RNA–Protein interactions for RNA: ENST00000583877.5

NUP85-223, Transcript of nucleoporin 85, human

TSL 3

Gene NUP85, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP85-223	ENST00000583877	DLL1	O00548	723 aa		10.89	□□□□□ -0.67
NUP85-223	ENST00000583877	TNPO2	O14787	897 aa	Known RBP	10.89	□□□□□ -0.67
NUP85-223	ENST00000583877	RGS3	P49796	1198 aa		10.89	□□□□□ -0.67
NUP85-223	ENST00000583877	ATP2B3	Q16720	1220 aa		10.89	□□□□□ -0.67
NUP85-223	ENST00000583877	SMCR8	Q8TEV9	937 aa	Predicted RBP	10.89	□□□□□ -0.67
NUP85-223	ENST00000583877	DEFB118	Q96PH6	123 aa		10.89	□□□□□ -0.67
NUP85-223	ENST00000583877	CRISPLD2	Q9H0B8	497 aa		10.89	□□□□□ -0.67
NUP85-223	ENST00000583877	DENND2A	Q9ULE3	1009 aa		10.89	□□□□□ -0.67
NUP85-223	ENST00000583877	LRRFIP2	Q9Y608	721 aa	Known RBP	10.89	□□□□□ -0.67
NUP85-223	ENST00000583877	SIPA1L1	O43166	1804 aa		10.88	□□□□□ -0.67
NUP85-223	ENST00000583877	GAK	O14976	1311 aa		10.88	□□□□□ -0.67
NUP85-223	ENST00000583877	SOX1	O00570	391 aa	Predicted RBP	10.88	□□□□□ -0.67
NUP85-223	ENST00000583877	CTNND1	O60716	968 aa	Known RBP	10.88	□□□□□ -0.67
NUP85-223	ENST00000583877	CIAO1	O76071	339 aa		10.88	□□□□□ -0.67
NUP85-223	ENST00000583877	FXR2	P51116	673 aa	Known RBP eCLIP	10.88	□□□□□ -0.67
NUP85-223	ENST00000583877	SH3BP5L	Q7L8J4	393 aa		10.88	□□□□□ -0.67
NUP85-223	ENST00000583877	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	10.88	□□□□□ -0.67
NUP85-223	ENST00000583877	ZGPAT	Q8N5A5	531 aa	Known RBP	10.88	□□□□□ -0.67
NUP85-223	ENST00000583877	COA7	Q96BR5	231 aa		10.88	□□□□□ -0.67
NUP85-223	ENST00000583877	CEP126	Q9P2H0	1117 aa		10.88	□□□□□ -0.67
NUP85-223	ENST00000583877	AGTPBP1	Q9UPW5	1226 aa		10.88	□□□□□ -0.67
NUP85-223	ENST00000583877	VCAN	P13611	3396 aa		10.88	□□□□□ -0.67
NUP85-223	ENST00000583877	PRUNE2	Q8WUY3	3088 aa		10.87	□□□□□ -0.67
NUP85-223	ENST00000583877	FAM110C	Q1W6H9	321 aa		10.87	□□□□□ -0.67
NUP85-223	ENST00000583877	GPR153	Q6NV75	609 aa		10.87	□□□□□ -0.67
NUP85-223	ENST00000583877	NECAB2	Q7Z6G3	386 aa		10.87	□□□□□ -0.67
NUP85-223	ENST00000583877	SLF2	Q8IX21	1173 aa		10.87	□□□□□ -0.67
NUP85-223	ENST00000583877	ANKLE1	Q8NAG6	615 aa		10.87	□□□□□ -0.67
NUP85-223	ENST00000583877	FAM163A	Q96GL9	167 aa	Predicted RBP	10.87	□□□□□ -0.67
NUP85-223	ENST00000583877	LRCH3	Q96II8	777 aa		10.87	□□□□□ -0.67
NUP85-223	ENST00000583877	PAWR	Q96IZ0	340 aa	Known RBP	10.87	□□□□□ -0.67
NUP85-223	ENST00000583877	STAP2	Q9UGK3	403 aa		10.87	□□□□□ -0.67
NUP85-223	ENST00000583877	PNMA3	Q9UL41	463 aa		10.87	□□□□□ -0.67
NUP85-223	ENST00000583877	MYH1	P12882	1939 aa		10.87	□□□□□ -0.67
NUP85-223	ENST00000583877	ZNF521	Q96K83	1311 aa		10.86	□□□□□ -0.67
NUP85-223	ENST00000583877	DDTL	A6NHG4	134 aa	Predicted RBP	10.86	□□□□□ -0.67
NUP85-223	ENST00000583877	TRIM75P	A6NK02	468 aa		10.86	□□□□□ -0.67
NUP85-223	ENST00000583877	BMP8B	P34820	402 aa		10.86	□□□□□ -0.67
NUP85-223	ENST00000583877	PHKA1	P46020	1223 aa		10.86	□□□□□ -0.67
NUP85-223	ENST00000583877	DZIP1	Q86YF9	867 aa	Known RBP	10.86	□□□□□ -0.67
NUP85-223	ENST00000583877	ANKRD13C	Q8N6S4	541 aa		10.86	□□□□□ -0.67
NUP85-223	ENST00000583877	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	10.86	□□□□□ -0.67
NUP85-223	ENST00000583877	SIL1	Q9H173	461 aa		10.86	□□□□□ -0.67
NUP85-223	ENST00000583877	PDS5A	Q29RF7	1337 aa	Known RBP	10.85	□□□□□ -0.67
NUP85-223	ENST00000583877	MAST2	Q6P0Q8	1798 aa		10.85	□□□□□ -0.67
NUP85-223	ENST00000583877	ANP32C	O43423	234 aa		10.85	□□□□□ -0.67
NUP85-223	ENST00000583877	TBC1D12	O60347	775 aa		10.85	□□□□□ -0.67
NUP85-223	ENST00000583877	HMGCR	P04035	888 aa		10.85	□□□□□ -0.67
NUP85-223	ENST00000583877	IL15	P40933	162 aa	Predicted RBP	10.85	□□□□□ -0.67
NUP85-223	ENST00000583877	GCLC	P48506	637 aa	Predicted RBP	10.85	□□□□□ -0.67
NUP85-223	ENST00000583877	TPRN	Q4KMQ1	711 aa		10.85	□□□□□ -0.67
NUP85-223	ENST00000583877	TREML2	Q5T2D2	321 aa		10.85	□□□□□ -0.67
NUP85-223	ENST00000583877	PROCA1	Q8NCQ7	364 aa	Predicted RBP	10.85	□□□□□ -0.67
NUP85-223	ENST00000583877	DIS3L	Q8TF46	1054 aa	Known RBP	10.85	□□□□□ -0.67
NUP85-223	ENST00000583877	SSH1	Q8WYL5	1049 aa		10.85	□□□□□ -0.67
NUP85-223	ENST00000583877	GDF15	Q99988	308 aa		10.85	□□□□□ -0.67
NUP85-223	ENST00000583877	TBC1D2	Q9BYX2	928 aa		10.85	□□□□□ -0.67
NUP85-223	ENST00000583877	DDX4	Q9NQI0	724 aa	Known RBP	10.85	□□□□□ -0.67
NUP85-223	ENST00000583877	COL2A1	P02458	1487 aa	Predicted RBP	10.85	□□□□□ -0.67
NUP85-223	ENST00000583877	SLURP2	P0DP57	97 aa		10.84	□□□□□ -0.67
NUP85-223	ENST00000583877	BTD	P43251	543 aa		10.84	□□□□□ -0.67
NUP85-223	ENST00000583877	PABPC4	Q13310	644 aa	Known RBP eCLIP	10.84	□□□□□ -0.67
NUP85-223	ENST00000583877	PDAP1	Q13442	181 aa	Known RBP	10.84	□□□□□ -0.67
NUP85-223	ENST00000583877	PICALM	Q13492	652 aa		10.84	□□□□□ -0.67
NUP85-223	ENST00000583877	SPTY2D1	Q68D10	685 aa	Predicted RBP	10.84	□□□□□ -0.67
NUP85-223	ENST00000583877	CCDC102B	Q68D86	513 aa		10.84	□□□□□ -0.67
NUP85-223	ENST00000583877	FAM9B	Q8IZU0	186 aa		10.84	□□□□□ -0.67
NUP85-223	ENST00000583877	OSBPL5	Q9H0X9	879 aa	Predicted RBP	10.84	□□□□□ -0.67
NUP85-223	ENST00000583877	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	10.84	□□□□□ -0.67
NUP85-223	ENST00000583877	ABCF2	Q9UG63	623 aa		10.84	□□□□□ -0.67
NUP85-223	ENST00000583877	PCDHB8	Q9UN66	801 aa		10.84	□□□□□ -0.67
NUP85-223	ENST00000583877	PCDHB13	Q9Y5F0	798 aa		10.84	□□□□□ -0.67
NUP85-223	ENST00000583877	MROH7-TTC4	A0A0A0MT08	1334 aa		10.84	□□□□□ -0.67
NUP85-223	ENST00000583877	RPTOR	Q8N122	1335 aa		10.84	□□□□□ -0.67
NUP85-223	ENST00000583877	GPR75-ASB3	A0A0A6YYF3	556 aa		10.83	□□□□□ -0.68
NUP85-223	ENST00000583877	MAP4K4	O95819	1239 aa	Predicted RBP	10.83	□□□□□ -0.68
NUP85-223	ENST00000583877	UBTFL1	P0CB47	393 aa	Predicted RBP	10.83	□□□□□ -0.68
NUP85-223	ENST00000583877	ADORA1	P30542	326 aa		10.83	□□□□□ -0.68
NUP85-223	ENST00000583877	RASGRF1	Q13972	1273 aa		10.83	□□□□□ -0.68
NUP85-223	ENST00000583877	NBR1	Q14596	966 aa		10.83	□□□□□ -0.68
NUP85-223	ENST00000583877	CCDC84	Q86UT8	332 aa	Predicted RBP	10.83	□□□□□ -0.68
NUP85-223	ENST00000583877	C7orf61	Q8IZ16	206 aa		10.83	□□□□□ -0.68
NUP85-223	ENST00000583877	ZNF280C	Q8ND82	737 aa		10.83	□□□□□ -0.68
NUP85-223	ENST00000583877	NBPF3	Q9H094	633 aa		10.83	□□□□□ -0.68
NUP85-223	ENST00000583877	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	10.83	□□□□□ -0.68
NUP85-223	ENST00000583877	HMX1	Q9NP08	348 aa	Predicted RBP	10.83	□□□□□ -0.68
NUP85-223	ENST00000583877	GJD2	Q9UKL4	321 aa		10.83	□□□□□ -0.68
NUP85-223	ENST00000583877	ZNFX1	Q9P2E3	1918 aa	Known RBP	10.83	□□□□□ -0.68
NUP85-223	ENST00000583877	CDH23	Q9H251	3354 aa		10.83	□□□□□ -0.68
NUP85-223	ENST00000583877		E9PSI1	815 aa		10.82	□□□□□ -0.68
NUP85-223	ENST00000583877	RHBDL3	P58872	404 aa		10.82	□□□□□ -0.68
NUP85-223	ENST00000583877	MECOM	Q03112	1051 aa		10.82	□□□□□ -0.68
NUP85-223	ENST00000583877	SPP2	Q13103	211 aa		10.82	□□□□□ -0.68
NUP85-223	ENST00000583877	LRIT3	Q3SXY7	679 aa		10.82	□□□□□ -0.68
NUP85-223	ENST00000583877	ALDH1L2	Q3SY69	923 aa		10.82	□□□□□ -0.68
NUP85-223	ENST00000583877	COPRS	Q9NQ92	184 aa		10.82	□□□□□ -0.68
NUP85-223	ENST00000583877	HDAC5	Q9UQL6	1122 aa		10.82	□□□□□ -0.68
NUP85-223	ENST00000583877	RLF	Q13129	1914 aa		10.82	□□□□□ -0.68
NUP85-223	ENST00000583877	SPTBN5	Q9NRC6	3674 aa	Known RBP	10.81	□□□□□ -0.68
NUP85-223	ENST00000583877	USP17L5	A8MUK1	530 aa		10.81	□□□□□ -0.68

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