RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 PRO3102Q9H379 93 aa17.86■□□□□ 0.45
SDF2-202ENST00000585428 RBM27Q9P2N5 1060 aaKnown RBP17.86■□□□□ 0.45
SDF2-202ENST00000585428 PNMA6EA0A0J9YXQ4 647 aa17.85■□□□□ 0.45
SDF2-202ENST00000585428 IPO8O15397 1037 aaKnown RBP17.85■□□□□ 0.45
SDF2-202ENST00000585428 GNAI2P04899 355 aa17.85■□□□□ 0.45
SDF2-202ENST00000585428 TRIM27P14373 513 aa17.85■□□□□ 0.45
SDF2-202ENST00000585428 MCAMP43121 646 aa17.85■□□□□ 0.45
SDF2-202ENST00000585428 GORABQ5T7V8 394 aa17.85■□□□□ 0.45
SDF2-202ENST00000585428 AK9Q5TCS8 1911 aa17.85■□□□□ 0.45
SDF2-202ENST00000585428 ZNF280CQ8ND82 737 aa17.85■□□□□ 0.45
SDF2-202ENST00000585428 TBC1D2Q9BYX2 928 aa17.85■□□□□ 0.45
SDF2-202ENST00000585428 MYH2Q9UKX2 1941 aa17.84■□□□□ 0.45
SDF2-202ENST00000585428 MYH13Q9UKX3 1938 aa17.84■□□□□ 0.45
SDF2-202ENST00000585428 INHAP05111 366 aa17.84■□□□□ 0.45
SDF2-202ENST00000585428 G3BP1Q13283 466 aaKnown RBP eCLIP17.84■□□□□ 0.45
SDF2-202ENST00000585428 FAM110CQ1W6H9 321 aa17.84■□□□□ 0.45
SDF2-202ENST00000585428 SH3D19Q5HYK7 790 aa17.84■□□□□ 0.45
SDF2-202ENST00000585428 COA7Q96BR5 231 aa17.84■□□□□ 0.45
SDF2-202ENST00000585428 PAK6Q9NQU5 681 aaPredicted RBP17.84■□□□□ 0.45
SDF2-202ENST00000585428 RAI14Q9P0K7 980 aa17.84■□□□□ 0.45
SDF2-202ENST00000585428 PNMA3Q9UL41 463 aa17.84■□□□□ 0.45
SDF2-202ENST00000585428 TNNQ9UQP3 1299 aa17.84■□□□□ 0.45
SDF2-202ENST00000585428 USP17L5A8MUK1 530 aa17.83■□□□□ 0.44
SDF2-202ENST00000585428 BCAR3O75815 825 aa17.83■□□□□ 0.44
SDF2-202ENST00000585428 FARP2O94887 1054 aaPredicted RBP17.83■□□□□ 0.44
SDF2-202ENST00000585428 TFRCP02786 760 aaKnown RBP17.83■□□□□ 0.44
SDF2-202ENST00000585428 UQCRFS1P1P0C7P4 283 aa17.83■□□□□ 0.44
SDF2-202ENST00000585428 ATF7IPQ6VMQ6 1270 aa17.83■□□□□ 0.44
SDF2-202ENST00000585428 CRISPLD2Q9H0B8 497 aa17.83■□□□□ 0.44
SDF2-202ENST00000585428 LRP2BPQ9P2M1 347 aa17.83■□□□□ 0.44
SDF2-202ENST00000585428 PI4KBQ9UBF8 816 aa17.83■□□□□ 0.44
SDF2-202ENST00000585428 HERC5Q9UII4 1024 aaKnown RBP17.83■□□□□ 0.44
SDF2-202ENST00000585428 GJD2Q9UKL4 321 aa17.83■□□□□ 0.44
SDF2-202ENST00000585428 NR2E3Q9Y5X4 410 aa17.83■□□□□ 0.44
SDF2-202ENST00000585428 COL2A1P02458 1487 aaPredicted RBP17.82■□□□□ 0.44
SDF2-202ENST00000585428 CCER2I3L3R5 266 aa17.82■□□□□ 0.44
SDF2-202ENST00000585428 ZBTB7BO15156 539 aaPredicted RBP17.82■□□□□ 0.44
SDF2-202ENST00000585428 GCLCP48506 637 aaPredicted RBP17.82■□□□□ 0.44
SDF2-202ENST00000585428 PPP4CP60510 307 aa17.82■□□□□ 0.44
SDF2-202ENST00000585428 METTL16Q86W50 562 aaKnown RBP17.82■□□□□ 0.44
SDF2-202ENST00000585428 SH3RF3Q8TEJ3 882 aaPredicted RBP17.82■□□□□ 0.44
SDF2-202ENST00000585428 DEFB118Q96PH6 123 aa17.82■□□□□ 0.44
SDF2-202ENST00000585428 GPR108Q9NPR9 543 aa17.82■□□□□ 0.44
SDF2-202ENST00000585428 HMGCS2P54868 508 aa17.81■□□□□ 0.44
SDF2-202ENST00000585428 POLA2Q14181 598 aa17.81■□□□□ 0.44
SDF2-202ENST00000585428 TEX11Q8IYF3 940 aa17.81■□□□□ 0.44
SDF2-202ENST00000585428 WDR18Q9BV38 432 aa17.81■□□□□ 0.44
SDF2-202ENST00000585428 ASCC2Q9H1I8 757 aaPredicted RBP17.81■□□□□ 0.44
SDF2-202ENST00000585428 DHX36Q9H2U1 1008 aaKnown RBP17.81■□□□□ 0.44
SDF2-202ENST00000585428 JAG1P78504 1218 aa17.8■□□□□ 0.44
SDF2-202ENST00000585428 PABPC4Q13310 644 aaKnown RBP eCLIP17.8■□□□□ 0.44
SDF2-202ENST00000585428 FOXP4Q8IVH2 680 aaPredicted RBP17.8■□□□□ 0.44
SDF2-202ENST00000585428 RANBP2P49792 3224 aaKnown RBP17.8■□□□□ 0.44
SDF2-202ENST00000585428 SZT2Q5T011 3432 aa17.79■□□□□ 0.44
SDF2-202ENST00000585428 BAG3O95817 575 aa17.79■□□□□ 0.44
SDF2-202ENST00000585428 HOXA7P31268 230 aaPredicted RBP17.79■□□□□ 0.44
SDF2-202ENST00000585428 ATP8B2P98198 1209 aa17.79■□□□□ 0.44
SDF2-202ENST00000585428 FRAT1Q92837 279 aaPredicted RBP17.79■□□□□ 0.44
SDF2-202ENST00000585428 CLUAP1Q96AJ1 413 aa17.79■□□□□ 0.44
SDF2-202ENST00000585428 ZNF512BQ96KM6 892 aaPredicted RBP17.79■□□□□ 0.44
SDF2-202ENST00000585428 AS3MTQ9HBK9 375 aa17.79■□□□□ 0.44
SDF2-202ENST00000585428 SNRKQ9NRH2 765 aa17.79■□□□□ 0.44
SDF2-202ENST00000585428 MORF4L1Q9UBU8 362 aa17.79■□□□□ 0.44
SDF2-202ENST00000585428 PHIPQ8WWQ0 1821 aa17.79■□□□□ 0.44
SDF2-202ENST00000585428 DOCK2Q92608 1830 aa17.78■□□□□ 0.44
SDF2-202ENST00000585428 EVI5O60447 810 aa17.78■□□□□ 0.44
SDF2-202ENST00000585428 IGSF3O75054 1194 aa17.78■□□□□ 0.44
SDF2-202ENST00000585428 CYP2E1P05181 493 aaPredicted RBP17.78■□□□□ 0.44
SDF2-202ENST00000585428 PLCG2P16885 1265 aa17.78■□□□□ 0.44
SDF2-202ENST00000585428 BACE1P56817 501 aa17.78■□□□□ 0.44
SDF2-202ENST00000585428 TNNI3KQ59H18 835 aa17.78■□□□□ 0.44
SDF2-202ENST00000585428 NAA16Q6N069 864 aaPredicted RBP17.78■□□□□ 0.44
SDF2-202ENST00000585428 ADGRA1Q86SQ6 560 aa17.78■□□□□ 0.44
SDF2-202ENST00000585428 SSH3Q8TE77 659 aa17.78■□□□□ 0.44
SDF2-202ENST00000585428 TGFBRAP1Q8WUH2 860 aa17.78■□□□□ 0.44
SDF2-202ENST00000585428 PAWRQ96IZ0 340 aaKnown RBP17.78■□□□□ 0.44
SDF2-202ENST00000585428 AATFQ9NY61 560 aaKnown RBP eCLIP17.78■□□□□ 0.44
SDF2-202ENST00000585428 FPGT-TNNI3KV9GXZ4 949 aa17.78■□□□□ 0.44
SDF2-202ENST00000585428 ASNSP08243 561 aa17.77■□□□□ 0.44
SDF2-202ENST00000585428 CCDC158Q5M9N0 1113 aa17.77■□□□□ 0.44
SDF2-202ENST00000585428 TMEM57Q8N5G2 664 aa17.77■□□□□ 0.44
SDF2-202ENST00000585428 P2RX7Q99572 595 aaKnown RBP17.77■□□□□ 0.44
SDF2-202ENST00000585428 DBNDD2Q9BQY9 259 aa17.77■□□□□ 0.44
SDF2-202ENST00000585428 NOL10Q9BSC4 688 aaKnown RBP17.77■□□□□ 0.44
SDF2-202ENST00000585428 DNAJC18Q9H819 358 aa17.77■□□□□ 0.44
SDF2-202ENST00000585428 TAOK2Q9UL54 1235 aa17.77■□□□□ 0.44
SDF2-202ENST00000585428 RPTORQ8N122 1335 aa17.76■□□□□ 0.43
SDF2-202ENST00000585428 MGAMO43451 1857 aa17.76■□□□□ 0.43
SDF2-202ENST00000585428 C19orf81C9J6K1 198 aa17.76■□□□□ 0.43
SDF2-202ENST00000585428 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.76■□□□□ 0.43
SDF2-202ENST00000585428 GINM1Q9NU53 330 aa17.76■□□□□ 0.43
SDF2-202ENST00000585428 PALD1Q9ULE6 856 aa17.76■□□□□ 0.43
SDF2-202ENST00000585428 NOP58Q9Y2X3 529 aaKnown RBP17.76■□□□□ 0.43
SDF2-202ENST00000585428 DOCK1Q14185 1865 aa17.75■□□□□ 0.43
SDF2-202ENST00000585428 A0A1W2PPC1 479 aa17.75■□□□□ 0.43
SDF2-202ENST00000585428 HMGCRP04035 888 aa17.75■□□□□ 0.43
SDF2-202ENST00000585428 MNX1P50219 401 aaPredicted RBP17.75■□□□□ 0.43
SDF2-202ENST00000585428 TRIM32Q13049 653 aa17.75■□□□□ 0.43
SDF2-202ENST00000585428 MTMR2Q13614 643 aa17.75■□□□□ 0.43
SDF2-202ENST00000585428 TTC39AQ5SRH9 613 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms