RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 GNAT2P19087 354 aa15.06■□□□□ 0
VMP1-202ENST00000585847 HSPA4P34932 840 aa15.06■□□□□ 0
VMP1-202ENST00000585847 MCM2P49736 904 aa15.06■□□□□ 0
VMP1-202ENST00000585847 KRT32Q14532 448 aa15.06■□□□□ 0
VMP1-202ENST00000585847 SULF1Q8IWU6 871 aa15.06■□□□□ 0
VMP1-202ENST00000585847 SNX21Q969T3 373 aa15.06■□□□□ 0
VMP1-202ENST00000585847 LSG1Q9H089 658 aaKnown RBP15.06■□□□□ 0
VMP1-202ENST00000585847 DCP1AQ9NPI6 582 aaPredicted RBP15.06■□□□□ 0
VMP1-202ENST00000585847 CTNNA3Q9UI47 895 aa15.06■□□□□ 0
VMP1-202ENST00000585847 U3KPZ7 1027 aaPredicted RBP15.06■□□□□ 0
VMP1-202ENST00000585847 ZMYM6O95789 1325 aa15.06■□□□□ 0
VMP1-202ENST00000585847 ST18O60284 1047 aa15.05■□□□□ -0
VMP1-202ENST00000585847 NT5C2P49902 561 aa15.05■□□□□ -0
VMP1-202ENST00000585847 NBPF12Q5TAG4 269 aaPredicted RBP15.05■□□□□ -0
VMP1-202ENST00000585847 CYP4F22Q6NT55 531 aa15.05■□□□□ -0
VMP1-202ENST00000585847 MAP4K1Q92918 833 aa15.05■□□□□ -0
VMP1-202ENST00000585847 CDCA5Q96FF9 252 aa15.05■□□□□ -0
VMP1-202ENST00000585847 CRNKL1Q9BZJ0 848 aaKnown RBP15.05■□□□□ -0
VMP1-202ENST00000585847 TMOD2Q9NZR1 351 aa15.05■□□□□ -0
VMP1-202ENST00000585847 PPP2R3BQ9Y5P8 575 aa15.05■□□□□ -0
VMP1-202ENST00000585847 SLC4A4Q9Y6R1 1079 aa15.05■□□□□ -0
VMP1-202ENST00000585847 THSD7BQ9C0I4 1608 aa15.05■□□□□ -0
VMP1-202ENST00000585847 PAPPA2Q9BXP8 1791 aa15.05■□□□□ -0
VMP1-202ENST00000585847 PATL2C9JE40 543 aaKnown RBP15.04■□□□□ -0
VMP1-202ENST00000585847 TNFAIP1Q13829 316 aa15.04■□□□□ -0
VMP1-202ENST00000585847 KCNB2Q92953 911 aa15.04■□□□□ -0
VMP1-202ENST00000585847 TM6SF1Q9BZW5 370 aa15.04■□□□□ -0
VMP1-202ENST00000585847 LAMB1P07942 1786 aa15.03■□□□□ -0
VMP1-202ENST00000585847 CYP2D6P10635 497 aa15.03■□□□□ -0
VMP1-202ENST00000585847 HSPD1P10809 573 aaKnown RBP15.03■□□□□ -0
VMP1-202ENST00000585847 USP5P45974 858 aa15.03■□□□□ -0
VMP1-202ENST00000585847 TNNI2P48788 182 aa15.03■□□□□ -0
VMP1-202ENST00000585847 TSGA10IPQ3SY00 556 aa15.03■□□□□ -0
VMP1-202ENST00000585847 CST9Q5W186 159 aa15.03■□□□□ -0
VMP1-202ENST00000585847 IFNL3Q8IZI9 196 aa15.03■□□□□ -0
VMP1-202ENST00000585847 SAP30BPQ9UHR5 308 aaKnown RBP15.03■□□□□ -0
VMP1-202ENST00000585847 PALD1Q9ULE6 856 aa15.03■□□□□ -0
VMP1-202ENST00000585847 FZD1Q9UP38 647 aa15.03■□□□□ -0
VMP1-202ENST00000585847 TLL2Q9Y6L7 1015 aa15.03■□□□□ -0
VMP1-202ENST00000585847 CYP2D7A0A087X1C5 515 aa15.02■□□□□ -0
VMP1-202ENST00000585847 CCDC85CA6NKD9 419 aa15.02■□□□□ -0
VMP1-202ENST00000585847 CELF2O95319 508 aaKnown RBP15.02■□□□□ -0
VMP1-202ENST00000585847 PSMA5P28066 241 aa15.02■□□□□ -0
VMP1-202ENST00000585847 PLCD1P51178 756 aa15.02■□□□□ -0
VMP1-202ENST00000585847 MAP3K10Q02779 954 aa15.02■□□□□ -0
VMP1-202ENST00000585847 PTH1RQ03431 593 aa15.02■□□□□ -0
VMP1-202ENST00000585847 HSCBQ8IWL3 235 aa15.02■□□□□ -0
VMP1-202ENST00000585847 DNAJC18Q9H819 358 aa15.02■□□□□ -0
VMP1-202ENST00000585847 ATP8A2Q9NTI2 1148 aa15.02■□□□□ -0
VMP1-202ENST00000585847 OTOFQ9HC10 1997 aa15.02□□□□□ -0.01
VMP1-202ENST00000585847 HMGB1P09429 215 aaKnown RBP15.01□□□□□ -0.01
VMP1-202ENST00000585847 MAP2K2P36507 400 aa15.01□□□□□ -0.01
VMP1-202ENST00000585847 ALX1Q15699 326 aa15.01□□□□□ -0.01
VMP1-202ENST00000585847 SLC4A8Q2Y0W8 1093 aa15.01□□□□□ -0.01
VMP1-202ENST00000585847 GIMAP6Q6P9H5 292 aa15.01□□□□□ -0.01
VMP1-202ENST00000585847 CTR9Q6PD62 1173 aa15.01□□□□□ -0.01
VMP1-202ENST00000585847 METTL16Q86W50 562 aaKnown RBP15.01□□□□□ -0.01
VMP1-202ENST00000585847 ZNF408Q9H9D4 720 aa15.01□□□□□ -0.01
VMP1-202ENST00000585847 TACC3Q9Y6A5 838 aa15.01□□□□□ -0.01
VMP1-202ENST00000585847 USP17L12C9JPN9 530 aa15□□□□□ -0.01
VMP1-202ENST00000585847 USP17L21D6R901 530 aa15□□□□□ -0.01
VMP1-202ENST00000585847 CA12O43570 354 aa15□□□□□ -0.01
VMP1-202ENST00000585847 USP2O75604 605 aaPredicted RBP15□□□□□ -0.01
VMP1-202ENST00000585847 FGAP02671 866 aa15□□□□□ -0.01
VMP1-202ENST00000585847 GABPAQ06546 454 aa15□□□□□ -0.01
VMP1-202ENST00000585847 RRP1BQ14684 758 aaKnown RBP15□□□□□ -0.01
VMP1-202ENST00000585847 SBK1Q52WX2 424 aa15□□□□□ -0.01
VMP1-202ENST00000585847 C12orf60Q5U649 245 aa15□□□□□ -0.01
VMP1-202ENST00000585847 MOB2Q70IA6 237 aa15□□□□□ -0.01
VMP1-202ENST00000585847 NACAP1Q9BZK3 213 aa15□□□□□ -0.01
VMP1-202ENST00000585847 MCM9Q9NXL9 1143 aa15□□□□□ -0.01
VMP1-202ENST00000585847 TSKSQ9UJT2 592 aa15□□□□□ -0.01
VMP1-202ENST00000585847 LAMA4Q16363 1823 aa15□□□□□ -0.01
VMP1-202ENST00000585847 FAM196BA6NMK8 535 aa14.99□□□□□ -0.01
VMP1-202ENST00000585847 AOC2O75106 756 aa14.99□□□□□ -0.01
VMP1-202ENST00000585847 SAPCD2Q86UD0 394 aa14.99□□□□□ -0.01
VMP1-202ENST00000585847 CSRNP1Q96S65 589 aa14.99□□□□□ -0.01
VMP1-202ENST00000585847 DHX36Q9H2U1 1008 aaKnown RBP14.99□□□□□ -0.01
VMP1-202ENST00000585847 TBC1D12O60347 775 aa14.98□□□□□ -0.01
VMP1-202ENST00000585847 MLLT1Q03111 559 aaPredicted RBP14.98□□□□□ -0.01
VMP1-202ENST00000585847 NECTIN1Q15223 517 aa14.98□□□□□ -0.01
VMP1-202ENST00000585847 MAP3K11Q16584 847 aa14.98□□□□□ -0.01
VMP1-202ENST00000585847 MIGA2Q7L4E1 593 aa14.98□□□□□ -0.01
VMP1-202ENST00000585847 ZSCAN29Q8IWY8 852 aaPredicted RBP14.98□□□□□ -0.01
VMP1-202ENST00000585847 DYNLL2Q96FJ2 89 aa14.98□□□□□ -0.01
VMP1-202ENST00000585847 KIF2CQ99661 725 aa14.98□□□□□ -0.01
VMP1-202ENST00000585847 NBPF3Q9H094 633 aa14.98□□□□□ -0.01
VMP1-202ENST00000585847 PI4KBQ9UBF8 816 aa14.98□□□□□ -0.01
VMP1-202ENST00000585847 ZNF112Q9UJU3 913 aa14.98□□□□□ -0.01
VMP1-202ENST00000585847 RBM8AQ9Y5S9 174 aaKnown RBP14.98□□□□□ -0.01
VMP1-202ENST00000585847 ATAD5Q96QE3 1844 aa14.97□□□□□ -0.01
VMP1-202ENST00000585847 PHF20L1A8MW92 1017 aa14.97□□□□□ -0.01
VMP1-202ENST00000585847 APPP05067 770 aa14.97□□□□□ -0.01
VMP1-202ENST00000585847 POLR3DP05423 398 aaPredicted RBP14.97□□□□□ -0.01
VMP1-202ENST00000585847 PCP11498 1178 aaKnown RBP14.97□□□□□ -0.01
VMP1-202ENST00000585847 PRKG1Q13976 671 aa14.97□□□□□ -0.01
VMP1-202ENST00000585847 ANKRD1Q15327 319 aa14.97□□□□□ -0.01
VMP1-202ENST00000585847 IMMTQ16891 758 aaKnown RBP14.97□□□□□ -0.01
VMP1-202ENST00000585847 SUPT20HL1Q3ZLR7 823 aa14.97□□□□□ -0.01
VMP1-202ENST00000585847 SLC44A5Q8NCS7 719 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms