RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 MYH2Q9UKX2 1941 aa12.35□□□□□ -0.43
CHMP1B-202ENST00000588284 RAD17O75943 681 aa12.34□□□□□ -0.43
CHMP1B-202ENST00000588284 USP17L8P0C7I0 530 aa12.34□□□□□ -0.43
CHMP1B-202ENST00000588284 ANTXR2P58335 489 aa12.34□□□□□ -0.43
CHMP1B-202ENST00000588284 TMEM67Q5HYA8 995 aa12.34□□□□□ -0.43
CHMP1B-202ENST00000588284 APOBEC3HQ6NTF7 200 aaKnown RBP12.34□□□□□ -0.43
CHMP1B-202ENST00000588284 CDC42EP5Q6NZY7 148 aa12.34□□□□□ -0.43
CHMP1B-202ENST00000588284 CYB5R4Q7L1T6 521 aa12.34□□□□□ -0.43
CHMP1B-202ENST00000588284 CHST3Q7LGC8 479 aa12.34□□□□□ -0.43
CHMP1B-202ENST00000588284 IQCA1Q86XH1 822 aa12.34□□□□□ -0.43
CHMP1B-202ENST00000588284 MAPKAPK5Q8IW41 473 aa12.34□□□□□ -0.43
CHMP1B-202ENST00000588284 CCDC83Q8IWF9 413 aa12.34□□□□□ -0.43
CHMP1B-202ENST00000588284 ZNF444Q8N0Y2 327 aaPredicted RBP12.34□□□□□ -0.43
CHMP1B-202ENST00000588284 IGDCC4Q8TDY8 1250 aa12.34□□□□□ -0.43
CHMP1B-202ENST00000588284 UBAC1Q9BSL1 405 aa12.34□□□□□ -0.43
CHMP1B-202ENST00000588284 LRRC2Q9BYS8 371 aa12.34□□□□□ -0.43
CHMP1B-202ENST00000588284 MKNK2Q9HBH9 465 aa12.34□□□□□ -0.43
CHMP1B-202ENST00000588284 NFKBIEO00221 500 aa12.33□□□□□ -0.44
CHMP1B-202ENST00000588284 PSMD14O00487 310 aa12.33□□□□□ -0.44
CHMP1B-202ENST00000588284 SH2B2O14492 632 aaPredicted RBP12.33□□□□□ -0.44
CHMP1B-202ENST00000588284 RANBP6O60518 1105 aaKnown RBP12.33□□□□□ -0.44
CHMP1B-202ENST00000588284 PDCP20941 246 aa12.33□□□□□ -0.44
CHMP1B-202ENST00000588284 RPS12P25398 132 aaKnown RBP12.33□□□□□ -0.44
CHMP1B-202ENST00000588284 PDIA3P30101 505 aaKnown RBP12.33□□□□□ -0.44
CHMP1B-202ENST00000588284 EIF6P56537 245 aaKnown RBP12.33□□□□□ -0.44
CHMP1B-202ENST00000588284 CXCL9Q07325 125 aa12.33□□□□□ -0.44
CHMP1B-202ENST00000588284 APOBRQ0VD83 1088 aa12.33□□□□□ -0.44
CHMP1B-202ENST00000588284 WTAPQ15007 396 aa12.33□□□□□ -0.44
CHMP1B-202ENST00000588284 NFXL1Q6ZNB6 911 aa12.33□□□□□ -0.44
CHMP1B-202ENST00000588284 SGMS1Q86VZ5 419 aa12.33□□□□□ -0.44
CHMP1B-202ENST00000588284 NLGN2Q8NFZ4 835 aa12.33□□□□□ -0.44
CHMP1B-202ENST00000588284 GMLQ99445 158 aa12.33□□□□□ -0.44
CHMP1B-202ENST00000588284 IDI2Q9BXS1 227 aa12.33□□□□□ -0.44
CHMP1B-202ENST00000588284 DHX36Q9H2U1 1008 aaKnown RBP12.33□□□□□ -0.44
CHMP1B-202ENST00000588284 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.33□□□□□ -0.44
CHMP1B-202ENST00000588284 KIF3AQ9Y496 699 aa12.33□□□□□ -0.44
CHMP1B-202ENST00000588284 NEDD4P46934 1319 aa12.33□□□□□ -0.44
CHMP1B-202ENST00000588284 CYP2D7A0A087X1C5 515 aa12.32□□□□□ -0.44
CHMP1B-202ENST00000588284 KLF18A0A0U1RQI7 1052 aa12.32□□□□□ -0.44
CHMP1B-202ENST00000588284 CCDC69A6NI79 296 aa12.32□□□□□ -0.44
CHMP1B-202ENST00000588284 LARGE1O95461 756 aa12.32□□□□□ -0.44
CHMP1B-202ENST00000588284 HLA-DOAP06340 250 aa12.32□□□□□ -0.44
CHMP1B-202ENST00000588284 COL9A3Q14050 684 aaPredicted RBP12.32□□□□□ -0.44
CHMP1B-202ENST00000588284 PPP2R5BQ15173 497 aa12.32□□□□□ -0.44
CHMP1B-202ENST00000588284 DLGAP5Q15398 846 aa12.32□□□□□ -0.44
CHMP1B-202ENST00000588284 CFAP100Q494V2 611 aa12.32□□□□□ -0.44
CHMP1B-202ENST00000588284 CPLX2Q6PUV4 134 aaKnown RBP12.32□□□□□ -0.44
CHMP1B-202ENST00000588284 NECAB1Q8N987 351 aa12.32□□□□□ -0.44
CHMP1B-202ENST00000588284 GTF3C6Q969F1 213 aa12.32□□□□□ -0.44
CHMP1B-202ENST00000588284 FHDC1Q9C0D6 1143 aaPredicted RBP12.32□□□□□ -0.44
CHMP1B-202ENST00000588284 TSPYL2Q9H2G4 693 aaPredicted RBP12.32□□□□□ -0.44
CHMP1B-202ENST00000588284 INCENPQ9NQS7 918 aa12.32□□□□□ -0.44
CHMP1B-202ENST00000588284 TMOD2Q9NZR1 351 aa12.32□□□□□ -0.44
CHMP1B-202ENST00000588284 NAP1L2Q9ULW6 460 aaPredicted RBP12.32□□□□□ -0.44
CHMP1B-202ENST00000588284 FLT1P17948 1338 aa12.32□□□□□ -0.44
CHMP1B-202ENST00000588284 TSPY2A6NKD2 308 aa12.31□□□□□ -0.44
CHMP1B-202ENST00000588284 ENTPD3O75355 529 aa12.31□□□□□ -0.44
CHMP1B-202ENST00000588284 WDHD1O75717 1129 aaPredicted RBP12.31□□□□□ -0.44
CHMP1B-202ENST00000588284 CYP2D6P10635 497 aa12.31□□□□□ -0.44
CHMP1B-202ENST00000588284 CD44P16070 742 aaKnown RBP12.31□□□□□ -0.44
CHMP1B-202ENST00000588284 RCAN1P53805 252 aa12.31□□□□□ -0.44
CHMP1B-202ENST00000588284 HMGN5P82970 282 aaKnown RBP12.31□□□□□ -0.44
CHMP1B-202ENST00000588284 STK3Q13188 491 aa12.31□□□□□ -0.44
CHMP1B-202ENST00000588284 RAB3GAP1Q15042 981 aa12.31□□□□□ -0.44
CHMP1B-202ENST00000588284 ARHGAP27Q6ZUM4 889 aa12.31□□□□□ -0.44
CHMP1B-202ENST00000588284 STK11IPQ8N1F8 1099 aa12.31□□□□□ -0.44
CHMP1B-202ENST00000588284 MTMR14Q8NCE2 650 aa12.31□□□□□ -0.44
CHMP1B-202ENST00000588284 ZSCAN10Q96SZ4 725 aaPredicted RBP12.31□□□□□ -0.44
CHMP1B-202ENST00000588284 SWAP70Q9UH65 585 aa12.31□□□□□ -0.44
CHMP1B-202ENST00000588284 SAP30BPQ9UHR5 308 aaKnown RBP12.31□□□□□ -0.44
CHMP1B-202ENST00000588284 SLC12A7Q9Y666 1083 aa12.31□□□□□ -0.44
CHMP1B-202ENST00000588284 TACC3Q9Y6A5 838 aa12.31□□□□□ -0.44
CHMP1B-202ENST00000588284 ROBO3Q96MS0 1386 aa12.3□□□□□ -0.44
CHMP1B-202ENST00000588284 LAMA4Q16363 1823 aa12.3□□□□□ -0.44
CHMP1B-202ENST00000588284 CCDC196A0A1B0GTZ2 297 aa12.3□□□□□ -0.44
CHMP1B-202ENST00000588284 ZBTB43O43298 467 aa12.3□□□□□ -0.44
CHMP1B-202ENST00000588284 MYO1BO43795 1136 aa12.3□□□□□ -0.44
CHMP1B-202ENST00000588284 CALM1P0DP23 149 aa12.3□□□□□ -0.44
CHMP1B-202ENST00000588284 CALM2P0DP24 149 aa12.3□□□□□ -0.44
CHMP1B-202ENST00000588284 CALM3P0DP25 149 aa12.3□□□□□ -0.44
CHMP1B-202ENST00000588284 GJB2P29033 226 aa12.3□□□□□ -0.44
CHMP1B-202ENST00000588284 PLCD1P51178 756 aa12.3□□□□□ -0.44
CHMP1B-202ENST00000588284 PICALMQ13492 652 aa12.3□□□□□ -0.44
CHMP1B-202ENST00000588284 C16orf86Q6ZW13 317 aa12.3□□□□□ -0.44
CHMP1B-202ENST00000588284 DGKHQ86XP1 1220 aa12.3□□□□□ -0.44
CHMP1B-202ENST00000588284 FOXP4Q8IVH2 680 aaPredicted RBP12.3□□□□□ -0.44
CHMP1B-202ENST00000588284 DPF2Q92785 391 aa12.3□□□□□ -0.44
CHMP1B-202ENST00000588284 SYT17Q9BSW7 474 aa12.3□□□□□ -0.44
CHMP1B-202ENST00000588284 OSBPL5Q9H0X9 879 aaPredicted RBP12.3□□□□□ -0.44
CHMP1B-202ENST00000588284 LY9Q9HBG7 655 aa12.3□□□□□ -0.44
CHMP1B-202ENST00000588284 TCP11L1Q9NUJ3 509 aa12.3□□□□□ -0.44
CHMP1B-202ENST00000588284 BRPF3Q9ULD4 1205 aa12.3□□□□□ -0.44
CHMP1B-202ENST00000588284 TIAM2Q8IVF5 1701 aa12.3□□□□□ -0.44
CHMP1B-202ENST00000588284 WDR33Q9C0J8 1336 aaKnown RBP12.3□□□□□ -0.44
CHMP1B-202ENST00000588284 BRCA1P38398 1863 aaKnown RBP12.29□□□□□ -0.44
CHMP1B-202ENST00000588284 FER1L6Q2WGJ9 1857 aa12.29□□□□□ -0.44
CHMP1B-202ENST00000588284 FZD9O00144 591 aa12.29□□□□□ -0.44
CHMP1B-202ENST00000588284 HAX1O00165 279 aa12.29□□□□□ -0.44
CHMP1B-202ENST00000588284 CPLX1O14810 134 aa12.29□□□□□ -0.44
CHMP1B-202ENST00000588284 PRDM1O75626 825 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms