RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 DHX32Q7L7V1 743 aaKnown RBP17.48■□□□□ 0.39
CDK5RAP3-236ENST00000584991 NIM1KQ8IY84 436 aa17.48■□□□□ 0.39
CDK5RAP3-236ENST00000584991 NCOA7Q8NI08 942 aa17.48■□□□□ 0.39
CDK5RAP3-236ENST00000584991 ZSCAN16Q9H4T2 348 aaPredicted RBP17.48■□□□□ 0.39
CDK5RAP3-236ENST00000584991 RAD17O75943 681 aa17.48■□□□□ 0.39
CDK5RAP3-236ENST00000584991 CAVIN2O95810 425 aa17.48■□□□□ 0.39
CDK5RAP3-236ENST00000584991 PPARAQ07869 468 aa17.48■□□□□ 0.39
CDK5RAP3-236ENST00000584991 CTR9Q6PD62 1173 aa17.48■□□□□ 0.39
CDK5RAP3-236ENST00000584991 CERS3Q8IU89 383 aa17.48■□□□□ 0.39
CDK5RAP3-236ENST00000584991 LRRC2Q9BYS8 371 aa17.48■□□□□ 0.39
CDK5RAP3-236ENST00000584991 INCENPQ9NQS7 918 aa17.48■□□□□ 0.39
CDK5RAP3-236ENST00000584991 TIAM2Q8IVF5 1701 aa17.47■□□□□ 0.39
CDK5RAP3-236ENST00000584991 CYP2D7A0A087X1C5 515 aa17.47■□□□□ 0.39
CDK5RAP3-236ENST00000584991 USP17L12C9JPN9 530 aa17.47■□□□□ 0.39
CDK5RAP3-236ENST00000584991 USP17L21D6R901 530 aa17.47■□□□□ 0.39
CDK5RAP3-236ENST00000584991 ADCY5O95622 1261 aa17.47■□□□□ 0.39
CDK5RAP3-236ENST00000584991 EXOSC10Q01780 885 aaKnown RBP17.47■□□□□ 0.39
CDK5RAP3-236ENST00000584991 TRDNQ13061 729 aa17.47■□□□□ 0.39
CDK5RAP3-236ENST00000584991 HHIPL2Q6UWX4 724 aa17.47■□□□□ 0.39
CDK5RAP3-236ENST00000584991 Q6ZUG5 572 aa17.47■□□□□ 0.39
CDK5RAP3-236ENST00000584991 CHST3Q7LGC8 479 aa17.47■□□□□ 0.39
CDK5RAP3-236ENST00000584991 RALYLQ86SE5 291 aaKnown RBP17.47■□□□□ 0.39
CDK5RAP3-236ENST00000584991 STK11IPQ8N1F8 1099 aa17.47■□□□□ 0.39
CDK5RAP3-236ENST00000584991 NECAB1Q8N987 351 aa17.47■□□□□ 0.39
CDK5RAP3-236ENST00000584991 TGFBRAP1Q8WUH2 860 aa17.47■□□□□ 0.39
CDK5RAP3-236ENST00000584991 UBE2Q2Q8WVN8 375 aa17.47■□□□□ 0.39
CDK5RAP3-236ENST00000584991 GTF3C6Q969F1 213 aa17.47■□□□□ 0.39
CDK5RAP3-236ENST00000584991 TEKT1Q969V4 418 aa17.47■□□□□ 0.39
CDK5RAP3-236ENST00000584991 PDCL3Q9H2J4 239 aa17.47■□□□□ 0.39
CDK5RAP3-236ENST00000584991 DDX19AQ9NUU7 478 aaKnown RBP17.47■□□□□ 0.39
CDK5RAP3-236ENST00000584991 ZNRF3Q9ULT6 936 aa17.47■□□□□ 0.39
CDK5RAP3-236ENST00000584991 TACC3Q9Y6A5 838 aa17.47■□□□□ 0.39
CDK5RAP3-236ENST00000584991 PLCG2P16885 1265 aa17.46■□□□□ 0.39
CDK5RAP3-236ENST00000584991 RHBDL3P58872 404 aa17.46■□□□□ 0.39
CDK5RAP3-236ENST00000584991 RASSF7Q02833 373 aa17.46■□□□□ 0.39
CDK5RAP3-236ENST00000584991 AKNAD1Q5T1N1 836 aa17.46■□□□□ 0.39
CDK5RAP3-236ENST00000584991 MTERF4Q7Z6M4 381 aaKnown RBP17.46■□□□□ 0.39
CDK5RAP3-236ENST00000584991 MB21D2Q8IYB1 491 aaPredicted RBP17.46■□□□□ 0.39
CDK5RAP3-236ENST00000584991 TEX11Q8IYF3 940 aa17.46■□□□□ 0.39
CDK5RAP3-236ENST00000584991 PIBF1Q8WXW3 757 aa17.46■□□□□ 0.39
CDK5RAP3-236ENST00000584991 KIF3AQ9Y496 699 aa17.46■□□□□ 0.39
CDK5RAP3-236ENST00000584991 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.46■□□□□ 0.39
CDK5RAP3-236ENST00000584991 NAV1Q8NEY1 1877 aa17.46■□□□□ 0.39
CDK5RAP3-236ENST00000584991 NEDD4P46934 1319 aa17.46■□□□□ 0.39
CDK5RAP3-236ENST00000584991 LAMB1P07942 1786 aa17.46■□□□□ 0.39
CDK5RAP3-236ENST00000584991 SMIM22K7EJ46 135 aa17.46■□□□□ 0.38
CDK5RAP3-236ENST00000584991 PSMD14O00487 310 aa17.46■□□□□ 0.38
CDK5RAP3-236ENST00000584991 CRKP46108 304 aa17.46■□□□□ 0.38
CDK5RAP3-236ENST00000584991 ATL3Q6DD88 541 aa17.46■□□□□ 0.38
CDK5RAP3-236ENST00000584991 SASS6Q6UVJ0 657 aa17.46■□□□□ 0.38
CDK5RAP3-236ENST00000584991 JDP2Q8WYK2 163 aa17.46■□□□□ 0.38
CDK5RAP3-236ENST00000584991 MCM9Q9NXL9 1143 aa17.46■□□□□ 0.38
CDK5RAP3-236ENST00000584991 MKRN1Q9UHC7 482 aaKnown RBP17.46■□□□□ 0.38
CDK5RAP3-236ENST00000584991 GOLGA6L6A8MZA4 724 aa17.45■□□□□ 0.38
CDK5RAP3-236ENST00000584991 DYNC1I1O14576 645 aa17.45■□□□□ 0.38
CDK5RAP3-236ENST00000584991 MAP3K11Q16584 847 aa17.45■□□□□ 0.38
CDK5RAP3-236ENST00000584991 RSBN1LQ6PCB5 846 aaPredicted RBP17.45■□□□□ 0.38
CDK5RAP3-236ENST00000584991 RBM43Q6ZSC3 357 aaKnown RBP17.45■□□□□ 0.38
CDK5RAP3-236ENST00000584991 MFSD6Q6ZSS7 791 aa17.45■□□□□ 0.38
CDK5RAP3-236ENST00000584991 TTC6Q86TZ1 520 aa17.45■□□□□ 0.38
CDK5RAP3-236ENST00000584991 MAPKAPK5Q8IW41 473 aa17.45■□□□□ 0.38
CDK5RAP3-236ENST00000584991 NKX2-3Q8TAU0 364 aa17.45■□□□□ 0.38
CDK5RAP3-236ENST00000584991 STAG1Q8WVM7 1258 aa17.45■□□□□ 0.38
CDK5RAP3-236ENST00000584991 ANAPC4Q9UJX5 808 aa17.45■□□□□ 0.38
CDK5RAP3-236ENST00000584991 CFAP45Q9UL16 551 aa17.45■□□□□ 0.38
CDK5RAP3-236ENST00000584991 LTBP3Q9NS15 1303 aa17.44■□□□□ 0.38
CDK5RAP3-236ENST00000584991 FOCADQ5VW36 1801 aa17.44■□□□□ 0.38
CDK5RAP3-236ENST00000584991 GOLGA6L4A6NEF3 574 aa17.44■□□□□ 0.38
CDK5RAP3-236ENST00000584991 B4E1Z4 1266 aa17.44■□□□□ 0.38
CDK5RAP3-236ENST00000584991 VIL1P09327 827 aaKnown RBP17.44■□□□□ 0.38
CDK5RAP3-236ENST00000584991 USP17L8P0C7I0 530 aa17.44■□□□□ 0.38
CDK5RAP3-236ENST00000584991 FGD1P98174 961 aa17.44■□□□□ 0.38
CDK5RAP3-236ENST00000584991 MRIQ9BWK5 157 aa17.44■□□□□ 0.38
CDK5RAP3-236ENST00000584991 NUP62CLQ9H1M0 184 aa17.44■□□□□ 0.38
CDK5RAP3-236ENST00000584991 ARPP21Q9UBL0 812 aaPredicted RBP17.44■□□□□ 0.38
CDK5RAP3-236ENST00000584991 R3HCC1Q9Y3T6 440 aaKnown RBP17.44■□□□□ 0.38
CDK5RAP3-236ENST00000584991 PRC1O43663 620 aa17.44■□□□□ 0.38
CDK5RAP3-236ENST00000584991 CYP2D6P10635 497 aa17.44■□□□□ 0.38
CDK5RAP3-236ENST00000584991 RBM5P52756 815 aaKnown RBP eCLIP17.44■□□□□ 0.389e-32■■■■□ 20.3
CDK5RAP3-236ENST00000584991 HDLBPQ00341 1268 aaKnown RBP17.44■□□□□ 0.38
CDK5RAP3-236ENST00000584991 EVX2Q03828 476 aa17.44■□□□□ 0.38
CDK5RAP3-236ENST00000584991 SLC4A8Q2Y0W8 1093 aa17.44■□□□□ 0.38
CDK5RAP3-236ENST00000584991 SBK1Q52WX2 424 aa17.44■□□□□ 0.38
CDK5RAP3-236ENST00000584991 CDC37L1Q7L3B6 337 aa17.44■□□□□ 0.38
CDK5RAP3-236ENST00000584991 FAM200AQ8TCP9 573 aa17.44■□□□□ 0.38
CDK5RAP3-236ENST00000584991 PRIMPOLQ96LW4 560 aa17.44■□□□□ 0.38
CDK5RAP3-236ENST00000584991 SYT17Q9BSW7 474 aa17.44■□□□□ 0.38
CDK5RAP3-236ENST00000584991 TOMM22Q9NS69 142 aa17.44■□□□□ 0.38
CDK5RAP3-236ENST00000584991 PCDHAC2Q9Y5I4 1007 aa17.44■□□□□ 0.38
CDK5RAP3-236ENST00000584991 MYO3BQ8WXR4 1341 aa17.43■□□□□ 0.38
CDK5RAP3-236ENST00000584991 ECM29Q5VYK3 1845 aa17.43■□□□□ 0.38
CDK5RAP3-236ENST00000584991 MYH1P12882 1939 aa17.43■□□□□ 0.38
CDK5RAP3-236ENST00000584991 ANTXR2P58335 489 aa17.43■□□□□ 0.38
CDK5RAP3-236ENST00000584991 HMGN5P82970 282 aaKnown RBP17.43■□□□□ 0.38
CDK5RAP3-236ENST00000584991 CXCL9Q07325 125 aa17.43■□□□□ 0.38
CDK5RAP3-236ENST00000584991 RRP12Q5JTH9 1297 aaKnown RBP17.43■□□□□ 0.38
CDK5RAP3-236ENST00000584991 APOBEC3HQ6NTF7 200 aaKnown RBP17.43■□□□□ 0.38
CDK5RAP3-236ENST00000584991 CYB5R4Q7L1T6 521 aa17.43■□□□□ 0.38
CDK5RAP3-236ENST00000584991 FBXL16Q8N461 479 aa17.43■□□□□ 0.38
CDK5RAP3-236ENST00000584991 BRF1Q92994 677 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms