RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 FGRP09769 529 aa26.24■■□□□ 1.79
ATG4D-209ENST00000588857 SPDYE6P0CI01 402 aa26.24■■□□□ 1.79
ATG4D-209ENST00000588857 ANTXR2P58335 489 aa26.24■■□□□ 1.79
ATG4D-209ENST00000588857 FBXL16Q8N461 479 aa26.24■■□□□ 1.79
ATG4D-209ENST00000588857 RBM46Q8TBY0 533 aaKnown RBP26.24■■□□□ 1.79
ATG4D-209ENST00000588857 IDI2Q9BXS1 227 aa26.24■■□□□ 1.79
ATG4D-209ENST00000588857 TDRD3Q9H7E2 651 aaKnown RBP26.24■■□□□ 1.79
ATG4D-209ENST00000588857 ZSWIM5Q9P217 1185 aa26.24■■□□□ 1.79
ATG4D-209ENST00000588857 TPCN1Q9ULQ1 816 aa26.24■■□□□ 1.79
ATG4D-209ENST00000588857 ROBO3Q96MS0 1386 aa26.24■■□□□ 1.79
ATG4D-209ENST00000588857 TTC6Q86TZ1 520 aa26.23■■□□□ 1.79
ATG4D-209ENST00000588857 MTMR14Q8NCE2 650 aa26.23■■□□□ 1.79
ATG4D-209ENST00000588857 L3MBTL3Q96JM7 780 aaPredicted RBP26.23■■□□□ 1.79
ATG4D-209ENST00000588857 AGXT2Q9BYV1 514 aa26.23■■□□□ 1.79
ATG4D-209ENST00000588857 OSBPL5Q9H0X9 879 aaPredicted RBP26.23■■□□□ 1.79
ATG4D-209ENST00000588857 TMOD2Q9NZR1 351 aa26.23■■□□□ 1.79
ATG4D-209ENST00000588857 ORC4O43929 436 aa26.22■■□□□ 1.79
ATG4D-209ENST00000588857 GMPSP49915 693 aaPredicted RBP26.22■■□□□ 1.79
ATG4D-209ENST00000588857 PLCD1P51178 756 aa26.22■■□□□ 1.79
ATG4D-209ENST00000588857 EVX2Q03828 476 aa26.22■■□□□ 1.79
ATG4D-209ENST00000588857 DPF2Q92785 391 aa26.22■■□□□ 1.79
ATG4D-209ENST00000588857 TMEM87BQ96K49 555 aa26.22■■□□□ 1.79
ATG4D-209ENST00000588857 ZNF287Q9HBT7 754 aa26.22■■□□□ 1.79
ATG4D-209ENST00000588857 FOXD4L1Q9NU39 408 aa26.22■■□□□ 1.79
ATG4D-209ENST00000588857 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.22■■□□□ 1.79
ATG4D-209ENST00000588857 RANBP6O60518 1105 aaKnown RBP26.21■■□□□ 1.79
ATG4D-209ENST00000588857 NPM3O75607 178 aaKnown RBP26.21■■□□□ 1.79
ATG4D-209ENST00000588857 PRDM1O75626 825 aa26.21■■□□□ 1.79
ATG4D-209ENST00000588857 CACNB3P54284 484 aa26.21■■□□□ 1.79
ATG4D-209ENST00000588857 NFIAQ12857 509 aa26.21■■□□□ 1.79
ATG4D-209ENST00000588857 CUL4AQ13619 759 aa26.21■■□□□ 1.79
ATG4D-209ENST00000588857 SART3Q15020 963 aaKnown RBP26.21■■□□□ 1.79
ATG4D-209ENST00000588857 SLKQ9H2G2 1235 aaPredicted RBP26.21■■□□□ 1.79
ATG4D-209ENST00000588857 NT5C2P49902 561 aa26.2■■□□□ 1.79
ATG4D-209ENST00000588857 GPC2Q8N158 579 aa26.2■■□□□ 1.79
ATG4D-209ENST00000588857 NKX2-3Q8TAU0 364 aa26.2■■□□□ 1.79
ATG4D-209ENST00000588857 MKNK2Q9HBH9 465 aa26.2■■□□□ 1.79
ATG4D-209ENST00000588857 MYOZ2Q9NPC6 264 aa26.2■■□□□ 1.79
ATG4D-209ENST00000588857 MYH8P13535 1937 aa26.2■■□□□ 1.79
ATG4D-209ENST00000588857 MYO1BO43795 1136 aa26.2■■□□□ 1.78
ATG4D-209ENST00000588857 ZNF280AP59817 542 aaPredicted RBP26.2■■□□□ 1.78
ATG4D-209ENST00000588857 ME3Q16798 604 aa26.2■■□□□ 1.78
ATG4D-209ENST00000588857 DYNLL2Q96FJ2 89 aa26.2■■□□□ 1.78
ATG4D-209ENST00000588857 ANGEL1Q9UNK9 670 aaKnown RBP26.2■■□□□ 1.78
ATG4D-209ENST00000588857 WDR90Q96KV7 1748 aa26.19■■□□□ 1.78
ATG4D-209ENST00000588857 ERICH2A1L162 156 aa26.19■■□□□ 1.78
ATG4D-209ENST00000588857 IFIT3O14879 490 aaKnown RBP26.19■■□□□ 1.78
ATG4D-209ENST00000588857 LARGE1O95461 756 aa26.19■■□□□ 1.78
ATG4D-209ENST00000588857 HLA-DOAP06340 250 aa26.19■■□□□ 1.78
ATG4D-209ENST00000588857 APOBRQ0VD83 1088 aa26.19■■□□□ 1.78
ATG4D-209ENST00000588857 TCP10Q12799 353 aa26.19■■□□□ 1.78
ATG4D-209ENST00000588857 INTS4Q96HW7 963 aaKnown RBP26.19■■□□□ 1.78
ATG4D-209ENST00000588857 UBAC1Q9BSL1 405 aa26.19■■□□□ 1.78
ATG4D-209ENST00000588857 MTA3Q9BTC8 594 aa26.19■■□□□ 1.78
ATG4D-209ENST00000588857 IQCA1LA6NCM1 817 aa26.18■■□□□ 1.78
ATG4D-209ENST00000588857 FSTL1Q12841 308 aa26.18■■□□□ 1.78
ATG4D-209ENST00000588857 TMEM67Q5HYA8 995 aa26.18■■□□□ 1.78
ATG4D-209ENST00000588857 DHX36Q9H2U1 1008 aaKnown RBP26.18■■□□□ 1.78
ATG4D-209ENST00000588857 GPHNQ9NQX3 736 aaPredicted RBP26.18■■□□□ 1.78
ATG4D-209ENST00000588857 ZNF70Q9UC06 446 aaPredicted RBP26.18■■□□□ 1.78
ATG4D-209ENST00000588857 FAM198AQ9UFP1 575 aa26.18■■□□□ 1.78
ATG4D-209ENST00000588857 CNOT7Q9UIV1 285 aaKnown RBP26.18■■□□□ 1.78
ATG4D-209ENST00000588857 SH2B2O14492 632 aaPredicted RBP26.17■■□□□ 1.78
ATG4D-209ENST00000588857 ENTPD3O75355 529 aa26.17■■□□□ 1.78
ATG4D-209ENST00000588857 C16orf86Q6ZW13 317 aa26.17■■□□□ 1.78
ATG4D-209ENST00000588857 MICALL2Q8IY33 904 aa26.17■■□□□ 1.78
ATG4D-209ENST00000588857 IGDCC4Q8TDY8 1250 aa26.17■■□□□ 1.78
ATG4D-209ENST00000588857 NAP1L2Q9ULW6 460 aaPredicted RBP26.17■■□□□ 1.78
ATG4D-209ENST00000588857 SPDYE2Q495Y8 402 aa26.16■■□□□ 1.78
ATG4D-209ENST00000588857 IQCA1Q86XH1 822 aa26.16■■□□□ 1.78
ATG4D-209ENST00000588857 ZSCAN29Q8IWY8 852 aaPredicted RBP26.16■■□□□ 1.78
ATG4D-209ENST00000588857 ZNF444Q8N0Y2 327 aaPredicted RBP26.16■■□□□ 1.78
ATG4D-209ENST00000588857 SHTN1A0MZ66 631 aa26.16■■□□□ 1.78
ATG4D-209ENST00000588857 CLRN2A0PK11 232 aa26.16■■□□□ 1.78
ATG4D-209ENST00000588857 TSPY2A6NKD2 308 aa26.16■■□□□ 1.78
ATG4D-209ENST00000588857 HSPA6P17066 643 aa26.16■■□□□ 1.78
ATG4D-209ENST00000588857 EVCP57679 992 aa26.16■■□□□ 1.78
ATG4D-209ENST00000588857 STK3Q13188 491 aa26.16■■□□□ 1.78
ATG4D-209ENST00000588857 CCDC83Q8IWF9 413 aa26.16■■□□□ 1.78
ATG4D-209ENST00000588857 ZFPM1Q8IX07 1006 aa26.16■■□□□ 1.78
ATG4D-209ENST00000588857 NECAB1Q8N987 351 aa26.16■■□□□ 1.78
ATG4D-209ENST00000588857 SMC1BQ8NDV3 1235 aa26.16■■□□□ 1.78
ATG4D-209ENST00000588857 ZNF274Q96GC6 653 aaPredicted RBP26.16■■□□□ 1.78
ATG4D-209ENST00000588857 ZBED3Q96IU2 234 aaPredicted RBP26.16■■□□□ 1.78
ATG4D-209ENST00000588857 ZKSCAN3Q9BRR0 538 aa26.16■■□□□ 1.78
ATG4D-209ENST00000588857 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.16■■□□□ 1.78
ATG4D-209ENST00000588857 CDK8P49336 464 aa26.15■■□□□ 1.78
ATG4D-209ENST00000588857 RBM26Q5T8P6 1007 aaKnown RBP26.15■■□□□ 1.78
ATG4D-209ENST00000588857 NFXL1Q6ZNB6 911 aa26.15■■□□□ 1.78
ATG4D-209ENST00000588857 SLC44A5Q8NCS7 719 aa26.15■■□□□ 1.78
ATG4D-209ENST00000588857 TAF1DQ9H5J8 278 aaPredicted RBP26.15■■□□□ 1.78
ATG4D-209ENST00000588857 CWC22Q9HCG8 908 aaKnown RBP26.15■■□□□ 1.78
ATG4D-209ENST00000588857 SERPINB13Q9UIV8 391 aa26.15■■□□□ 1.78
ATG4D-209ENST00000588857 HACL1Q9UJ83 578 aa26.15■■□□□ 1.78
ATG4D-209ENST00000588857 KLF18A0A0U1RQI7 1052 aa26.14■■□□□ 1.78
ATG4D-209ENST00000588857 H7C1D1 291 aa26.14■■□□□ 1.78
ATG4D-209ENST00000588857 WNT10BO00744 389 aa26.14■■□□□ 1.78
ATG4D-209ENST00000588857 LIFRP42702 1097 aa26.14■■□□□ 1.78
ATG4D-209ENST00000588857 WTAPQ15007 396 aa26.14■■□□□ 1.78
ATG4D-209ENST00000588857 FKBP1CQ5VVH2 108 aa26.14■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms