RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 SMCR8Q8TEV9 937 aaPredicted RBP26.71■■□□□ 1.87
DDX39A-215ENST00000590696 AATFQ9NY61 560 aaKnown RBP eCLIP26.71■■□□□ 1.87
DDX39A-215ENST00000590696 GABRQQ9UN88 632 aa26.71■■□□□ 1.87
DDX39A-215ENST00000590696 AGTPBP1Q9UPW5 1226 aa26.71■■□□□ 1.87
DDX39A-215ENST00000590696 MGAMO43451 1857 aa26.7■■□□□ 1.87
DDX39A-215ENST00000590696 BAG3O95817 575 aa26.7■■□□□ 1.86
DDX39A-215ENST00000590696 ITPRIPQ8IWB1 547 aa26.7■■□□□ 1.86
DDX39A-215ENST00000590696 MIER1Q8N108 512 aa26.7■■□□□ 1.86
DDX39A-215ENST00000590696 PCDH10Q9P2E7 1040 aa26.7■■□□□ 1.86
DDX39A-215ENST00000590696 BIN2Q9UBW5 565 aaPredicted RBP26.7■■□□□ 1.86
DDX39A-215ENST00000590696 ZBTB7BO15156 539 aaPredicted RBP26.69■■□□□ 1.86
DDX39A-215ENST00000590696 CYP2E1P05181 493 aaPredicted RBP26.69■■□□□ 1.86
DDX39A-215ENST00000590696 CAP2P40123 477 aa26.69■■□□□ 1.86
DDX39A-215ENST00000590696 SPP2Q13103 211 aa26.69■■□□□ 1.86
DDX39A-215ENST00000590696 RRP1BQ14684 758 aaKnown RBP26.69■■□□□ 1.86
DDX39A-215ENST00000590696 TREML2Q5T2D2 321 aa26.69■■□□□ 1.86
DDX39A-215ENST00000590696 RLBP1P12271 317 aa26.68■■□□□ 1.86
DDX39A-215ENST00000590696 HABP4Q5JVS0 413 aaKnown RBP26.68■■□□□ 1.86
DDX39A-215ENST00000590696 PROCA1Q8NCQ7 364 aaPredicted RBP26.68■■□□□ 1.86
DDX39A-215ENST00000590696 ZNF280CQ8ND82 737 aa26.68■■□□□ 1.86
DDX39A-215ENST00000590696 ZNF512BQ96KM6 892 aaPredicted RBP26.68■■□□□ 1.86
DDX39A-215ENST00000590696 HERC5Q9UII4 1024 aaKnown RBP26.68■■□□□ 1.86
DDX39A-215ENST00000590696 NOP58Q9Y2X3 529 aaKnown RBP26.68■■□□□ 1.86
DDX39A-215ENST00000590696 CCL5P13501 91 aa26.67■■□□□ 1.86
DDX39A-215ENST00000590696 PLCG2P16885 1265 aa26.67■■□□□ 1.86
DDX39A-215ENST00000590696 ZAP70P43403 619 aa26.67■■□□□ 1.86
DDX39A-215ENST00000590696 UBXN2AP68543 259 aa26.67■■□□□ 1.86
DDX39A-215ENST00000590696 ADGRA1Q86SQ6 560 aa26.67■■□□□ 1.86
DDX39A-215ENST00000590696 TGFBRAP1Q8WUH2 860 aa26.67■■□□□ 1.86
DDX39A-215ENST00000590696 SHISA4Q96DD7 197 aa26.67■■□□□ 1.86
DDX39A-215ENST00000590696 TBC1D2Q9BYX2 928 aa26.67■■□□□ 1.86
DDX39A-215ENST00000590696 DHX36Q9H2U1 1008 aaKnown RBP26.67■■□□□ 1.86
DDX39A-215ENST00000590696 PI4KBQ9UBF8 816 aa26.67■■□□□ 1.86
DDX39A-215ENST00000590696 MAST2Q6P0Q8 1798 aa26.66■■□□□ 1.86
DDX39A-215ENST00000590696 USP17L5A8MUK1 530 aa26.66■■□□□ 1.86
DDX39A-215ENST00000590696 TNPO2O14787 897 aaKnown RBP26.66■■□□□ 1.86
DDX39A-215ENST00000590696 PPP4CP60510 307 aa26.66■■□□□ 1.86
DDX39A-215ENST00000590696 ANKRD13CQ8N6S4 541 aa26.66■■□□□ 1.86
DDX39A-215ENST00000590696 SLAIN1Q8ND83 568 aa26.66■■□□□ 1.86
DDX39A-215ENST00000590696 NKX2-3Q8TAU0 364 aa26.66■■□□□ 1.86
DDX39A-215ENST00000590696 RNF208Q9H0X6 261 aa26.66■■□□□ 1.86
DDX39A-215ENST00000590696 PNMA3Q9UL41 463 aa26.66■■□□□ 1.86
DDX39A-215ENST00000590696 ATAD5Q96QE3 1844 aa26.66■■□□□ 1.86
DDX39A-215ENST00000590696 FLT3LGP49771 235 aa26.65■■□□□ 1.86
DDX39A-215ENST00000590696 HMGCS2P54868 508 aa26.65■■□□□ 1.86
DDX39A-215ENST00000590696 MAPKAPK5Q8IW41 473 aa26.65■■□□□ 1.86
DDX39A-215ENST00000590696 CCDC8Q9H0W5 538 aaPredicted RBP26.65■■□□□ 1.86
DDX39A-215ENST00000590696 PIH1D3Q9NQM4 214 aaKnown RBP26.65■■□□□ 1.86
DDX39A-215ENST00000590696 TLR7Q9NYK1 1049 aaKnown RBP26.65■■□□□ 1.86
DDX39A-215ENST00000590696 DBNLQ9UJU6 430 aaKnown RBP26.65■■□□□ 1.86
DDX39A-215ENST00000590696 ADCY3O60266 1144 aa26.64■■□□□ 1.86
DDX39A-215ENST00000590696 GJB1P08034 283 aa26.64■■□□□ 1.86
DDX39A-215ENST00000590696 GJA8P48165 433 aa26.64■■□□□ 1.86
DDX39A-215ENST00000590696 EAF2Q96CJ1 260 aaPredicted RBP26.63■■□□□ 1.85
DDX39A-215ENST00000590696 AS3MTQ9HBK9 375 aa26.63■■□□□ 1.85
DDX39A-215ENST00000590696 MYO5AQ9Y4I1 1855 aaKnown RBP26.63■■□□□ 1.85
DDX39A-215ENST00000590696 FLT1P17948 1338 aa26.63■■□□□ 1.85
DDX39A-215ENST00000590696 SIPA1L1O43166 1804 aa26.62■■□□□ 1.85
DDX39A-215ENST00000590696 LOC285556D6RIA3 1793 aa26.62■■□□□ 1.85
DDX39A-215ENST00000590696 IGSF3O75054 1194 aa26.62■■□□□ 1.85
DDX39A-215ENST00000590696 PABPC4Q13310 644 aaKnown RBP eCLIP26.62■■□□□ 1.85
DDX39A-215ENST00000590696 SH3D19Q5HYK7 790 aa26.62■■□□□ 1.85
DDX39A-215ENST00000590696 ELNP15502 786 aa26.61■■□□□ 1.85
DDX39A-215ENST00000590696 FAM110CQ1W6H9 321 aa26.61■■□□□ 1.85
DDX39A-215ENST00000590696 FOXP4Q8IVH2 680 aaPredicted RBP26.61■■□□□ 1.85
DDX39A-215ENST00000590696 COA7Q96BR5 231 aa26.61■■□□□ 1.85
DDX39A-215ENST00000590696 UNC93B1Q9H1C4 597 aa26.61■■□□□ 1.85
DDX39A-215ENST00000590696 PALD1Q9ULE6 856 aa26.61■■□□□ 1.85
DDX39A-215ENST00000590696 CDK5RAP2Q96SN8 1893 aa26.6■■□□□ 1.85
DDX39A-215ENST00000590696 CYP7A1P22680 504 aa26.6■■□□□ 1.85
DDX39A-215ENST00000590696 DYNLL1P63167 89 aaKnown RBP26.6■■□□□ 1.85
DDX39A-215ENST00000590696 IRF5Q13568 498 aa26.6■■□□□ 1.85
DDX39A-215ENST00000590696 CEP85Q6P2H3 762 aa26.6■■□□□ 1.85
DDX39A-215ENST00000590696 CRACR2BQ8N4Y2 399 aaPredicted RBP26.6■■□□□ 1.85
DDX39A-215ENST00000590696 PXYLP1Q8TE99 480 aa26.6■■□□□ 1.85
DDX39A-215ENST00000590696 TRIM34Q9BYJ4 488 aa26.6■■□□□ 1.85
DDX39A-215ENST00000590696 DNAJC18Q9H819 358 aa26.6■■□□□ 1.85
DDX39A-215ENST00000590696 ASNSP08243 561 aa26.59■■□□□ 1.85
DDX39A-215ENST00000590696 GCLCP48506 637 aaPredicted RBP26.59■■□□□ 1.85
DDX39A-215ENST00000590696 JAG1P78504 1218 aa26.59■■□□□ 1.85
DDX39A-215ENST00000590696 DIEXFQ68CQ4 756 aaKnown RBP26.59■■□□□ 1.85
DDX39A-215ENST00000590696 METTL16Q86W50 562 aaKnown RBP26.59■■□□□ 1.85
DDX39A-215ENST00000590696 U2AF1L4Q8WU68 220 aaKnown RBP26.59■■□□□ 1.85
DDX39A-215ENST00000590696 WDR18Q9BV38 432 aa26.59■■□□□ 1.85
DDX39A-215ENST00000590696 ASCC2Q9H1I8 757 aaPredicted RBP26.59■■□□□ 1.85
DDX39A-215ENST00000590696 SAP30BPQ9UHR5 308 aaKnown RBP26.59■■□□□ 1.85
DDX39A-215ENST00000590696 TAOK2Q9UL54 1235 aa26.59■■□□□ 1.85
DDX39A-215ENST00000590696 FOCADQ5VW36 1801 aa26.58■■□□□ 1.85
DDX39A-215ENST00000590696 H0YGN5 161 aa26.58■■□□□ 1.85
DDX39A-215ENST00000590696 IDH1O75874 414 aaKnown RBP26.58■■□□□ 1.85
DDX39A-215ENST00000590696 INHAP05111 366 aa26.58■■□□□ 1.85
DDX39A-215ENST00000590696 DPF3Q92784 378 aa26.58■■□□□ 1.85
DDX39A-215ENST00000590696 COLQQ9Y215 455 aaPredicted RBP26.58■■□□□ 1.85
DDX39A-215ENST00000590696 BACE1P56817 501 aa26.57■■□□□ 1.84
DDX39A-215ENST00000590696 MTMR2Q13614 643 aa26.57■■□□□ 1.84
DDX39A-215ENST00000590696 UBE2Q1Q7Z7E8 422 aa26.57■■□□□ 1.84
DDX39A-215ENST00000590696 PANK1Q8TE04 598 aa26.57■■□□□ 1.84
DDX39A-215ENST00000590696 EXOC6BQ9Y2D4 811 aa26.57■■□□□ 1.84
DDX39A-215ENST00000590696 NDUFB9Q9Y6M9 179 aa26.57■■□□□ 1.84
DDX39A-215ENST00000590696 GDF11O95390 407 aa26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms