST00000591622 OTUD7AQ8TE49 926 aaPredicted RBP19.84■□□□□ 0.77
CIRBP-233ENST00000591622 ZNF296Q8WUU4 475 aaPredicted RBP19.84■□□□□ 0.77
CIRBP-233ENST00000591622 CRNKL1Q9BZJ0 848 aaKnown RBP19.84■□□□□ 0.77
CIRBP-233ENST00000591622 RWDD1Q9H446 243 aaPredicted RBP19.84■□□□□ 0.77
CIRBP-233ENST00000591622 ZHX2Q9Y6X8 837 aa19.84■□□□□ 0.77
CIRBP-233ENST00000591622 HLA-DOAP06340 250 aa19.83■□□□□ 0.77
CIRBP-233ENST00000591622 CRHR2Q13324 411 aa19.83■□□□□ 0.77
CIRBP-233ENST00000591622 SLFNL1Q499Z3 407 aa19.83■□□□□ 0.77
CIRBP-233ENST00000591622 FAM43AQ8N2R8 423 aa19.83■□□□□ 0.77
CIRBP-233ENST00000591622 CRACR2BQ8N4Y2 399 aaPredicted RBP19.83■□□□□ 0.77
CIRBP-233ENST00000591622 CXCL11O14625 94 aa19.82■□□□□ 0.76
CIRBP-233ENST00000591622 ERC2O15083 957 aa19.82■□□□□ 0.76
CIRBP-233ENST00000591622 CAP2P40123 477 aa19.82■□□□□ 0.76
CIRBP-233ENST00000591622 LCORLQ8N3X6 602 aa19.82■□□□□ 0.76
CIRBP-233ENST00000591622 KBTBD3Q8NAB2 608 aa19.82■□□□□ 0.76
CIRBP-233ENST00000591622 BTBD19C9JJ37 291 aa19.81■□□□□ 0.76
CIRBP-233ENST00000591622 FKTNO75072 461 aa19.81■□□□□ 0.76
CIRBP-233ENST00000591622 GLRX3O76003 335 aaKnown RBP19.81■□□□□ 0.76
CIRBP-233ENST00000591622 CHGBP05060 677 aa19.81■□□□□ 0.76
CIRBP-233ENST00000591622 MX1P20591 662 aa19.81■□□□□ 0.76
CIRBP-233ENST00000591622 RRP1BQ14684 758 aaKnown RBP19.81■□□□□ 0.76
CIRBP-233ENST00000591622 SLC4A8Q2Y0W8 1093 aa19.81■□□□□ 0.76
CIRBP-233ENST00000591622 PI4K2BQ8TCG2 481 aa19.81■□□□□ 0.76
CIRBP-233ENST00000591622 TRIM34Q9BYJ4 488 aa19.81■□□□□ 0.76
CIRBP-233ENST00000591622 DNAJC18Q9H819 358 aa19.81■□□□□ 0.76
CIRBP-233ENST00000591622 ARMT1Q9H993 441 aa19.81■□□□□ 0.76
CIRBP-233ENST00000591622 ZCCHC17Q9NP64 241 aaKnown RBP19.81■□□□□ 0.76
CIRBP-233ENST00000591622 AFG3L2Q9Y4W6 797 aa19.81■□□□□ 0.76
CIRBP-233ENST00000591622 FOCADQ5VW36 1801 aa19.81■□□□□ 0.76
CIRBP-233ENST00000591622 SALL3Q9BXA9 1300 aa19.8■□□□□ 0.76
CIRBP-233ENST00000591622 MBD4O95243 580 aa19.8■□□□□ 0.76
CIRBP-233ENST00000591622 DGKZQ13574 1117 aa19.8■□□□□ 0.76
CIRBP-233ENST00000591622 MOGSQ13724 837 aa19.8■□□□□ 0.76
CIRBP-233ENST00000591622 TAF1CQ15572 869 aaPredicted RBP19.8■□□□□ 0.76
CIRBP-233ENST00000591622 TTC6Q86TZ1 520 aa19.8■□□□□ 0.76
CIRBP-233ENST00000591622 SMC5Q8IY18 1101 aa19.8■□□□□ 0.76
CIRBP-233ENST00000591622 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.8■□□□□ 0.76
CIRBP-233ENST00000591622 CDK5RAP2Q96SN8 1893 aa19.79■□□□□ 0.76
CIRBP-233ENST00000591622 IGHDP01880 384 aa19.79■□□□□ 0.76
CIRBP-233ENST00000591622 ANKRD23Q86SG2 305 aa19.79■□□□□ 0.76
CIRBP-233ENST00000591622 SDR42E1Q8WUS8 393 aa19.79■□□□□ 0.76
CIRBP-233ENST00000591622 MCOLN1Q9GZU1 580 aa19.79■□□□□ 0.76
CIRBP-233ENST00000591622 EHD4Q9H223 541 aa19.79■□□□□ 0.76
CIRBP-233ENST00000591622 ZFYVE28Q9HCC9 887 aa19.79■□□□□ 0.76
CIRBP-233ENST00000591622 SERPINB13Q9UIV8 391 aa19.79■□□□□ 0.76
CIRBP-233ENST00000591622 CASP8AP2Q9UKL3 1982 aa19.78■□□□□ 0.76
CIRBP-233ENST00000591622 A0A0G2JLL6 359 aaPredicted RBP19.78■□□□□ 0.76
CIRBP-233ENST00000591622 PRRT2Q7Z6L0 340 aaPredicted RBP19.78■□□□□ 0.76
CIRBP-233ENST00000591622 CTU1Q7Z7A3 348 aaKnown RBP19.78■□□□□ 0.76
CIRBP-233ENST00000591622 CCDC84Q86UT8 332 aaPredicted RBP19.78■□□□□ 0.76
CIRBP-233ENST00000591622 PUS7LQ9H0K6 701 aaKnown RBP19.78■□□□□ 0.76
CIRBP-233ENST00000591622 DCP1AQ9NPI6 582 aaPredicted RBP19.78■□□□□ 0.76
CIRBP-233ENST00000591622 MCM9Q9NXL9 1143 aa19.78■□□□□ 0.76
CIRBP-233ENST00000591622 SIPA1L1O43166 1804 aa19.78■□□□□ 0.76
CIRBP-233ENST00000591622 TRIM75PA6NK02 468 aa19.77■□□□□ 0.76
CIRBP-233ENST00000591622 POLR3DP05423 398 aaPredicted RBP19.77■□□□□ 0.76
CIRBP-233ENST00000591622 ASNSP08243 561 aa19.77■□□□□ 0.76
CIRBP-233ENST00000591622 PLCD1P51178 756 aa19.77■□□□□ 0.76
CIRBP-233ENST00000591622 FASTKD5Q7L8L6 764 aaKnown RBP19.77■□□□□ 0.76
CIRBP-233ENST00000591622 ABHD8Q96I13 439 aa19.77■□□□□ 0.76
CIRBP-233ENST00000591622 TBC1D2Q9BYX2 928 aa19.77■□□□□ 0.76
CIRBP-233ENST00000591622 ATP8A2Q9NTI2 1148 aa19.77■□□□□ 0.76
CIRBP-233ENST00000591622 STAP2Q9UGK3 403 aa19.77■□□□□ 0.76
CIRBP-233ENST00000591622 DOCK1Q14185 1865 aa19.77■□□□□ 0.76
CIRBP-233ENST00000591622 USP17L5A8MUK1 530 aa19.76■□□□□ 0.75
CIRBP-233ENST00000591622 PDHXO00330 501 aa19.76■□□□□ 0.75
CIRBP-233ENST00000591622 RNF113AO15541 343 aaKnown RBP19.76■□□□□ 0.75
CIRBP-233ENST00000591622 PRKAB2O43741 272 aa19.76■□□□□ 0.75
CIRBP-233ENST00000591622 ZFYP08048 801 aaPredicted RBP19.76■□□□□ 0.75
CIRBP-233ENST00000591622 IRX6P78412 446 aaPredicted RBP19.76■□□□□ 0.75
CIRBP-233ENST00000591622 JAG1P78504 1218 aa19.76■□□□□ 0.75
CIRBP-233ENST00000591622 LRRFIP1Q32MZ4 808 aaKnown RBP19.76■□□□□ 0.75
CIRBP-233ENST00000591622 B4GALNT3Q6L9W6 998 aa19.76■□□□□ 0.75
CIRBP-233ENST00000591622 GPAT2Q6NUI2 795 aa19.76■□□□□ 0.75
CIRBP-233ENST00000591622 TATDN1Q6P1N9 297 aa19.76■□□□□ 0.75
CIRBP-233ENST00000591622 ZNF280CQ8ND82 737 aa19.76■□□□□ 0.75
CIRBP-233ENST00000591622 GINM1Q9NU53 330 aa19.76■□□□□ 0.75
CIRBP-233ENST00000591622 TLR2O60603 784 aa19.75■□□□□ 0.75
CIRBP-233ENST00000591622 PDE1AP54750 535 aa19.75■□□□□ 0.75
CIRBP-233ENST00000591622 SP3Q02447 781 aa19.75■□□□□ 0.75
CIRBP-233ENST00000591622 SPP2Q13103 211 aa19.75■□□□□ 0.75
CIRBP-233ENST00000591622 APPBP2Q92624 585 aa19.75■□□□□ 0.75
CIRBP-233ENST00000591622 LNPKQ9C0E8 428 aa19.75■□□□□ 0.75
CIRBP-233ENST00000591622 AS3MTQ9HBK9 375 aa19.75■□□□□ 0.75
CIRBP-233ENST00000591622 CAPN15O75808 1086 aa19.74■□□□□ 0.75
CIRBP-233ENST00000591622 GDF11O95390 407 aa19.74■□□□□ 0.75
CIRBP-233ENST00000591622 NUCB1Q02818 461 aa19.74■□□□□ 0.75
CIRBP-233ENST00000591622 GADL1Q6ZQY3 521 aa19.74■□□□□ 0.75
CIRBP-233ENST00000591622 CHD1LQ86WJ1 897 aa19.74■□□□□ 0.75
CIRBP-233ENST00000591622 OSBP2Q969R2 916 aa19.74■□□□□ 0.75
CIRBP-233ENST00000591622 WDR18Q9BV38 432 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms