RNA–Protein interactions for RNA: ENST00000588030.5

CIRBP-215, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CIRBP, Length 1,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-215ENST00000588030 SNAPC2Q13487 334 aa23.94■■□□□ 1.42
CIRBP-215ENST00000588030 SMC5Q8IY18 1101 aa23.94■■□□□ 1.42
CIRBP-215ENST00000588030 LAMB1P07942 1786 aa23.94■■□□□ 1.42
CIRBP-215ENST00000588030 TTC41PQ6P2S7 1318 aa23.94■■□□□ 1.42
CIRBP-215ENST00000588030 CCDC85CA6NKD9 419 aa23.94■■□□□ 1.42
CIRBP-215ENST00000588030 ERC2O15083 957 aa23.94■■□□□ 1.42
CIRBP-215ENST00000588030 TBC1D12O60347 775 aa23.94■■□□□ 1.42
CIRBP-215ENST00000588030 KCNH4Q9UQ05 1017 aa23.94■■□□□ 1.42
CIRBP-215ENST00000588030 FLT1P17948 1338 aa23.93■■□□□ 1.42
CIRBP-215ENST00000588030 BTBD19C9JJ37 291 aa23.93■■□□□ 1.42
CIRBP-215ENST00000588030 USP5P45974 858 aa23.93■■□□□ 1.42
CIRBP-215ENST00000588030 SLC4A8Q2Y0W8 1093 aa23.93■■□□□ 1.42
CIRBP-215ENST00000588030 SAP30BPQ9UHR5 308 aaKnown RBP23.93■■□□□ 1.42
CIRBP-215ENST00000588030 TCRBV5S4A2TA0A5A2 114 aa23.92■■□□□ 1.42
CIRBP-215ENST00000588030 FAM196BA6NMK8 535 aa23.92■■□□□ 1.42
CIRBP-215ENST00000588030 ADD2P35612 726 aa23.92■■□□□ 1.42
CIRBP-215ENST00000588030 TMED8Q6PL24 325 aaPredicted RBP23.92■■□□□ 1.42
CIRBP-215ENST00000588030 SCYL3Q8IZE3 742 aa23.92■■□□□ 1.42
CIRBP-215ENST00000588030 PI4K2BQ8TCG2 481 aa23.92■■□□□ 1.42
CIRBP-215ENST00000588030 CTNND1O60716 968 aaKnown RBP23.91■■□□□ 1.42
CIRBP-215ENST00000588030 GLRX3O76003 335 aaKnown RBP23.91■■□□□ 1.42
CIRBP-215ENST00000588030 PTPRAP18433 802 aa23.91■■□□□ 1.42
CIRBP-215ENST00000588030 RIOK1Q9BRS2 568 aaKnown RBP23.91■■□□□ 1.42
CIRBP-215ENST00000588030 MOGSQ13724 837 aa23.9■■□□□ 1.42
CIRBP-215ENST00000588030 TAF1CQ15572 869 aaPredicted RBP23.9■■□□□ 1.42
CIRBP-215ENST00000588030 CERS3Q8IU89 383 aa23.9■■□□□ 1.42
CIRBP-215ENST00000588030 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.9■■□□□ 1.421e-6■■□□□ 11.4
CIRBP-215ENST00000588030 PALD1Q9ULE6 856 aa23.9■■□□□ 1.42
CIRBP-215ENST00000588030 ZHX2Q9Y6X8 837 aa23.9■■□□□ 1.42
CIRBP-215ENST00000588030 CDK5RAP2Q96SN8 1893 aa23.9■■□□□ 1.42
CIRBP-215ENST00000588030 PKN2Q16513 984 aaKnown RBP23.89■■□□□ 1.42
CIRBP-215ENST00000588030 ZSCAN25Q6NSZ9 544 aa23.89■■□□□ 1.42
CIRBP-215ENST00000588030 LCORLQ8N3X6 602 aa23.89■■□□□ 1.42
CIRBP-215ENST00000588030 ZFYVE28Q9HCC9 887 aa23.89■■□□□ 1.42
CIRBP-215ENST00000588030 PICK1Q9NRD5 415 aa23.89■■□□□ 1.42
CIRBP-215ENST00000588030 SALL3Q9BXA9 1300 aa23.89■■□□□ 1.42
CIRBP-215ENST00000588030 COL2A1P02458 1487 aaPredicted RBP23.89■■□□□ 1.42
CIRBP-215ENST00000588030 CXCL11O14625 94 aa23.89■■□□□ 1.41
CIRBP-215ENST00000588030 NUCB1Q02818 461 aa23.89■■□□□ 1.41
CIRBP-215ENST00000588030 CHD1LQ86WJ1 897 aa23.89■■□□□ 1.41
CIRBP-215ENST00000588030 KBTBD3Q8NAB2 608 aa23.89■■□□□ 1.41
CIRBP-215ENST00000588030 ARMT1Q9H993 441 aa23.89■■□□□ 1.41
CIRBP-215ENST00000588030 ZCCHC17Q9NP64 241 aaKnown RBP23.89■■□□□ 1.41
CIRBP-215ENST00000588030 PI4KBQ9UBF8 816 aa23.89■■□□□ 1.41
CIRBP-215ENST00000588030 MBD4O95243 580 aa23.88■■□□□ 1.41
CIRBP-215ENST00000588030 PDE1AP54750 535 aa23.88■■□□□ 1.41
CIRBP-215ENST00000588030 RRP1BQ14684 758 aaKnown RBP23.88■■□□□ 1.41
CIRBP-215ENST00000588030 CRNKL1Q9BZJ0 848 aaKnown RBP23.88■■□□□ 1.41
CIRBP-215ENST00000588030 DHX36Q9H2U1 1008 aaKnown RBP23.88■■□□□ 1.41
CIRBP-215ENST00000588030 AFG3L2Q9Y4W6 797 aa23.88■■□□□ 1.41
CIRBP-215ENST00000588030 MYH7P12883 1935 aa23.87■■□□□ 1.41
CIRBP-215ENST00000588030 CAP1Q01518 475 aa23.87■■□□□ 1.41
CIRBP-215ENST00000588030 SP3Q02447 781 aa23.87■■□□□ 1.41
CIRBP-215ENST00000588030 UBE3CQ15386 1083 aa23.87■■□□□ 1.41
CIRBP-215ENST00000588030 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.87■■□□□ 1.41
CIRBP-215ENST00000588030 FOCADQ5VW36 1801 aa23.87■■□□□ 1.41
CIRBP-215ENST00000588030 ANKRD23Q86SG2 305 aa23.86■■□□□ 1.41
CIRBP-215ENST00000588030 METTL16Q86W50 562 aaKnown RBP23.86■■□□□ 1.41
CIRBP-215ENST00000588030 SDR42E1Q8WUS8 393 aa23.86■■□□□ 1.41
CIRBP-215ENST00000588030 FSD1Q9BTV5 496 aa23.86■■□□□ 1.41
CIRBP-215ENST00000588030 TRIM34Q9BYJ4 488 aa23.86■■□□□ 1.41
CIRBP-215ENST00000588030 HLA-DOAP06340 250 aa23.85■■□□□ 1.41
CIRBP-215ENST00000588030 CCDC84Q86UT8 332 aaPredicted RBP23.85■■□□□ 1.41
CIRBP-215ENST00000588030 FOXP4Q8IVH2 680 aaPredicted RBP23.85■■□□□ 1.41
CIRBP-215ENST00000588030 CRACR2BQ8N4Y2 399 aaPredicted RBP23.85■■□□□ 1.41
CIRBP-215ENST00000588030 CD99L2Q8TCZ2 262 aa23.85■■□□□ 1.41
CIRBP-215ENST00000588030 PUS7LQ9H0K6 701 aaKnown RBP23.85■■□□□ 1.41
CIRBP-215ENST00000588030 STAP2Q9UGK3 403 aa23.85■■□□□ 1.41
CIRBP-215ENST00000588030 HERC5Q9UII4 1024 aaKnown RBP23.85■■□□□ 1.41
CIRBP-215ENST00000588030 HPS5Q9UPZ3 1129 aa23.85■■□□□ 1.41
CIRBP-215ENST00000588030 TLR2O60603 784 aa23.84■■□□□ 1.41
CIRBP-215ENST00000588030 GPAT2Q6NUI2 795 aa23.84■■□□□ 1.41
CIRBP-215ENST00000588030 OTOP1Q7RTM1 612 aa23.84■■□□□ 1.41
CIRBP-215ENST00000588030 ERO1AQ96HE7 468 aa23.84■■□□□ 1.41
CIRBP-215ENST00000588030 TRIM17Q9Y577 477 aa23.84■■□□□ 1.41
CIRBP-215ENST00000588030 A0A0G2JLL6 359 aaPredicted RBP23.84■■□□□ 1.41
CIRBP-215ENST00000588030 PDHXO00330 501 aa23.84■■□□□ 1.41
CIRBP-215ENST00000588030 RNF113AO15541 343 aaKnown RBP23.84■■□□□ 1.41
CIRBP-215ENST00000588030 PRKAB2O43741 272 aa23.84■■□□□ 1.41
CIRBP-215ENST00000588030 CAP2P40123 477 aa23.84■■□□□ 1.41
CIRBP-215ENST00000588030 FBXO46Q6PJ61 603 aaPredicted RBP23.84■■□□□ 1.41
CIRBP-215ENST00000588030 PRRT2Q7Z6L0 340 aaPredicted RBP23.84■■□□□ 1.41
CIRBP-215ENST00000588030 MYH1P12882 1939 aa23.83■■□□□ 1.41
CIRBP-215ENST00000588030 DNAJC18Q9H819 358 aa23.83■■□□□ 1.41
CIRBP-215ENST00000588030 MCM9Q9NXL9 1143 aa23.83■■□□□ 1.41
CIRBP-215ENST00000588030 POLR3DP05423 398 aaPredicted RBP23.82■■□□□ 1.4
CIRBP-215ENST00000588030 JAG1P78504 1218 aa23.81■■□□□ 1.4
CIRBP-215ENST00000588030 LRRFIP1Q32MZ4 808 aaKnown RBP23.81■■□□□ 1.4
CIRBP-215ENST00000588030 PLEKHM2Q8IWE5 1019 aa23.81■■□□□ 1.4
CIRBP-215ENST00000588030 APPBP2Q92624 585 aa23.81■■□□□ 1.4
CIRBP-215ENST00000588030 SLC4A4Q9Y6R1 1079 aa23.81■■□□□ 1.4
CIRBP-215ENST00000588030 TRIM75PA6NK02 468 aa23.8■■□□□ 1.4
CIRBP-215ENST00000588030 ZFYP08048 801 aaPredicted RBP23.8■■□□□ 1.4
CIRBP-215ENST00000588030 C17orf99Q6UX52 265 aa23.8■■□□□ 1.4
CIRBP-215ENST00000588030 FASTKD5Q7L8L6 764 aaKnown RBP23.8■■□□□ 1.4
CIRBP-215ENST00000588030 OSBP2Q969R2 916 aa23.8■■□□□ 1.4
CIRBP-215ENST00000588030 EFCC1Q9HA90 598 aa23.8■■□□□ 1.4
CIRBP-215ENST00000588030 DCP1AQ9NPI6 582 aaPredicted RBP23.8■■□□□ 1.4
CIRBP-215ENST00000588030 SIPA1L1O43166 1804 aa23.8■■□□□ 1.4
CIRBP-215ENST00000588030 TRIM6-TRIM34B2RNG4 842 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms