RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 TDRD3Q9H7E2 651 aaKnown RBP20.55■□□□□ 0.88
CXXC1-212ENST00000589940 NT5C2P49902 561 aa20.54■□□□□ 0.88
CXXC1-212ENST00000589940 MTA3Q9BTC8 594 aa20.54■□□□□ 0.88
CXXC1-212ENST00000589940 ANGEL1Q9UNK9 670 aaKnown RBP20.54■□□□□ 0.88
CXXC1-212ENST00000589940 MYH1P12882 1939 aa20.54■□□□□ 0.88
CXXC1-212ENST00000589940 ZNF541Q9H0D2 1346 aa20.54■□□□□ 0.88
CXXC1-212ENST00000589940 SH2B2O14492 632 aaPredicted RBP20.54■□□□□ 0.88
CXXC1-212ENST00000589940 CACNB3P54284 484 aa20.54■□□□□ 0.88
CXXC1-212ENST00000589940 EVCP57679 992 aa20.54■□□□□ 0.88
CXXC1-212ENST00000589940 APOBRQ0VD83 1088 aa20.54■□□□□ 0.88
CXXC1-212ENST00000589940 TTC6Q86TZ1 520 aa20.54■□□□□ 0.88
CXXC1-212ENST00000589940 DPF2Q92785 391 aa20.54■□□□□ 0.88
CXXC1-212ENST00000589940 DYNLL2Q96FJ2 89 aa20.54■□□□□ 0.88
CXXC1-212ENST00000589940 GPHNQ9NQX3 736 aaPredicted RBP20.54■□□□□ 0.88
CXXC1-212ENST00000589940 GJA3Q9Y6H8 435 aa20.54■□□□□ 0.88
CXXC1-212ENST00000589940 DICER1Q9UPY3 1922 aaKnown RBP20.53■□□□□ 0.88
CXXC1-212ENST00000589940 SOCS7O14512 581 aa20.53■□□□□ 0.88
CXXC1-212ENST00000589940 RANBP6O60518 1105 aaKnown RBP20.53■□□□□ 0.88
CXXC1-212ENST00000589940 ZNF280AP59817 542 aaPredicted RBP20.53■□□□□ 0.88
CXXC1-212ENST00000589940 SART3Q15020 963 aaKnown RBP20.53■□□□□ 0.88
CXXC1-212ENST00000589940 FAM198AQ9UFP1 575 aa20.53■□□□□ 0.88
CXXC1-212ENST00000589940 DDIT3P35638 169 aa20.53■□□□□ 0.88
CXXC1-212ENST00000589940 GMPSP49915 693 aaPredicted RBP20.53■□□□□ 0.88
CXXC1-212ENST00000589940 IGDCC4Q8TDY8 1250 aa20.53■□□□□ 0.88
CXXC1-212ENST00000589940 ZNF287Q9HBT7 754 aa20.53■□□□□ 0.88
CXXC1-212ENST00000589940 SBF1O95248 1867 aa20.52■□□□□ 0.88
CXXC1-212ENST00000589940 IFIT3O14879 490 aaKnown RBP20.52■□□□□ 0.88
CXXC1-212ENST00000589940 TMEM67Q5HYA8 995 aa20.52■□□□□ 0.88
CXXC1-212ENST00000589940 C16orf86Q6ZW13 317 aa20.52■□□□□ 0.88
CXXC1-212ENST00000589940 MYOZ2Q9NPC6 264 aa20.52■□□□□ 0.88
CXXC1-212ENST00000589940 TMOD2Q9NZR1 351 aa20.52■□□□□ 0.88
CXXC1-212ENST00000589940 CCDC83Q8IWF9 413 aa20.51■□□□□ 0.87
CXXC1-212ENST00000589940 ZNF274Q96GC6 653 aaPredicted RBP20.51■□□□□ 0.87
CXXC1-212ENST00000589940 ZBED3Q96IU2 234 aaPredicted RBP20.51■□□□□ 0.87
CXXC1-212ENST00000589940 UBAC1Q9BSL1 405 aa20.51■□□□□ 0.87
CXXC1-212ENST00000589940 MKNK2Q9HBH9 465 aa20.51■□□□□ 0.87
CXXC1-212ENST00000589940 CWC22Q9HCG8 908 aaKnown RBP20.51■□□□□ 0.87
CXXC1-212ENST00000589940 LIFRP42702 1097 aa20.51■□□□□ 0.87
CXXC1-212ENST00000589940 NECAB1Q8N987 351 aa20.51■□□□□ 0.87
CXXC1-212ENST00000589940 LY9Q9HBG7 655 aa20.51■□□□□ 0.87
CXXC1-212ENST00000589940 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.51■□□□□ 0.87
CXXC1-212ENST00000589940 SHTN1A0MZ66 631 aa20.5■□□□□ 0.87
CXXC1-212ENST00000589940 ENTPD3O75355 529 aa20.5■□□□□ 0.87
CXXC1-212ENST00000589940 ST3GAL1Q11201 340 aa20.5■□□□□ 0.87
CXXC1-212ENST00000589940 SPDYE2Q495Y8 402 aa20.5■□□□□ 0.87
CXXC1-212ENST00000589940 GTF3C6Q969F1 213 aa20.5■□□□□ 0.87
CXXC1-212ENST00000589940 DHX36Q9H2U1 1008 aaKnown RBP20.5■□□□□ 0.87
CXXC1-212ENST00000589940 ERICH2A1L162 156 aa20.5■□□□□ 0.87
CXXC1-212ENST00000589940 PFKFB2O60825 505 aa20.5■□□□□ 0.87
CXXC1-212ENST00000589940 HLA-DOAP06340 250 aa20.5■□□□□ 0.87
CXXC1-212ENST00000589940 TCP10Q12799 353 aa20.5■□□□□ 0.87
CXXC1-212ENST00000589940 STK3Q13188 491 aa20.5■□□□□ 0.87
CXXC1-212ENST00000589940 SGMS1Q86VZ5 419 aa20.5■□□□□ 0.87
CXXC1-212ENST00000589940 IQCA1Q86XH1 822 aa20.5■□□□□ 0.87
CXXC1-212ENST00000589940 ZFPM1Q8IX07 1006 aa20.5■□□□□ 0.87
CXXC1-212ENST00000589940 GPC2Q8N158 579 aa20.5■□□□□ 0.87
CXXC1-212ENST00000589940 SLC44A5Q8NCS7 719 aa20.5■□□□□ 0.87
CXXC1-212ENST00000589940 ZKSCAN3Q9BRR0 538 aa20.5■□□□□ 0.87
CXXC1-212ENST00000589940 RNF181Q9P0P0 153 aa20.5■□□□□ 0.87
CXXC1-212ENST00000589940 ZNF70Q9UC06 446 aaPredicted RBP20.5■□□□□ 0.87
CXXC1-212ENST00000589940 KLF18A0A0U1RQI7 1052 aa20.49■□□□□ 0.87
CXXC1-212ENST00000589940 MYO1BO43795 1136 aa20.49■□□□□ 0.87
CXXC1-212ENST00000589940 PDIA3P30101 505 aaKnown RBP20.49■□□□□ 0.87
CXXC1-212ENST00000589940 CDK8P49336 464 aa20.49■□□□□ 0.87
CXXC1-212ENST00000589940 MICALL2Q8IY33 904 aa20.49■□□□□ 0.87
CXXC1-212ENST00000589940 BRPF3Q9ULD4 1205 aa20.49■□□□□ 0.87
CXXC1-212ENST00000589940 TSPY2A6NKD2 308 aa20.49■□□□□ 0.87
CXXC1-212ENST00000589940 WNT10BO00744 389 aa20.49■□□□□ 0.87
CXXC1-212ENST00000589940 GABPAQ06546 454 aa20.49■□□□□ 0.87
CXXC1-212ENST00000589940 WTAPQ15007 396 aa20.49■□□□□ 0.87
CXXC1-212ENST00000589940 ZSCAN10Q96SZ4 725 aaPredicted RBP20.49■□□□□ 0.87
CXXC1-212ENST00000589940 EHD4Q9H223 541 aa20.49■□□□□ 0.87
CXXC1-212ENST00000589940 CNOT7Q9UIV1 285 aaKnown RBP20.49■□□□□ 0.87
CXXC1-212ENST00000589940 SERPINB13Q9UIV8 391 aa20.49■□□□□ 0.87
CXXC1-212ENST00000589940 CIZ1Q9ULV3 898 aaPredicted RBP20.49■□□□□ 0.87
CXXC1-212ENST00000589940 TNKSO95271 1327 aa20.48■□□□□ 0.87
CXXC1-212ENST00000589940 COL2A1P02458 1487 aaPredicted RBP20.48■□□□□ 0.87
CXXC1-212ENST00000589940 CLRN2A0PK11 232 aa20.48■□□□□ 0.87
CXXC1-212ENST00000589940 GPR162Q16538 588 aa20.48■□□□□ 0.87
CXXC1-212ENST00000589940 FAM47AQ5JRC9 791 aa20.48■□□□□ 0.87
CXXC1-212ENST00000589940 FKBP1CQ5VVH2 108 aa20.48■□□□□ 0.87
CXXC1-212ENST00000589940 ZNF444Q8N0Y2 327 aaPredicted RBP20.48■□□□□ 0.87
CXXC1-212ENST00000589940 TMTC2Q8N394 836 aa20.48■□□□□ 0.87
CXXC1-212ENST00000589940 CHMP5Q9NZZ3 219 aa20.48■□□□□ 0.87
CXXC1-212ENST00000589940 NAP1L2Q9ULW6 460 aaPredicted RBP20.48■□□□□ 0.87
CXXC1-212ENST00000589940 RASA1P20936 1047 aa20.47■□□□□ 0.87
CXXC1-212ENST00000589940 SEC23AQ15436 765 aa20.47■□□□□ 0.87
CXXC1-212ENST00000589940 NFXL1Q6ZNB6 911 aa20.47■□□□□ 0.87
CXXC1-212ENST00000589940 SENP2Q9HC62 589 aa20.47■□□□□ 0.87
CXXC1-212ENST00000589940 SWAP70Q9UH65 585 aa20.47■□□□□ 0.87
CXXC1-212ENST00000589940 ATRNL1Q5VV63 1379 aa20.47■□□□□ 0.87
CXXC1-212ENST00000589940 GOLGA8BA8MQT2 603 aa20.47■□□□□ 0.87
CXXC1-212ENST00000589940 TFAP4Q01664 338 aa20.47■□□□□ 0.87
CXXC1-212ENST00000589940 SCRN1Q12765 414 aa20.47■□□□□ 0.87
CXXC1-212ENST00000589940 NBPF9Q3BBW0 867 aa20.47■□□□□ 0.87
CXXC1-212ENST00000589940 ENAHQ8N8S7 591 aaPredicted RBP20.47■□□□□ 0.87
CXXC1-212ENST00000589940 DDTLA6NHG4 134 aaPredicted RBP20.46■□□□□ 0.87
CXXC1-212ENST00000589940 C9orf131Q5VYM1 1079 aa20.46■□□□□ 0.87
CXXC1-212ENST00000589940 SH3BP5LQ7L8J4 393 aa20.46■□□□□ 0.87
CXXC1-212ENST00000589940 ZSCAN29Q8IWY8 852 aaPredicted RBP20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms