RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 FGRP09769 529 aa11.08□□□□□ -0.64
UBBP4-201ENST00000583708 APLP1P51693 650 aa11.08□□□□□ -0.64
UBBP4-201ENST00000583708 MAP3K9P80192 1104 aa11.08□□□□□ -0.64
UBBP4-201ENST00000583708 GABPAQ06546 454 aa11.08□□□□□ -0.64
UBBP4-201ENST00000583708 LDLRAD1Q5T700 205 aa11.08□□□□□ -0.64
UBBP4-201ENST00000583708 TATDN1Q6P1N9 297 aa11.08□□□□□ -0.64
UBBP4-201ENST00000583708 SH3BP5LQ7L8J4 393 aa11.08□□□□□ -0.64
UBBP4-201ENST00000583708 SKAP1Q86WV1 359 aa11.08□□□□□ -0.64
UBBP4-201ENST00000583708 ZFPM1Q8IX07 1006 aa11.08□□□□□ -0.64
UBBP4-201ENST00000583708 ANKRD13AQ8IZ07 590 aa11.08□□□□□ -0.64
UBBP4-201ENST00000583708 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.08□□□□□ -0.64
UBBP4-201ENST00000583708 PALD1Q9ULE6 856 aa11.08□□□□□ -0.64
UBBP4-201ENST00000583708 AK9Q5TCS8 1911 aa11.07□□□□□ -0.64
UBBP4-201ENST00000583708 ROBO3Q96MS0 1386 aa11.07□□□□□ -0.64
UBBP4-201ENST00000583708 USP2O75604 605 aaPredicted RBP11.07□□□□□ -0.64
UBBP4-201ENST00000583708 PPARAQ07869 468 aa11.07□□□□□ -0.64
UBBP4-201ENST00000583708 TSGA10IPQ3SY00 556 aa11.07□□□□□ -0.64
UBBP4-201ENST00000583708 CCDC178Q5BJE1 867 aa11.07□□□□□ -0.64
UBBP4-201ENST00000583708 NOL9Q5SY16 702 aaKnown RBP11.07□□□□□ -0.64
UBBP4-201ENST00000583708 CCDC129Q6ZRS4 1044 aa11.07□□□□□ -0.64
UBBP4-201ENST00000583708 C16orf86Q6ZW13 317 aa11.07□□□□□ -0.64
UBBP4-201ENST00000583708 KLRG1Q96E93 195 aa11.07□□□□□ -0.64
UBBP4-201ENST00000583708 LSG1Q9H089 658 aaKnown RBP11.07□□□□□ -0.64
UBBP4-201ENST00000583708 CNNM2Q9H8M5 875 aa11.07□□□□□ -0.64
UBBP4-201ENST00000583708 EPB41L4AQ9HCS5 686 aaPredicted RBP11.07□□□□□ -0.64
UBBP4-201ENST00000583708 ANO2Q9NQ90 1003 aa11.07□□□□□ -0.64
UBBP4-201ENST00000583708 CREBZFQ9NS37 354 aa11.07□□□□□ -0.64
UBBP4-201ENST00000583708 CSADQ9Y600 493 aa11.07□□□□□ -0.64
UBBP4-201ENST00000583708 MINDY4BA8MYZ0 360 aa11.06□□□□□ -0.64
UBBP4-201ENST00000583708 FOXP2O15409 715 aa11.06□□□□□ -0.64
UBBP4-201ENST00000583708 ORC4O43929 436 aa11.06□□□□□ -0.64
UBBP4-201ENST00000583708 ASNSP08243 561 aa11.06□□□□□ -0.64
UBBP4-201ENST00000583708 ZKSCAN1P17029 563 aaPredicted RBP11.06□□□□□ -0.64
UBBP4-201ENST00000583708 MCCP23508 829 aa11.06□□□□□ -0.64
UBBP4-201ENST00000583708 PLCD1P51178 756 aa11.06□□□□□ -0.64
UBBP4-201ENST00000583708 KRT32Q14532 448 aa11.06□□□□□ -0.64
UBBP4-201ENST00000583708 VPS53Q5VIR6 699 aa11.06□□□□□ -0.64
UBBP4-201ENST00000583708 CST9Q5W186 159 aa11.06□□□□□ -0.64
UBBP4-201ENST00000583708 REM2Q8IYK8 340 aaPredicted RBP11.06□□□□□ -0.64
UBBP4-201ENST00000583708 ZNF444Q8N0Y2 327 aaPredicted RBP11.06□□□□□ -0.64
UBBP4-201ENST00000583708 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.06□□□□□ -0.64
UBBP4-201ENST00000583708 CCDC102AQ96A19 550 aa11.06□□□□□ -0.64
UBBP4-201ENST00000583708 MKNK2Q9HBH9 465 aa11.06□□□□□ -0.64
UBBP4-201ENST00000583708 CABP5Q9NP86 173 aa11.06□□□□□ -0.64
UBBP4-201ENST00000583708 SAP30BPQ9UHR5 308 aaKnown RBP11.06□□□□□ -0.64
UBBP4-201ENST00000583708 POLR2AP24928 1970 aaKnown RBP11.05□□□□□ -0.64
UBBP4-201ENST00000583708 PHF20L1A8MW92 1017 aa11.05□□□□□ -0.64
UBBP4-201ENST00000583708 TRAF5O00463 557 aa11.05□□□□□ -0.64
UBBP4-201ENST00000583708 CAP2P40123 477 aa11.05□□□□□ -0.64
UBBP4-201ENST00000583708 CDK8P49336 464 aa11.05□□□□□ -0.64
UBBP4-201ENST00000583708 C1QTNF8P60827 252 aa11.05□□□□□ -0.64
UBBP4-201ENST00000583708 TRDNQ13061 729 aa11.05□□□□□ -0.64
UBBP4-201ENST00000583708 TTLL12Q14166 644 aaPredicted RBP11.05□□□□□ -0.64
UBBP4-201ENST00000583708 NECTIN1Q15223 517 aa11.05□□□□□ -0.64
UBBP4-201ENST00000583708 CERKLQ49MI3 558 aaPredicted RBP11.05□□□□□ -0.64
UBBP4-201ENST00000583708 AKNAD1Q5T1N1 836 aa11.05□□□□□ -0.64
UBBP4-201ENST00000583708 MFSD6Q6ZSS7 791 aa11.05□□□□□ -0.64
UBBP4-201ENST00000583708 STAG1Q8WVM7 1258 aa11.05□□□□□ -0.64
UBBP4-201ENST00000583708 SLC10A4Q96EP9 437 aa11.05□□□□□ -0.64
UBBP4-201ENST00000583708 MTA3Q9BTC8 594 aa11.05□□□□□ -0.64
UBBP4-201ENST00000583708 KRT23Q9C075 422 aa11.05□□□□□ -0.64
UBBP4-201ENST00000583708 PICK1Q9NRD5 415 aa11.05□□□□□ -0.64
UBBP4-201ENST00000583708 SYNPO2Q9UMS6 1093 aa11.05□□□□□ -0.64
UBBP4-201ENST00000583708 ANGEL1Q9UNK9 670 aaKnown RBP11.05□□□□□ -0.64
UBBP4-201ENST00000583708 TLL2Q9Y6L7 1015 aa11.05□□□□□ -0.64
UBBP4-201ENST00000583708 HMGB1P09429 215 aaKnown RBP11.04□□□□□ -0.64
UBBP4-201ENST00000583708 INHBEP58166 350 aa11.04□□□□□ -0.64
UBBP4-201ENST00000583708 ANAPC15P60006 121 aa11.04□□□□□ -0.64
UBBP4-201ENST00000583708 PTH1RQ03431 593 aa11.04□□□□□ -0.64
UBBP4-201ENST00000583708 PPATQ06203 517 aa11.04□□□□□ -0.64
UBBP4-201ENST00000583708 TMEM179Q6ZVK1 233 aa11.04□□□□□ -0.64
UBBP4-201ENST00000583708 SAPCD2Q86UD0 394 aa11.04□□□□□ -0.64
UBBP4-201ENST00000583708 ERO1BQ86YB8 467 aa11.04□□□□□ -0.64
UBBP4-201ENST00000583708 SCYL3Q8IZE3 742 aa11.04□□□□□ -0.64
UBBP4-201ENST00000583708 KCNB2Q92953 911 aa11.04□□□□□ -0.64
UBBP4-201ENST00000583708 WRNIP1Q96S55 665 aa11.04□□□□□ -0.64
UBBP4-201ENST00000583708 UPF2Q9HAU5 1272 aaKnown RBP11.04□□□□□ -0.64
UBBP4-201ENST00000583708 TCP11L1Q9NUJ3 509 aa11.04□□□□□ -0.64
UBBP4-201ENST00000583708 RBM8AQ9Y5S9 174 aaKnown RBP11.04□□□□□ -0.64
UBBP4-201ENST00000583708 FOCADQ5VW36 1801 aa11.04□□□□□ -0.64
UBBP4-201ENST00000583708 RASSF10A6NK89 507 aa11.03□□□□□ -0.64
UBBP4-201ENST00000583708 ZBTB48P10074 688 aaPredicted RBP11.03□□□□□ -0.64
UBBP4-201ENST00000583708 SHMT1P34896 483 aa11.03□□□□□ -0.64
UBBP4-201ENST00000583708 ECE1P42892 770 aa11.03□□□□□ -0.64
UBBP4-201ENST00000583708 HUNKP57058 714 aa11.03□□□□□ -0.64
UBBP4-201ENST00000583708 ABCB5Q2M3G0 1257 aa11.03□□□□□ -0.64
UBBP4-201ENST00000583708 PRAMEF18Q5VWM3 479 aa11.03□□□□□ -0.64
UBBP4-201ENST00000583708 MIGA2Q7L4E1 593 aa11.03□□□□□ -0.64
UBBP4-201ENST00000583708 ESR2Q92731 530 aa11.03□□□□□ -0.64
UBBP4-201ENST00000583708 TTC14Q96N46 770 aa11.03□□□□□ -0.64
UBBP4-201ENST00000583708 WDR18Q9BV38 432 aa11.03□□□□□ -0.64
UBBP4-201ENST00000583708 USP26Q9BXU7 913 aa11.03□□□□□ -0.64
UBBP4-201ENST00000583708 KANSL2Q9H9L4 492 aa11.03□□□□□ -0.64
UBBP4-201ENST00000583708 AS3MTQ9HBK9 375 aa11.03□□□□□ -0.64
UBBP4-201ENST00000583708 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.03□□□□□ -0.64
UBBP4-201ENST00000583708 PAPPA2Q9BXP8 1791 aa11.03□□□□□ -0.64
UBBP4-201ENST00000583708 USP17L5A8MUK1 530 aa11.02□□□□□ -0.65
UBBP4-201ENST00000583708 UBE2Q2LH0YL09 131 aa11.02□□□□□ -0.65
UBBP4-201ENST00000583708 CXCL11O14625 94 aa11.02□□□□□ -0.65
UBBP4-201ENST00000583708 HSPA6P17066 643 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms