RNA–Protein interactions for RNA: ENST00000584784.5

EIF4A1-233, Transcript of eukaryotic translation initiation factor 4A1, human

TSL 5

Gene EIF4A1, Length 818 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EIF4A1-233	ENST00000584784	SAMD7	Q7Z3H4	446 aa		11.41	□□□□□ -0.58
EIF4A1-233	ENST00000584784	CSRNP1	Q96S65	589 aa		11.41	□□□□□ -0.58
EIF4A1-233	ENST00000584784	TBC1D2	Q9BYX2	928 aa		11.41	□□□□□ -0.58
EIF4A1-233	ENST00000584784	TAF1D	Q9H5J8	278 aa	Predicted RBP	11.41	□□□□□ -0.58
EIF4A1-233	ENST00000584784	ZSWIM6	Q9HCJ5	1215 aa		11.41	□□□□□ -0.58
EIF4A1-233	ENST00000584784	FAM198A	Q9UFP1	575 aa		11.41	□□□□□ -0.58
EIF4A1-233	ENST00000584784	SCN4A	P35499	1836 aa		11.41	□□□□□ -0.58
EIF4A1-233	ENST00000584784	TIAM2	Q8IVF5	1701 aa		11.4	□□□□□ -0.58
EIF4A1-233	ENST00000584784	TCP10L2	B9ZVM9	353 aa		11.4	□□□□□ -0.58
EIF4A1-233	ENST00000584784	FOXP2	O15409	715 aa		11.4	□□□□□ -0.58
EIF4A1-233	ENST00000584784	FGD1	P98174	961 aa		11.4	□□□□□ -0.58
EIF4A1-233	ENST00000584784	MAP3K10	Q02779	954 aa		11.4	□□□□□ -0.58
EIF4A1-233	ENST00000584784	PPP2R5B	Q15173	497 aa		11.4	□□□□□ -0.58
EIF4A1-233	ENST00000584784	RUFY3	Q7L099	469 aa		11.4	□□□□□ -0.58
EIF4A1-233	ENST00000584784	LDHD	Q86WU2	507 aa		11.4	□□□□□ -0.58
EIF4A1-233	ENST00000584784	JAKMIP1	Q96N16	626 aa	Known RBP	11.4	□□□□□ -0.58
EIF4A1-233	ENST00000584784	TTC14	Q96N46	770 aa		11.4	□□□□□ -0.58
EIF4A1-233	ENST00000584784	DEFB129	Q9H1M3	183 aa		11.4	□□□□□ -0.58
EIF4A1-233	ENST00000584784	CABP5	Q9NP86	173 aa		11.4	□□□□□ -0.58
EIF4A1-233	ENST00000584784	TCP11L1	Q9NUJ3	509 aa		11.4	□□□□□ -0.58
EIF4A1-233	ENST00000584784	SYNPO2	Q9UMS6	1093 aa		11.4	□□□□□ -0.58
EIF4A1-233	ENST00000584784	WDR90	Q96KV7	1748 aa		11.4	□□□□□ -0.58
EIF4A1-233	ENST00000584784	CLRN2	A0PK11	232 aa		11.39	□□□□□ -0.59
EIF4A1-233	ENST00000584784	PPP1R12B	O60237	982 aa	Predicted RBP	11.39	□□□□□ -0.59
EIF4A1-233	ENST00000584784	CAST	P20810	708 aa	Known RBP	11.39	□□□□□ -0.59
EIF4A1-233	ENST00000584784	RCAN1	P53805	252 aa		11.39	□□□□□ -0.59
EIF4A1-233	ENST00000584784	GABPA	Q06546	454 aa		11.39	□□□□□ -0.59
EIF4A1-233	ENST00000584784	RASA3	Q14644	834 aa		11.39	□□□□□ -0.59
EIF4A1-233	ENST00000584784	ANGEL2	Q5VTE6	544 aa	Known RBP	11.39	□□□□□ -0.59
EIF4A1-233	ENST00000584784	ZSCAN31	Q96LW9	406 aa	Predicted RBP	11.39	□□□□□ -0.59
EIF4A1-233	ENST00000584784	UBAC1	Q9BSL1	405 aa		11.39	□□□□□ -0.59
EIF4A1-233	ENST00000584784	DDX4	Q9NQI0	724 aa	Known RBP	11.39	□□□□□ -0.59
EIF4A1-233	ENST00000584784	TOMM22	Q9NS69	142 aa		11.39	□□□□□ -0.59
EIF4A1-233	ENST00000584784	GGA3	Q9NZ52	723 aa		11.39	□□□□□ -0.59
EIF4A1-233	ENST00000584784	DAXX	Q9UER7	740 aa	Predicted RBP	11.39	□□□□□ -0.59
EIF4A1-233	ENST00000584784	PALD1	Q9ULE6	856 aa		11.39	□□□□□ -0.59
EIF4A1-233	ENST00000584784	ZNF646	O15015	1829 aa	Predicted RBP	11.39	□□□□□ -0.59
EIF4A1-233	ENST00000584784	MYO5A	Q9Y4I1	1855 aa	Known RBP	11.38	□□□□□ -0.59
EIF4A1-233	ENST00000584784	TSPY2	A6NKD2	308 aa		11.38	□□□□□ -0.59
EIF4A1-233	ENST00000584784	TSPY3	P0CV98	308 aa		11.38	□□□□□ -0.59
EIF4A1-233	ENST00000584784	TSPY8	P0CW00	308 aa		11.38	□□□□□ -0.59
EIF4A1-233	ENST00000584784	RPS6KB1	P23443	525 aa		11.38	□□□□□ -0.59
EIF4A1-233	ENST00000584784	LIFR	P42702	1097 aa		11.38	□□□□□ -0.59
EIF4A1-233	ENST00000584784	CDK8	P49336	464 aa		11.38	□□□□□ -0.59
EIF4A1-233	ENST00000584784	NEK4	P51957	841 aa		11.38	□□□□□ -0.59
EIF4A1-233	ENST00000584784	HAND2	P61296	217 aa		11.38	□□□□□ -0.59
EIF4A1-233	ENST00000584784	TCP10	Q12799	353 aa		11.38	□□□□□ -0.59
EIF4A1-233	ENST00000584784	NFIA	Q12857	509 aa		11.38	□□□□□ -0.59
EIF4A1-233	ENST00000584784	SYNE3	Q6ZMZ3	975 aa		11.38	□□□□□ -0.59
EIF4A1-233	ENST00000584784	KRT26	Q7Z3Y9	468 aa		11.38	□□□□□ -0.59
EIF4A1-233	ENST00000584784	DGKH	Q86XP1	1220 aa		11.38	□□□□□ -0.59
EIF4A1-233	ENST00000584784	TRPM4	Q8TD43	1214 aa		11.38	□□□□□ -0.59
EIF4A1-233	ENST00000584784	SNX21	Q969T3	373 aa		11.38	□□□□□ -0.59
EIF4A1-233	ENST00000584784	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	11.38	□□□□□ -0.59	6e-7	■■■■□ 26.5
EIF4A1-233	ENST00000584784	PDRG1	Q9NUG6	133 aa		11.38	□□□□□ -0.59
EIF4A1-233	ENST00000584784	SAP30BP	Q9UHR5	308 aa	Known RBP	11.38	□□□□□ -0.59
EIF4A1-233	ENST00000584784	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	11.38	□□□□□ -0.59	5e-7	■■■□□ 15.3
EIF4A1-233	ENST00000584784	RANBP6	O60518	1105 aa	Known RBP	11.37	□□□□□ -0.59
EIF4A1-233	ENST00000584784	PDIA4	P13667	645 aa	Known RBP	11.37	□□□□□ -0.59
EIF4A1-233	ENST00000584784	PLCD1	P51178	756 aa		11.37	□□□□□ -0.59
EIF4A1-233	ENST00000584784	FKBP1B	P68106	108 aa		11.37	□□□□□ -0.59
EIF4A1-233	ENST00000584784	CERKL	Q49MI3	558 aa	Predicted RBP	11.37	□□□□□ -0.59
EIF4A1-233	ENST00000584784	TATDN1	Q6P1N9	297 aa		11.37	□□□□□ -0.59
EIF4A1-233	ENST00000584784	HSCB	Q8IWL3	235 aa		11.37	□□□□□ -0.59
EIF4A1-233	ENST00000584784	RASEF	Q8IZ41	740 aa		11.37	□□□□□ -0.59
EIF4A1-233	ENST00000584784	ZNF341	Q9BYN7	854 aa		11.37	□□□□□ -0.59
EIF4A1-233	ENST00000584784	SH2D4A	Q9H788	454 aa		11.37	□□□□□ -0.59
EIF4A1-233	ENST00000584784	SH2B1	Q9NRF2	756 aa	Predicted RBP	11.37	□□□□□ -0.59
EIF4A1-233	ENST00000584784	CLEC11A	Q9Y240	323 aa		11.37	□□□□□ -0.59
EIF4A1-233	ENST00000584784	CCDC196	A0A1B0GTZ2	297 aa		11.36	□□□□□ -0.59
EIF4A1-233	ENST00000584784	DHX16	O60231	1041 aa	Known RBP	11.36	□□□□□ -0.59
EIF4A1-233	ENST00000584784	CTNND1	O60716	968 aa	Known RBP	11.36	□□□□□ -0.59
EIF4A1-233	ENST00000584784	ASNS	P08243	561 aa		11.36	□□□□□ -0.59
EIF4A1-233	ENST00000584784	CALM1	P0DP23	149 aa		11.36	□□□□□ -0.59
EIF4A1-233	ENST00000584784	CALM2	P0DP24	149 aa		11.36	□□□□□ -0.59
EIF4A1-233	ENST00000584784	CALM3	P0DP25	149 aa		11.36	□□□□□ -0.59
EIF4A1-233	ENST00000584784	IREB2	P48200	963 aa	Known RBP	11.36	□□□□□ -0.59
EIF4A1-233	ENST00000584784	HIRA	P54198	1017 aa	Predicted RBP	11.36	□□□□□ -0.59
EIF4A1-233	ENST00000584784	EXOSC10	Q01780	885 aa	Known RBP	11.36	□□□□□ -0.59
EIF4A1-233	ENST00000584784	CTDSPL2	Q05D32	466 aa		11.36	□□□□□ -0.59
EIF4A1-233	ENST00000584784	EAPP	Q56P03	285 aa	Predicted RBP	11.36	□□□□□ -0.59
EIF4A1-233	ENST00000584784	TMEM179	Q6ZVK1	233 aa		11.36	□□□□□ -0.59
EIF4A1-233	ENST00000584784	USP48	Q86UV5	1035 aa		11.36	□□□□□ -0.59
EIF4A1-233	ENST00000584784	MB21D2	Q8IYB1	491 aa	Predicted RBP	11.36	□□□□□ -0.59
EIF4A1-233	ENST00000584784	NEDD1	Q8NHV4	660 aa		11.36	□□□□□ -0.59
EIF4A1-233	ENST00000584784	KANSL2	Q9H9L4	492 aa		11.36	□□□□□ -0.59
EIF4A1-233	ENST00000584784	GPBP1L1	Q9HC44	474 aa	Predicted RBP	11.36	□□□□□ -0.59
EIF4A1-233	ENST00000584784	ANGEL1	Q9UNK9	670 aa	Known RBP	11.36	□□□□□ -0.59
EIF4A1-233	ENST00000584784	PLIN4	Q96Q06	1357 aa		11.36	□□□□□ -0.59
EIF4A1-233	ENST00000584784	DDTL	A6NHG4	134 aa	Predicted RBP	11.35	□□□□□ -0.59
EIF4A1-233	ENST00000584784	IFIT3	O14879	490 aa	Known RBP	11.35	□□□□□ -0.59
EIF4A1-233	ENST00000584784	PRC1	O43663	620 aa		11.35	□□□□□ -0.59
EIF4A1-233	ENST00000584784	KDM4A	O75164	1064 aa		11.35	□□□□□ -0.59
EIF4A1-233	ENST00000584784	CACNB3	P54284	484 aa		11.35	□□□□□ -0.59
EIF4A1-233	ENST00000584784	RRP12	Q5JTH9	1297 aa	Known RBP	11.35	□□□□□ -0.59
EIF4A1-233	ENST00000584784	ARMC9	Q7Z3E5	817 aa		11.35	□□□□□ -0.59
EIF4A1-233	ENST00000584784	SGMS1	Q86VZ5	419 aa		11.35	□□□□□ -0.59
EIF4A1-233	ENST00000584784	TBC1D10C	Q8IV04	446 aa		11.35	□□□□□ -0.59
EIF4A1-233	ENST00000584784	ANKS1A	Q92625	1134 aa		11.35	□□□□□ -0.59
EIF4A1-233	ENST00000584784	ZNF274	Q96GC6	653 aa	Predicted RBP	11.35	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms