RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 BRI3BPQ8WY22 251 aa17.92■□□□□ 0.46
ATG4D-207ENST00000587256 MS4A4AQ96JQ5 239 aa17.92■□□□□ 0.46
ATG4D-207ENST00000587256 CRNKL1Q9BZJ0 848 aaKnown RBP17.92■□□□□ 0.46
ATG4D-207ENST00000587256 PI4KBQ9UBF8 816 aa17.92■□□□□ 0.46
ATG4D-207ENST00000587256 HERC5Q9UII4 1024 aaKnown RBP17.92■□□□□ 0.46
ATG4D-207ENST00000587256 PALD1Q9ULE6 856 aa17.92■□□□□ 0.46
ATG4D-207ENST00000587256 NAV1Q8NEY1 1877 aa17.91■□□□□ 0.46
ATG4D-207ENST00000587256 TCRBV5S4A2TA0A5A2 114 aa17.91■□□□□ 0.46
ATG4D-207ENST00000587256 TESPA1A2RU30 521 aaPredicted RBP17.91■□□□□ 0.46
ATG4D-207ENST00000587256 CETPP11597 493 aa17.91■□□□□ 0.46
ATG4D-207ENST00000587256 MAP3K10Q02779 954 aa17.91■□□□□ 0.46
ATG4D-207ENST00000587256 MYH7P12883 1935 aa17.91■□□□□ 0.46
ATG4D-207ENST00000587256 SIPA1L1O43166 1804 aa17.91■□□□□ 0.46
ATG4D-207ENST00000587256 CTNND1O60716 968 aaKnown RBP17.9■□□□□ 0.46
ATG4D-207ENST00000587256 GLRX3O76003 335 aaKnown RBP17.9■□□□□ 0.46
ATG4D-207ENST00000587256 MBD4O95243 580 aa17.9■□□□□ 0.46
ATG4D-207ENST00000587256 LCORLQ8N3X6 602 aa17.9■□□□□ 0.46
ATG4D-207ENST00000587256 ARMT1Q9H993 441 aa17.9■□□□□ 0.46
ATG4D-207ENST00000587256 CASP8AP2Q9UKL3 1982 aa17.9■□□□□ 0.46
ATG4D-207ENST00000587256 DDX60LQ5H9U9 1706 aaKnown RBP17.89■□□□□ 0.46
ATG4D-207ENST00000587256 UBE3CQ15386 1083 aa17.89■□□□□ 0.45
ATG4D-207ENST00000587256 SLFNL1Q499Z3 407 aa17.89■□□□□ 0.45
ATG4D-207ENST00000587256 PTPN18Q99952 460 aa17.89■□□□□ 0.45
ATG4D-207ENST00000587256 CFHR5Q9BXR6 569 aa17.89■□□□□ 0.45
ATG4D-207ENST00000587256 ZHX2Q9Y6X8 837 aa17.89■□□□□ 0.45
ATG4D-207ENST00000587256 MYH1P12882 1939 aa17.89■□□□□ 0.45
ATG4D-207ENST00000587256 PTPRAP18433 802 aa17.88■□□□□ 0.45
ATG4D-207ENST00000587256 KBTBD3Q8NAB2 608 aa17.88■□□□□ 0.45
ATG4D-207ENST00000587256 PI4K2BQ8TCG2 481 aa17.88■□□□□ 0.45
ATG4D-207ENST00000587256 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.88■□□□□ 0.45
ATG4D-207ENST00000587256 KCNH4Q9UQ05 1017 aa17.88■□□□□ 0.45
ATG4D-207ENST00000587256 GPR25O00155 361 aa17.87■□□□□ 0.45
ATG4D-207ENST00000587256 CHGBP05060 677 aa17.87■□□□□ 0.45
ATG4D-207ENST00000587256 CRHR2Q13324 411 aa17.87■□□□□ 0.45
ATG4D-207ENST00000587256 TAF1CQ15572 869 aaPredicted RBP17.87■□□□□ 0.45
ATG4D-207ENST00000587256 B4GALNT3Q6L9W6 998 aa17.87■□□□□ 0.45
ATG4D-207ENST00000587256 TTC6Q86TZ1 520 aa17.87■□□□□ 0.45
ATG4D-207ENST00000587256 FOXP4Q8IVH2 680 aaPredicted RBP17.87■□□□□ 0.45
ATG4D-207ENST00000587256 FAM43AQ8N2R8 423 aa17.87■□□□□ 0.45
ATG4D-207ENST00000587256 SDR42E1Q8WUS8 393 aa17.87■□□□□ 0.45
ATG4D-207ENST00000587256 ZNF296Q8WUU4 475 aaPredicted RBP17.87■□□□□ 0.45
ATG4D-207ENST00000587256 LNPKQ9C0E8 428 aa17.87■□□□□ 0.45
ATG4D-207ENST00000587256 DNAJC18Q9H819 358 aa17.87■□□□□ 0.45
ATG4D-207ENST00000587256 ATAD5Q96QE3 1844 aa17.86■□□□□ 0.45
ATG4D-207ENST00000587256 POLR3DP05423 398 aaPredicted RBP17.86■□□□□ 0.45
ATG4D-207ENST00000587256 LRRFIP1Q32MZ4 808 aaKnown RBP17.86■□□□□ 0.45
ATG4D-207ENST00000587256 CCDC84Q86UT8 332 aaPredicted RBP17.86■□□□□ 0.45
ATG4D-207ENST00000587256 SMC5Q8IY18 1101 aa17.86■□□□□ 0.45
ATG4D-207ENST00000587256 FSD1Q9BTV5 496 aa17.86■□□□□ 0.45
ATG4D-207ENST00000587256 R3HDMLQ9H3Y0 253 aa17.86■□□□□ 0.45
ATG4D-207ENST00000587256 MCM9Q9NXL9 1143 aa17.86■□□□□ 0.45
ATG4D-207ENST00000587256 SERPINB13Q9UIV8 391 aa17.86■□□□□ 0.45
ATG4D-207ENST00000587256 SALL3Q9BXA9 1300 aa17.86■□□□□ 0.45
ATG4D-207ENST00000587256 TRIM75PA6NK02 468 aa17.85■□□□□ 0.45
ATG4D-207ENST00000587256 BTBD19C9JJ37 291 aa17.85■□□□□ 0.45
ATG4D-207ENST00000587256 CXCL11O14625 94 aa17.85■□□□□ 0.45
ATG4D-207ENST00000587256 FKTNO75072 461 aa17.85■□□□□ 0.45
ATG4D-207ENST00000587256 IGHDP01880 384 aa17.85■□□□□ 0.45
ATG4D-207ENST00000587256 ZFYP08048 801 aaPredicted RBP17.85■□□□□ 0.45
ATG4D-207ENST00000587256 CAP2P40123 477 aa17.85■□□□□ 0.45
ATG4D-207ENST00000587256 DGKZQ13574 1117 aa17.85■□□□□ 0.45
ATG4D-207ENST00000587256 NOM1Q5C9Z4 860 aaKnown RBP17.85■□□□□ 0.45
ATG4D-207ENST00000587256 DDRGK1Q96HY6 314 aa17.85■□□□□ 0.45
ATG4D-207ENST00000587256 EHD4Q9H223 541 aa17.85■□□□□ 0.45
ATG4D-207ENST00000587256 RNF113AO15541 343 aaKnown RBP17.84■□□□□ 0.45
ATG4D-207ENST00000587256 PRKAB2O43741 272 aa17.84■□□□□ 0.45
ATG4D-207ENST00000587256 GDF11O95390 407 aa17.84■□□□□ 0.45
ATG4D-207ENST00000587256 RRP1BQ14684 758 aaKnown RBP17.84■□□□□ 0.45
ATG4D-207ENST00000587256 METTL16Q86W50 562 aaKnown RBP17.84■□□□□ 0.45
ATG4D-207ENST00000587256 APPBP2Q92624 585 aa17.84■□□□□ 0.45
ATG4D-207ENST00000587256 PUS7LQ9H0K6 701 aaKnown RBP17.84■□□□□ 0.45
ATG4D-207ENST00000587256 ZFYVE28Q9HCC9 887 aa17.84■□□□□ 0.45
ATG4D-207ENST00000587256 ZCCHC17Q9NP64 241 aaKnown RBP17.84■□□□□ 0.45
ATG4D-207ENST00000587256 DCP1AQ9NPI6 582 aaPredicted RBP17.84■□□□□ 0.45
ATG4D-207ENST00000587256 A0A0G2JLL6 359 aaPredicted RBP17.83■□□□□ 0.44
ATG4D-207ENST00000587256 ASNSP08243 561 aa17.83■□□□□ 0.44
ATG4D-207ENST00000587256 PDE1AP54750 535 aa17.83■□□□□ 0.44
ATG4D-207ENST00000587256 IFFO2Q5TF58 517 aa17.83■□□□□ 0.44
ATG4D-207ENST00000587256 GADL1Q6ZQY3 521 aa17.83■□□□□ 0.44
ATG4D-207ENST00000587256 PRRT2Q7Z6L0 340 aaPredicted RBP17.83■□□□□ 0.44
ATG4D-207ENST00000587256 CTU1Q7Z7A3 348 aaKnown RBP17.83■□□□□ 0.44
ATG4D-207ENST00000587256 ANKRD23Q86SG2 305 aa17.83■□□□□ 0.44
ATG4D-207ENST00000587256 AMOTL1Q8IY63 956 aa17.83■□□□□ 0.44
ATG4D-207ENST00000587256 TBC1D2Q9BYX2 928 aa17.83■□□□□ 0.44
ATG4D-207ENST00000587256 MCOLN1Q9GZU1 580 aa17.83■□□□□ 0.44
ATG4D-207ENST00000587256 AS3MTQ9HBK9 375 aa17.83■□□□□ 0.44
ATG4D-207ENST00000587256 ATP8A2Q9NTI2 1148 aa17.83■□□□□ 0.44
ATG4D-207ENST00000587256 AFG3L2Q9Y4W6 797 aa17.83■□□□□ 0.44
ATG4D-207ENST00000587256 SLC4A4Q9Y6R1 1079 aa17.83■□□□□ 0.44
ATG4D-207ENST00000587256 PHIPQ8WWQ0 1821 aa17.83■□□□□ 0.44
ATG4D-207ENST00000587256 USP17L5A8MUK1 530 aa17.82■□□□□ 0.44
ATG4D-207ENST00000587256 CAPN15O75808 1086 aa17.82■□□□□ 0.44
ATG4D-207ENST00000587256 FASTKD5Q7L8L6 764 aaKnown RBP17.82■□□□□ 0.44
ATG4D-207ENST00000587256 CHD1LQ86WJ1 897 aa17.82■□□□□ 0.44
ATG4D-207ENST00000587256 STAP2Q9UGK3 403 aa17.82■□□□□ 0.44
ATG4D-207ENST00000587256 ZBTB21Q9ULJ3 1066 aa17.82■□□□□ 0.44
ATG4D-207ENST00000587256 PDHXO00330 501 aa17.81■□□□□ 0.44
ATG4D-207ENST00000587256 CYP2D6P10635 497 aa17.81■□□□□ 0.44
ATG4D-207ENST00000587256 PLCD1P51178 756 aa17.81■□□□□ 0.44
ATG4D-207ENST00000587256 NUCB1Q02818 461 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms