RNA–Protein interactions for RNA: ENST00000589078.1

APOC1-204, Transcript of apolipoprotein C1, humanhuman

TSL 2

Gene APOC1, Length 213 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-204ENST00000589078 TSHZ3Q63HK5 1081 aa11.68□□□□□ -0.54
APOC1-204ENST00000589078 CHRDL2Q6WN34 429 aa11.68□□□□□ -0.54
APOC1-204ENST00000589078 NBPF11Q86T75 865 aa11.68□□□□□ -0.54
APOC1-204ENST00000589078 CHD1LQ86WJ1 897 aa11.68□□□□□ -0.54
APOC1-204ENST00000589078 ANKRD13AQ8IZ07 590 aa11.68□□□□□ -0.54
APOC1-204ENST00000589078 LNPKQ9C0E8 428 aa11.68□□□□□ -0.54
APOC1-204ENST00000589078 CSADQ9Y600 493 aa11.68□□□□□ -0.54
APOC1-204ENST00000589078 ZNF532Q9HCE3 1301 aa11.67□□□□□ -0.54
APOC1-204ENST00000589078 MAGEB6P1A0A0J9YX57 407 aa11.67□□□□□ -0.54
APOC1-204ENST00000589078 USP5P45974 858 aa11.67□□□□□ -0.54
APOC1-204ENST00000589078 MIGA1Q8NAN2 632 aa11.67□□□□□ -0.54
APOC1-204ENST00000589078 SH3RF3Q8TEJ3 882 aaPredicted RBP11.67□□□□□ -0.54
APOC1-204ENST00000589078 EDC3Q96F86 508 aaKnown RBP11.67□□□□□ -0.54
APOC1-204ENST00000589078 ZNF341Q9BYN7 854 aa11.67□□□□□ -0.54
APOC1-204ENST00000589078 ELP3Q9H9T3 547 aa11.67□□□□□ -0.54
APOC1-204ENST00000589078 STAP2Q9UGK3 403 aa11.67□□□□□ -0.54
APOC1-204ENST00000589078 RFX7Q2KHR2 1363 aa11.67□□□□□ -0.54
APOC1-204ENST00000589078 USP2O75604 605 aaPredicted RBP11.66□□□□□ -0.54
APOC1-204ENST00000589078 ZFYP08048 801 aaPredicted RBP11.66□□□□□ -0.54
APOC1-204ENST00000589078 ADD2P35612 726 aa11.66□□□□□ -0.54
APOC1-204ENST00000589078 PDE1AP54750 535 aa11.66□□□□□ -0.54
APOC1-204ENST00000589078 MAP3K9P80192 1104 aa11.66□□□□□ -0.54
APOC1-204ENST00000589078 UBE3CQ15386 1083 aa11.66□□□□□ -0.54
APOC1-204ENST00000589078 ADGRA1Q86SQ6 560 aa11.66□□□□□ -0.54
APOC1-204ENST00000589078 CDAN1Q8IWY9 1227 aa11.66□□□□□ -0.54
APOC1-204ENST00000589078 KBTBD3Q8NAB2 608 aa11.66□□□□□ -0.54
APOC1-204ENST00000589078 OTUD7AQ8TE49 926 aaPredicted RBP11.66□□□□□ -0.54
APOC1-204ENST00000589078 SH3TC2Q8TF17 1288 aa11.66□□□□□ -0.54
APOC1-204ENST00000589078 OPTNQ96CV9 577 aa11.66□□□□□ -0.54
APOC1-204ENST00000589078 MS4A4AQ96JQ5 239 aa11.66□□□□□ -0.54
APOC1-204ENST00000589078 WRNIP1Q96S55 665 aa11.66□□□□□ -0.54
APOC1-204ENST00000589078 CRNKL1Q9BZJ0 848 aaKnown RBP11.66□□□□□ -0.54
APOC1-204ENST00000589078 OSBPL5Q9H0X9 879 aaPredicted RBP11.66□□□□□ -0.54
APOC1-204ENST00000589078 DHX36Q9H2U1 1008 aaKnown RBP11.66□□□□□ -0.54
APOC1-204ENST00000589078 DLL1O00548 723 aa11.65□□□□□ -0.54
APOC1-204ENST00000589078 HLA-DOAP06340 250 aa11.65□□□□□ -0.54
APOC1-204ENST00000589078 DYNLL1P63167 89 aaKnown RBP11.65□□□□□ -0.54
APOC1-204ENST00000589078 ARHGEF6Q15052 776 aa11.65□□□□□ -0.54
APOC1-204ENST00000589078 TAF1CQ15572 869 aaPredicted RBP11.65□□□□□ -0.54
APOC1-204ENST00000589078 MIGA2Q7L4E1 593 aa11.65□□□□□ -0.54
APOC1-204ENST00000589078 ZFPM1Q8IX07 1006 aa11.65□□□□□ -0.54
APOC1-204ENST00000589078 PI4K2BQ8TCG2 481 aa11.65□□□□□ -0.54
APOC1-204ENST00000589078 TGFBRAP1Q8WUH2 860 aa11.65□□□□□ -0.54
APOC1-204ENST00000589078 CNKSR2Q8WXI2 1034 aa11.65□□□□□ -0.54
APOC1-204ENST00000589078 BRI3BPQ8WY22 251 aa11.65□□□□□ -0.54
APOC1-204ENST00000589078 DDRGK1Q96HY6 314 aa11.65□□□□□ -0.54
APOC1-204ENST00000589078 FSD1Q9BTV5 496 aa11.65□□□□□ -0.54
APOC1-204ENST00000589078 TRIM34Q9BYJ4 488 aa11.65□□□□□ -0.54
APOC1-204ENST00000589078 DDX4Q9NQI0 724 aaKnown RBP11.65□□□□□ -0.54
APOC1-204ENST00000589078 RBM27Q9P2N5 1060 aaKnown RBP11.65□□□□□ -0.54
APOC1-204ENST00000589078 ATRNL1Q5VV63 1379 aa11.65□□□□□ -0.55
APOC1-204ENST00000589078 UNC80Q8N2C7 3258 aa11.64□□□□□ -0.55
APOC1-204ENST00000589078 COL2A1P02458 1487 aaPredicted RBP11.64□□□□□ -0.55
APOC1-204ENST00000589078 FLT1P17948 1338 aa11.64□□□□□ -0.55
APOC1-204ENST00000589078 SALL3Q9BXA9 1300 aa11.64□□□□□ -0.55
APOC1-204ENST00000589078 CCL15-CCL14A0A0B4J2E2 113 aa11.64□□□□□ -0.55
APOC1-204ENST00000589078 TCRBV5S4A2TA0A5A2 114 aa11.64□□□□□ -0.55
APOC1-204ENST00000589078 CCL15Q16663 113 aa11.64□□□□□ -0.55
APOC1-204ENST00000589078 MAPKAPK5Q8IW41 473 aa11.64□□□□□ -0.55
APOC1-204ENST00000589078 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.64□□□□□ -0.552e-17■■□□□ 12.8
APOC1-204ENST00000589078 EVI5LQ96CN4 794 aa11.64□□□□□ -0.55
APOC1-204ENST00000589078 RIOK1Q9BRS2 568 aaKnown RBP11.64□□□□□ -0.55
APOC1-204ENST00000589078 ARHGAP39Q9C0H5 1083 aa11.64□□□□□ -0.55
APOC1-204ENST00000589078 ZFYVE28Q9HCC9 887 aa11.64□□□□□ -0.55
APOC1-204ENST00000589078 PI4KBQ9UBF8 816 aa11.64□□□□□ -0.55
APOC1-204ENST00000589078 RNF113AO15541 343 aaKnown RBP11.63□□□□□ -0.55
APOC1-204ENST00000589078 MBD4O95243 580 aa11.63□□□□□ -0.55
APOC1-204ENST00000589078 VGLL4Q14135 290 aa11.63□□□□□ -0.55
APOC1-204ENST00000589078 TICAM2Q86XR7 235 aa11.63□□□□□ -0.55
APOC1-204ENST00000589078 AMOTL1Q8IY63 956 aa11.63□□□□□ -0.55
APOC1-204ENST00000589078 FAM43AQ8N2R8 423 aa11.63□□□□□ -0.55
APOC1-204ENST00000589078 CRACR2BQ8N4Y2 399 aaPredicted RBP11.63□□□□□ -0.55
APOC1-204ENST00000589078 SLC17A8Q8NDX2 589 aa11.63□□□□□ -0.55
APOC1-204ENST00000589078 APPBP2Q92624 585 aa11.63□□□□□ -0.55
APOC1-204ENST00000589078 SHISA4Q96DD7 197 aa11.63□□□□□ -0.55
APOC1-204ENST00000589078 PICK1Q9NRD5 415 aa11.63□□□□□ -0.55
APOC1-204ENST00000589078 HERC5Q9UII4 1024 aaKnown RBP11.63□□□□□ -0.55
APOC1-204ENST00000589078 MAST2Q6P0Q8 1798 aa11.63□□□□□ -0.55
APOC1-204ENST00000589078 DDTLA6NHG4 134 aaPredicted RBP11.62□□□□□ -0.55
APOC1-204ENST00000589078 TRIM6-TRIM34B2RNG4 842 aa11.62□□□□□ -0.55
APOC1-204ENST00000589078 TBC1D12O60347 775 aa11.62□□□□□ -0.55
APOC1-204ENST00000589078 GTF2A2P52657 109 aa11.62□□□□□ -0.55
APOC1-204ENST00000589078 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.62□□□□□ -0.55
APOC1-204ENST00000589078 SH3BP5LQ7L8J4 393 aa11.62□□□□□ -0.55
APOC1-204ENST00000589078 TTC6Q86TZ1 520 aa11.62□□□□□ -0.55
APOC1-204ENST00000589078 ERO1BQ86YB8 467 aa11.62□□□□□ -0.55
APOC1-204ENST00000589078 DPF3Q92784 378 aa11.62□□□□□ -0.55
APOC1-204ENST00000589078 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.62□□□□□ -0.55
APOC1-204ENST00000589078 ATP8A2Q9NTI2 1148 aa11.62□□□□□ -0.55
APOC1-204ENST00000589078 SAP30BPQ9UHR5 308 aaKnown RBP11.62□□□□□ -0.55
APOC1-204ENST00000589078 ZNF112Q9UJU3 913 aa11.62□□□□□ -0.55
APOC1-204ENST00000589078 MYH2Q9UKX2 1941 aa11.62□□□□□ -0.55
APOC1-204ENST00000589078 POLR3DP05423 398 aaPredicted RBP11.61□□□□□ -0.55
APOC1-204ENST00000589078 GNAT2P19087 354 aa11.61□□□□□ -0.55
APOC1-204ENST00000589078 LACTBP83111 547 aaPredicted RBP11.61□□□□□ -0.55
APOC1-204ENST00000589078 MAP3K10Q02779 954 aa11.61□□□□□ -0.55
APOC1-204ENST00000589078 KIF22Q14807 665 aa11.61□□□□□ -0.55
APOC1-204ENST00000589078 CENPQQ7L2Z9 268 aaPredicted RBP11.61□□□□□ -0.55
APOC1-204ENST00000589078 FOXP4Q8IVH2 680 aaPredicted RBP11.61□□□□□ -0.55
APOC1-204ENST00000589078 PLEKHM2Q8IWE5 1019 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms