RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 ZBTB7BO15156 539 aaPredicted RBP9.6□□□□□ -0.87
VMP1-204ENST00000587259 WDHD1O75717 1129 aaPredicted RBP9.6□□□□□ -0.87
VMP1-204ENST00000587259 SLC5A1P13866 664 aa9.6□□□□□ -0.87
VMP1-204ENST00000587259 ADORA1P30542 326 aa9.6□□□□□ -0.87
VMP1-204ENST00000587259 PHKA1P46020 1223 aa9.6□□□□□ -0.87
VMP1-204ENST00000587259 PSEN1P49768 467 aa9.6□□□□□ -0.87
VMP1-204ENST00000587259 POTEGQ6S5H5 508 aa9.6□□□□□ -0.87
VMP1-204ENST00000587259 GADL1Q6ZQY3 521 aa9.6□□□□□ -0.87
VMP1-204ENST00000587259 UBE2Q1Q7Z7E8 422 aa9.6□□□□□ -0.87
VMP1-204ENST00000587259 ZNF112Q9UJU3 913 aa9.6□□□□□ -0.87
VMP1-204ENST00000587259 TAOK2Q9UL54 1235 aa9.6□□□□□ -0.87
VMP1-204ENST00000587259 HDAC5Q9UQL6 1122 aa9.6□□□□□ -0.87
VMP1-204ENST00000587259 RPAP1Q9BWH6 1393 aaPredicted RBP9.6□□□□□ -0.87
VMP1-204ENST00000587259 MAST3O60307 1309 aa9.59□□□□□ -0.87
VMP1-204ENST00000587259 AK9Q5TCS8 1911 aa9.59□□□□□ -0.87
VMP1-204ENST00000587259 PHF20L1A8MW92 1017 aa9.59□□□□□ -0.87
VMP1-204ENST00000587259 SOX1O00570 391 aaPredicted RBP9.59□□□□□ -0.87
VMP1-204ENST00000587259 BCRP11274 1271 aa9.59□□□□□ -0.87
VMP1-204ENST00000587259 GJA8P48165 433 aa9.59□□□□□ -0.87
VMP1-204ENST00000587259 RGS3P49796 1198 aa9.59□□□□□ -0.87
VMP1-204ENST00000587259 FKBP1CQ5VVH2 108 aa9.59□□□□□ -0.87
VMP1-204ENST00000587259 MRIQ9BWK5 157 aa9.59□□□□□ -0.87
VMP1-204ENST00000587259 OCEL1Q9H607 264 aa9.59□□□□□ -0.87
VMP1-204ENST00000587259 ZCCHC17Q9NP64 241 aaKnown RBP9.59□□□□□ -0.87
VMP1-204ENST00000587259 DDX4Q9NQI0 724 aaKnown RBP9.59□□□□□ -0.87
VMP1-204ENST00000587259 TNNQ9UQP3 1299 aa9.59□□□□□ -0.87
VMP1-204ENST00000587259 PCDHB15Q9Y5E8 787 aa9.59□□□□□ -0.87
VMP1-204ENST00000587259 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.59□□□□□ -0.87
VMP1-204ENST00000587259 ZHX2Q9Y6X8 837 aa9.59□□□□□ -0.87
VMP1-204ENST00000587259 ATRNL1Q5VV63 1379 aa9.59□□□□□ -0.87
VMP1-204ENST00000587259 DDTLA6NHG4 134 aaPredicted RBP9.58□□□□□ -0.88
VMP1-204ENST00000587259 TRIM75PA6NK02 468 aa9.58□□□□□ -0.88
VMP1-204ENST00000587259 PEX10O60683 326 aa9.58□□□□□ -0.88
VMP1-204ENST00000587259 HMMRO75330 724 aa9.58□□□□□ -0.88
VMP1-204ENST00000587259 LDHBP07195 334 aaKnown RBP9.58□□□□□ -0.88
VMP1-204ENST00000587259 GJB1P08034 283 aa9.58□□□□□ -0.88
VMP1-204ENST00000587259 GNAI3P08754 354 aa9.58□□□□□ -0.88
VMP1-204ENST00000587259 PTPRAP18433 802 aa9.58□□□□□ -0.88
VMP1-204ENST00000587259 PICALMQ13492 652 aa9.58□□□□□ -0.88
VMP1-204ENST00000587259 ATP2B3Q16720 1220 aa9.58□□□□□ -0.88
VMP1-204ENST00000587259 NOL9Q5SY16 702 aaKnown RBP9.58□□□□□ -0.88
VMP1-204ENST00000587259 RPAP2Q8IXW5 612 aaPredicted RBP9.58□□□□□ -0.88
VMP1-204ENST00000587259 SMC5Q8IY18 1101 aa9.58□□□□□ -0.88
VMP1-204ENST00000587259 WDR66Q8TBY9 1149 aa9.58□□□□□ -0.88
VMP1-204ENST00000587259 DIS3LQ8TF46 1054 aaKnown RBP9.58□□□□□ -0.88
VMP1-204ENST00000587259 U2AF1L4Q8WU68 220 aaKnown RBP9.58□□□□□ -0.88
VMP1-204ENST00000587259 LPIN2Q92539 896 aa9.58□□□□□ -0.88
VMP1-204ENST00000587259 HOOK2Q96ED9 719 aa9.58□□□□□ -0.88
VMP1-204ENST00000587259 LRCH3Q96II8 777 aa9.58□□□□□ -0.88
VMP1-204ENST00000587259 MYH13Q9UKX3 1938 aa9.57□□□□□ -0.88
VMP1-204ENST00000587259 ADCY3O60266 1144 aa9.57□□□□□ -0.88
VMP1-204ENST00000587259 EIF5BO60841 1220 aaKnown RBP9.57□□□□□ -0.88
VMP1-204ENST00000587259 FARP2O94887 1054 aaPredicted RBP9.57□□□□□ -0.88
VMP1-204ENST00000587259 GNRH1P01148 92 aa9.57□□□□□ -0.88
VMP1-204ENST00000587259 IGHDP01880 384 aa9.57□□□□□ -0.88
VMP1-204ENST00000587259 INHAP05111 366 aa9.57□□□□□ -0.88
VMP1-204ENST00000587259 FLT3LGP49771 235 aa9.57□□□□□ -0.88
VMP1-204ENST00000587259 FCGRTP55899 365 aa9.57□□□□□ -0.88
VMP1-204ENST00000587259 TREML2Q5T2D2 321 aa9.57□□□□□ -0.88
VMP1-204ENST00000587259 ZSCAN29Q8IWY8 852 aaPredicted RBP9.57□□□□□ -0.88
VMP1-204ENST00000587259 SCYL3Q8IZE3 742 aa9.57□□□□□ -0.88
VMP1-204ENST00000587259 ANKRD13CQ8N6S4 541 aa9.57□□□□□ -0.88
VMP1-204ENST00000587259 PARK7Q99497 189 aaKnown RBP9.57□□□□□ -0.88
VMP1-204ENST00000587259 PRO3102Q9H379 93 aa9.57□□□□□ -0.88
VMP1-204ENST00000587259 SUGT1Q9Y2Z0 365 aa9.57□□□□□ -0.88
VMP1-204ENST00000587259 AFG3L2Q9Y4W6 797 aa9.57□□□□□ -0.88
VMP1-204ENST00000587259 A0A0G2JLL6 359 aaPredicted RBP9.56□□□□□ -0.88
VMP1-204ENST00000587259 HOXD10P28358 340 aa9.56□□□□□ -0.88
VMP1-204ENST00000587259 PRMT2P55345 433 aa9.56□□□□□ -0.88
VMP1-204ENST00000587259 TIMM10P62072 90 aa9.56□□□□□ -0.88
VMP1-204ENST00000587259 TRIM32Q13049 653 aa9.56□□□□□ -0.88
VMP1-204ENST00000587259 RASGRF1Q13972 1273 aa9.56□□□□□ -0.88
VMP1-204ENST00000587259 PI16Q6UXB8 463 aa9.56□□□□□ -0.88
VMP1-204ENST00000587259 PRRT2Q7Z6L0 340 aaPredicted RBP9.56□□□□□ -0.88
VMP1-204ENST00000587259 ZNF384Q8TF68 577 aa9.56□□□□□ -0.88
VMP1-204ENST00000587259 DEFB118Q96PH6 123 aa9.56□□□□□ -0.88
VMP1-204ENST00000587259 PICK1Q9NRD5 415 aa9.56□□□□□ -0.88
VMP1-204ENST00000587259 ABCF2Q9UG63 623 aa9.56□□□□□ -0.88
VMP1-204ENST00000587259 STAP2Q9UGK3 403 aa9.56□□□□□ -0.88
VMP1-204ENST00000587259 RBM19Q9Y4C8 960 aaKnown RBP9.56□□□□□ -0.88
VMP1-204ENST00000587259 LRRFIP2Q9Y608 721 aaKnown RBP9.56□□□□□ -0.88
VMP1-204ENST00000587259 RFX7Q2KHR2 1363 aa9.55□□□□□ -0.88
VMP1-204ENST00000587259 CXCL11O14625 94 aa9.55□□□□□ -0.88
VMP1-204ENST00000587259 TNPO2O14787 897 aaKnown RBP9.55□□□□□ -0.88
VMP1-204ENST00000587259 SGPL1O95470 568 aa9.55□□□□□ -0.88
VMP1-204ENST00000587259 TFRCP02786 760 aaKnown RBP9.55□□□□□ -0.88
VMP1-204ENST00000587259 BTDP43251 543 aa9.55□□□□□ -0.88
VMP1-204ENST00000587259 UBXN2AP68543 259 aa9.55□□□□□ -0.88
VMP1-204ENST00000587259 RRP1BQ14684 758 aaKnown RBP9.55□□□□□ -0.88
VMP1-204ENST00000587259 SHROOM1Q2M3G4 852 aaPredicted RBP9.55□□□□□ -0.88
VMP1-204ENST00000587259 CCDC102BQ68D86 513 aa9.55□□□□□ -0.88
VMP1-204ENST00000587259 SLAIN1Q8ND83 568 aa9.55□□□□□ -0.88
VMP1-204ENST00000587259 CEP126Q9P2H0 1117 aa9.55□□□□□ -0.88
VMP1-204ENST00000587259 LAMA3Q16787 3333 aa9.55□□□□□ -0.88
VMP1-204ENST00000587259 MGAMO43451 1857 aa9.55□□□□□ -0.88
VMP1-204ENST00000587259 DOCK2Q92608 1830 aa9.54□□□□□ -0.88
VMP1-204ENST00000587259 EVI5O60447 810 aa9.54□□□□□ -0.88
VMP1-204ENST00000587259 GNAI2P04899 355 aa9.54□□□□□ -0.88
VMP1-204ENST00000587259 UBTFL1P0CB47 393 aaPredicted RBP9.54□□□□□ -0.88
VMP1-204ENST00000587259 ANP32AP39687 249 aaKnown RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms