RNA–Protein interactions for RNA: ENST00000590599.1

CTDP1-205, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 2

Gene CTDP1, Length 1,762 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-205ENST00000590599 POLR3DP05423 398 aaPredicted RBP21.28■■□□□ 1
CTDP1-205ENST00000590599 FGRP09769 529 aa21.28■■□□□ 1
CTDP1-205ENST00000590599 NUCB2P80303 420 aa21.28■■□□□ 1
CTDP1-205ENST00000590599 PDE4BQ07343 736 aa21.28■■□□□ 1
CTDP1-205ENST00000590599 SLC4A8Q2Y0W8 1093 aa21.28■■□□□ 1
CTDP1-205ENST00000590599 APOBEC3HQ6NTF7 200 aaKnown RBP21.28■■□□□ 1
CTDP1-205ENST00000590599 ROBO3Q96MS0 1386 aa21.28■■□□□ 1
CTDP1-205ENST00000590599 WDR90Q96KV7 1748 aa21.28■■□□□ 1
CTDP1-205ENST00000590599 PFKFB2O60825 505 aa21.28■■□□□ 1
CTDP1-205ENST00000590599 VIL1P09327 827 aaKnown RBP21.28■■□□□ 1
CTDP1-205ENST00000590599 TMEM67Q5HYA8 995 aa21.28■■□□□ 1
CTDP1-205ENST00000590599 ZNF274Q96GC6 653 aaPredicted RBP21.28■■□□□ 1
CTDP1-205ENST00000590599 ZC3H4Q9UPT8 1303 aaKnown RBP21.28■■□□□ 1
CTDP1-205ENST00000590599 KLF18A0A0U1RQI7 1052 aa21.27■■□□□ 1
CTDP1-205ENST00000590599 IFIT3O14879 490 aaKnown RBP21.27■■□□□ 1
CTDP1-205ENST00000590599 ORC4O43929 436 aa21.27■■□□□ 1
CTDP1-205ENST00000590599 EVCP57679 992 aa21.27■■□□□ 1
CTDP1-205ENST00000590599 EVX2Q03828 476 aa21.27■■□□□ 1
CTDP1-205ENST00000590599 CDC42EP5Q6NZY7 148 aa21.27■■□□□ 1
CTDP1-205ENST00000590599 MTA3Q9BTC8 594 aa21.27■■□□□ 1
CTDP1-205ENST00000590599 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.27■■□□□ 1
CTDP1-205ENST00000590599 ERICH2A1L162 156 aa21.26■□□□□ 0.99
CTDP1-205ENST00000590599 RANBP6O60518 1105 aaKnown RBP21.26■□□□□ 0.99
CTDP1-205ENST00000590599 PRDM1O75626 825 aa21.26■□□□□ 0.99
CTDP1-205ENST00000590599 PICALMQ13492 652 aa21.26■□□□□ 0.99
CTDP1-205ENST00000590599 RAB3GAP1Q15042 981 aa21.26■□□□□ 0.99
CTDP1-205ENST00000590599 UBAC1Q9BSL1 405 aa21.26■□□□□ 0.99
CTDP1-205ENST00000590599 GOLGA8BA8MQT2 603 aa21.25■□□□□ 0.99
CTDP1-205ENST00000590599 PDIA3P30101 505 aaKnown RBP21.25■□□□□ 0.99
CTDP1-205ENST00000590599 IGDCC4Q8TDY8 1250 aa21.25■□□□□ 0.99
CTDP1-205ENST00000590599 CHMP4CQ96CF2 233 aa21.25■□□□□ 0.99
CTDP1-205ENST00000590599 PCNTO95613 3336 aa21.25■□□□□ 0.99
CTDP1-205ENST00000590599 WDHD1O75717 1129 aaPredicted RBP21.25■□□□□ 0.99
CTDP1-205ENST00000590599 SCRN1Q12765 414 aa21.25■□□□□ 0.99
CTDP1-205ENST00000590599 NFXL1Q6ZNB6 911 aa21.25■□□□□ 0.99
CTDP1-205ENST00000590599 LY9Q9HBG7 655 aa21.25■□□□□ 0.99
CTDP1-205ENST00000590599 HDAC9Q9UKV0 1011 aa21.25■□□□□ 0.99
CTDP1-205ENST00000590599 BRPF3Q9ULD4 1205 aa21.25■□□□□ 0.99
CTDP1-205ENST00000590599 TOMM70O94826 608 aa21.24■□□□□ 0.99
CTDP1-205ENST00000590599 GJB2P29033 226 aa21.24■□□□□ 0.99
CTDP1-205ENST00000590599 LIFRP42702 1097 aa21.24■□□□□ 0.99
CTDP1-205ENST00000590599 NT5C2P49902 561 aa21.24■□□□□ 0.99
CTDP1-205ENST00000590599 ZKSCAN3Q9BRR0 538 aa21.24■□□□□ 0.99
CTDP1-205ENST00000590599 POTEIP0CG38 1075 aa21.23■□□□□ 0.99
CTDP1-205ENST00000590599 POTEJP0CG39 1038 aa21.23■□□□□ 0.99
CTDP1-205ENST00000590599 PLCD1P51178 756 aa21.23■□□□□ 0.99
CTDP1-205ENST00000590599 CCT2P78371 535 aaKnown RBP21.23■□□□□ 0.99
CTDP1-205ENST00000590599 CXCL9Q07325 125 aa21.23■□□□□ 0.99
CTDP1-205ENST00000590599 CFAP100Q494V2 611 aa21.23■□□□□ 0.99
CTDP1-205ENST00000590599 CIAPIN1Q6FI81 312 aa21.23■□□□□ 0.99
CTDP1-205ENST00000590599 DPY19L2Q6NUT2 758 aa21.23■□□□□ 0.99
CTDP1-205ENST00000590599 IQCA1Q86XH1 822 aa21.23■□□□□ 0.99
CTDP1-205ENST00000590599 OGFOD1Q8N543 542 aa21.23■□□□□ 0.99
CTDP1-205ENST00000590599 AGBL3Q8NEM8 1001 aa21.23■□□□□ 0.99
CTDP1-205ENST00000590599 GMLQ99445 158 aa21.23■□□□□ 0.99
CTDP1-205ENST00000590599 ZNF287Q9HBT7 754 aa21.23■□□□□ 0.99
CTDP1-205ENST00000590599 CCDC69A6NI79 296 aa21.23■□□□□ 0.99
CTDP1-205ENST00000590599 WTAPQ15007 396 aa21.23■□□□□ 0.99
CTDP1-205ENST00000590599 SGMS1Q86VZ5 419 aa21.23■□□□□ 0.99
CTDP1-205ENST00000590599 DYNLL2Q96FJ2 89 aa21.23■□□□□ 0.99
CTDP1-205ENST00000590599 LLPHQ9BRT6 129 aaKnown RBP21.23■□□□□ 0.99
CTDP1-205ENST00000590599 MKNK2Q9HBH9 465 aa21.23■□□□□ 0.99
CTDP1-205ENST00000590599 PCDHAC2Q9Y5I4 1007 aa21.23■□□□□ 0.99
CTDP1-205ENST00000590599 FZD9O00144 591 aa21.22■□□□□ 0.99
CTDP1-205ENST00000590599 VEGFAP15692 232 aaPredicted RBP21.22■□□□□ 0.99
CTDP1-205ENST00000590599 PKP1Q13835 747 aa21.22■□□□□ 0.99
CTDP1-205ENST00000590599 ZSCAN10Q96SZ4 725 aaPredicted RBP21.22■□□□□ 0.99
CTDP1-205ENST00000590599 DDX4Q9NQI0 724 aaKnown RBP21.22■□□□□ 0.99
CTDP1-205ENST00000590599 ZBTB12Q9Y330 459 aaPredicted RBP21.22■□□□□ 0.99
CTDP1-205ENST00000590599 TNKSO95271 1327 aa21.21■□□□□ 0.99
CTDP1-205ENST00000590599 TNIP1Q15025 636 aa21.21■□□□□ 0.99
CTDP1-205ENST00000590599 APOA5Q6Q788 366 aa21.21■□□□□ 0.99
CTDP1-205ENST00000590599 TTC6Q86TZ1 520 aa21.21■□□□□ 0.99
CTDP1-205ENST00000590599 TMTC2Q8N394 836 aa21.21■□□□□ 0.99
CTDP1-205ENST00000590599 TNPO1Q92973 898 aaKnown RBP21.21■□□□□ 0.99
CTDP1-205ENST00000590599 OSBPL5Q9H0X9 879 aaPredicted RBP21.21■□□□□ 0.99
CTDP1-205ENST00000590599 SENP2Q9HC62 589 aa21.21■□□□□ 0.99
CTDP1-205ENST00000590599 NCOA5Q9HCD5 579 aaKnown RBP21.21■□□□□ 0.99
CTDP1-205ENST00000590599 SLC12A7Q9Y666 1083 aa21.21■□□□□ 0.99
CTDP1-205ENST00000590599 TSPY2A6NKD2 308 aa21.2■□□□□ 0.99
CTDP1-205ENST00000590599 DHX16O60231 1041 aaKnown RBP21.2■□□□□ 0.99
CTDP1-205ENST00000590599 SYNE3Q6ZMZ3 975 aa21.2■□□□□ 0.99
CTDP1-205ENST00000590599 HPS5Q9UPZ3 1129 aa21.2■□□□□ 0.99
CTDP1-205ENST00000590599 ZBTB43O43298 467 aa21.2■□□□□ 0.98
CTDP1-205ENST00000590599 NFIAQ12857 509 aa21.2■□□□□ 0.98
CTDP1-205ENST00000590599 FAM47AQ5JRC9 791 aa21.2■□□□□ 0.98
CTDP1-205ENST00000590599 C16orf86Q6ZW13 317 aa21.2■□□□□ 0.98
CTDP1-205ENST00000590599 METAP2P50579 478 aaKnown RBP eCLIP21.19■□□□□ 0.98
CTDP1-205ENST00000590599 HTRA3P83110 453 aa21.19■□□□□ 0.98
CTDP1-205ENST00000590599 DLGAP5Q15398 846 aa21.19■□□□□ 0.98
CTDP1-205ENST00000590599 NFKBIBQ15653 356 aa21.19■□□□□ 0.98
CTDP1-205ENST00000590599 MICU3Q86XE3 530 aa21.19■□□□□ 0.98
CTDP1-205ENST00000590599 RAB11FIP4Q86YS3 637 aa21.19■□□□□ 0.98
CTDP1-205ENST00000590599 SLC44A5Q8NCS7 719 aa21.19■□□□□ 0.98
CTDP1-205ENST00000590599 IDI2Q9BXS1 227 aa21.19■□□□□ 0.98
CTDP1-205ENST00000590599 GJA3Q9Y6H8 435 aa21.19■□□□□ 0.98
CTDP1-205ENST00000590599 SCN4AP35499 1836 aa21.19■□□□□ 0.98
CTDP1-205ENST00000590599 JAK2O60674 1132 aa21.18■□□□□ 0.98
CTDP1-205ENST00000590599 DTNBO60941 627 aa21.18■□□□□ 0.98
CTDP1-205ENST00000590599 HLA-DOAP06340 250 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms