RNA–Protein interactions for RNA: ENST00000590013.2

PIK3C3-212, Transcript of phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

TSL 5

Gene PIK3C3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3-212ENST00000590013 HIRIP3Q9BW71 556 aaPredicted RBP7.72□□□□□ -1.17
PIK3C3-212ENST00000590013 CHRDQ9H2X0 955 aa7.72□□□□□ -1.17
PIK3C3-212ENST00000590013 LRPPRCP42704 1394 aaKnown RBP7.71□□□□□ -1.17
PIK3C3-212ENST00000590013 MSH6P52701 1360 aa7.71□□□□□ -1.17
PIK3C3-212ENST00000590013 TMEM94Q12767 1356 aa7.71□□□□□ -1.17
PIK3C3-212ENST00000590013 EIF3AQ14152 1382 aaKnown RBP7.71□□□□□ -1.17
PIK3C3-212ENST00000590013 PTPRUQ92729 1446 aa7.71□□□□□ -1.17
PIK3C3-212ENST00000590013 NRXN1Q9ULB1 1477 aa7.71□□□□□ -1.18
PIK3C3-212ENST00000590013 GSC2O15499 205 aa7.71□□□□□ -1.18
PIK3C3-212ENST00000590013 PRPF40AO75400 957 aaKnown RBP7.71□□□□□ -1.18
PIK3C3-212ENST00000590013 CES1P23141 567 aa7.71□□□□□ -1.18
PIK3C3-212ENST00000590013 XPCQ01831 940 aaPredicted RBP7.71□□□□□ -1.18
PIK3C3-212ENST00000590013 GDF6Q6KF10 455 aaPredicted RBP7.71□□□□□ -1.18
PIK3C3-212ENST00000590013 NSUN5Q96P11 429 aaKnown RBP7.71□□□□□ -1.18
PIK3C3-212ENST00000590013 DNAJC25Q9H1X3 360 aa7.71□□□□□ -1.18
PIK3C3-212ENST00000590013 KANSL3Q9P2N6 904 aa7.71□□□□□ -1.18
PIK3C3-212ENST00000590013 PARP2Q9UGN5 583 aa7.71□□□□□ -1.18
PIK3C3-212ENST00000590013 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.71□□□□□ -1.18
PIK3C3-212ENST00000590013 CPS1P31327 1500 aa7.71□□□□□ -1.18
PIK3C3-212ENST00000590013 CHD2O14647 1828 aaKnown RBP7.71□□□□□ -1.18
PIK3C3-212ENST00000590013 TRPM1Q7Z4N2 1603 aa7.7□□□□□ -1.18
PIK3C3-212ENST00000590013 TOM1O60784 492 aa7.7□□□□□ -1.18
PIK3C3-212ENST00000590013 FSTP19883 344 aa7.7□□□□□ -1.18
PIK3C3-212ENST00000590013 ALG1LQ6GMV1 187 aa7.7□□□□□ -1.18
PIK3C3-212ENST00000590013 PI16Q6UXB8 463 aa7.7□□□□□ -1.18
PIK3C3-212ENST00000590013 OR13H1Q8NG92 308 aa7.7□□□□□ -1.18
PIK3C3-212ENST00000590013 CCDC74AQ96AQ1 378 aa7.7□□□□□ -1.18
PIK3C3-212ENST00000590013 KRTAP4-12Q9BQ66 201 aa7.7□□□□□ -1.18
PIK3C3-212ENST00000590013 PPME1Q9Y570 386 aa7.7□□□□□ -1.18
PIK3C3-212ENST00000590013 CENPJQ9HC77 1338 aaPredicted RBP7.7□□□□□ -1.18
PIK3C3-212ENST00000590013 ROBO2Q9HCK4 1378 aa7.7□□□□□ -1.18
PIK3C3-212ENST00000590013 NKTRP30414 1462 aaKnown RBP7.69□□□□□ -1.18
PIK3C3-212ENST00000590013 EPS8L3Q8TE67 593 aaKnown RBP7.69□□□□□ -1.18
PIK3C3-212ENST00000590013 C19orf44Q9H6X5 657 aa7.69□□□□□ -1.18
PIK3C3-212ENST00000590013 KIAA1522Q9P206 1035 aaPredicted RBP7.69□□□□□ -1.18
PIK3C3-212ENST00000590013 ABCC11Q96J66 1382 aa7.69□□□□□ -1.18
PIK3C3-212ENST00000590013 KIAA1210Q9ULL0 1709 aa7.69□□□□□ -1.18
PIK3C3-212ENST00000590013 RALGAPBQ86X10 1494 aa7.68□□□□□ -1.18
PIK3C3-212ENST00000590013 LRRC7Q96NW7 1537 aa7.68□□□□□ -1.18
PIK3C3-212ENST00000590013 ALX3O95076 343 aa7.68□□□□□ -1.18
PIK3C3-212ENST00000590013 FGD1P98174 961 aa7.68□□□□□ -1.18
PIK3C3-212ENST00000590013 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.68□□□□□ -1.18
PIK3C3-212ENST00000590013 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.68□□□□□ -1.18
PIK3C3-212ENST00000590013 PMEPA1Q969W9 287 aa7.68□□□□□ -1.18
PIK3C3-212ENST00000590013 STRCP1A6NGW2 1772 aa7.68□□□□□ -1.18
PIK3C3-212ENST00000590013 PLEKHH1Q9ULM0 1364 aa7.68□□□□□ -1.18
PIK3C3-212ENST00000590013 ASXL1Q8IXJ9 1541 aa7.68□□□□□ -1.18
PIK3C3-212ENST00000590013 SETD1AO15047 1707 aaKnown RBP7.67□□□□□ -1.18
PIK3C3-212ENST00000590013 ST20-MTHFSA0A0A6YYL1 179 aa7.67□□□□□ -1.18
PIK3C3-212ENST00000590013 HYAL2Q12891 473 aa7.67□□□□□ -1.18
PIK3C3-212ENST00000590013 PSMD2Q13200 908 aa7.67□□□□□ -1.18
PIK3C3-212ENST00000590013 COL13A1Q5TAT6 717 aaPredicted RBP7.67□□□□□ -1.18
PIK3C3-212ENST00000590013 SPACA7Q96KW9 195 aa7.67□□□□□ -1.18
PIK3C3-212ENST00000590013 BCL11AQ9H165 835 aa7.67□□□□□ -1.18
PIK3C3-212ENST00000590013 MRS2Q9HD23 443 aa7.67□□□□□ -1.18
PIK3C3-212ENST00000590013 NPHS2Q9NP85 383 aa7.67□□□□□ -1.18
PIK3C3-212ENST00000590013 NLRP2Q9NX02 1062 aa7.67□□□□□ -1.18
PIK3C3-212ENST00000590013 TRIM33Q9UPN9 1127 aa7.67□□□□□ -1.18
PIK3C3-212ENST00000590013 RAXQ9Y2V3 346 aa7.67□□□□□ -1.18
PIK3C3-212ENST00000590013 USP47Q96K76 1375 aa7.67□□□□□ -1.18
PIK3C3-212ENST00000590013 NWD1Q149M9 1564 aa7.67□□□□□ -1.18
PIK3C3-212ENST00000590013 XRN1Q8IZH2 1706 aaKnown RBP7.66□□□□□ -1.18
PIK3C3-212ENST00000590013 GADD45BO75293 160 aaPredicted RBP7.66□□□□□ -1.18
PIK3C3-212ENST00000590013 HSPA5P11021 654 aaKnown RBP7.66□□□□□ -1.18
PIK3C3-212ENST00000590013 CD97P48960 835 aa7.66□□□□□ -1.18
PIK3C3-212ENST00000590013 UVSSAQ2YD98 709 aa7.66□□□□□ -1.18
PIK3C3-212ENST00000590013 NCAPG2Q86XI2 1143 aa7.66□□□□□ -1.18
PIK3C3-212ENST00000590013 FBF1Q8TES7 1133 aa7.66□□□□□ -1.18
PIK3C3-212ENST00000590013 CEP41Q9BYV8 373 aa7.66□□□□□ -1.18
PIK3C3-212ENST00000590013 LATS2Q9NRM7 1088 aa7.66□□□□□ -1.18
PIK3C3-212ENST00000590013 PCMTD2Q9NV79 361 aa7.66□□□□□ -1.18
PIK3C3-212ENST00000590013 EVC2Q86UK5 1308 aa7.66□□□□□ -1.18
PIK3C3-212ENST00000590013 PTCH1Q13635 1447 aa7.66□□□□□ -1.18
PIK3C3-212ENST00000590013 FAM135BQ49AJ0 1406 aa7.66□□□□□ -1.18
PIK3C3-212ENST00000590013 ADGRB1O14514 1584 aa7.66□□□□□ -1.18
PIK3C3-212ENST00000590013 LTBP4Q8N2S1 1624 aa7.66□□□□□ -1.18
PIK3C3-212ENST00000590013 SMNDC1O75940 238 aaKnown RBP eCLIP7.65□□□□□ -1.18
PIK3C3-212ENST00000590013 KIF4AO95239 1232 aa7.65□□□□□ -1.18
PIK3C3-212ENST00000590013 TMF1P82094 1093 aa7.65□□□□□ -1.18
PIK3C3-212ENST00000590013 DAB2P98082 770 aa7.65□□□□□ -1.18
PIK3C3-212ENST00000590013 KNDC1Q76NI1 1749 aa7.65□□□□□ -1.18
PIK3C3-212ENST00000590013 KRTAP1-3Q8IUG1 177 aa7.65□□□□□ -1.18
PIK3C3-212ENST00000590013 GALNT12Q8IXK2 581 aa7.65□□□□□ -1.18
PIK3C3-212ENST00000590013 CDK19Q9BWU1 502 aa7.65□□□□□ -1.18
PIK3C3-212ENST00000590013 ADGRL3Q9HAR2 1447 aa7.65□□□□□ -1.18
PIK3C3-212ENST00000590013 ARHGEF28Q8N1W1 1705 aaKnown RBP7.64□□□□□ -1.19
PIK3C3-212ENST00000590013 QRICH2Q9H0J4 1663 aa7.64□□□□□ -1.19
PIK3C3-212ENST00000590013 DLC1Q96QB1 1528 aa7.64□□□□□ -1.19
PIK3C3-212ENST00000590013 TECPR2O15040 1411 aa7.64□□□□□ -1.19
PIK3C3-212ENST00000590013 NCOA3Q9Y6Q9 1424 aa7.64□□□□□ -1.19
PIK3C3-212ENST00000590013 TRPA1O75762 1119 aa7.64□□□□□ -1.19
PIK3C3-212ENST00000590013 EDN3P14138 238 aa7.64□□□□□ -1.19
PIK3C3-212ENST00000590013 ACPPP15309 386 aa7.64□□□□□ -1.19
PIK3C3-212ENST00000590013 GLB1P16278 677 aa7.64□□□□□ -1.19
PIK3C3-212ENST00000590013 GNA15P30679 374 aa7.64□□□□□ -1.19
PIK3C3-212ENST00000590013 CD68P34810 354 aaPredicted RBP7.64□□□□□ -1.19
PIK3C3-212ENST00000590013 TSNAXIP1Q2TAA8 658 aa7.64□□□□□ -1.19
PIK3C3-212ENST00000590013 TMC4Q7Z404 712 aa7.64□□□□□ -1.19
PIK3C3-212ENST00000590013 KLHL23Q8NBE8 558 aa7.64□□□□□ -1.19
PIK3C3-212ENST00000590013 NGDNQ8NEJ9 315 aaKnown RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms