RNA–Protein interactions for RNA: ENST00000583441.1

SMCHD1-209, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 657 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-209ENST00000583441 OVOL3O00110 214 aa6.89□□□□□ -1.31
SMCHD1-209ENST00000583441 KIF4BQ2VIQ3 1234 aa6.89□□□□□ -1.31
SMCHD1-209ENST00000583441 CRELD1Q96HD1 420 aa6.89□□□□□ -1.31
SMCHD1-209ENST00000583441 HSPA12BQ96MM6 686 aa6.89□□□□□ -1.31
SMCHD1-209ENST00000583441 PRDM10Q9NQV6 1147 aa6.89□□□□□ -1.31
SMCHD1-209ENST00000583441 KCTD3Q9Y597 815 aa6.89□□□□□ -1.31
SMCHD1-209ENST00000583441 ZNF862O60290 1169 aa6.88□□□□□ -1.31
SMCHD1-209ENST00000583441 NEFMP07197 916 aa6.88□□□□□ -1.31
SMCHD1-209ENST00000583441 TMEM132EQ6IEE7 984 aa6.88□□□□□ -1.31
SMCHD1-209ENST00000583441 TCF12Q99081 682 aa6.88□□□□□ -1.31
SMCHD1-209ENST00000583441 FOXQ1Q9C009 403 aa6.88□□□□□ -1.31
SMCHD1-209ENST00000583441 MCOLN1Q9GZU1 580 aa6.88□□□□□ -1.31
SMCHD1-209ENST00000583441 SEMA3GQ9NS98 782 aa6.88□□□□□ -1.31
SMCHD1-209ENST00000583441 SLAMF8Q9P0V8 285 aa6.88□□□□□ -1.31
SMCHD1-209ENST00000583441 A0A1W2PP55 124 aa6.87□□□□□ -1.31
SMCHD1-209ENST00000583441 FAM155AB1AL88 458 aaPredicted RBP6.87□□□□□ -1.31
SMCHD1-209ENST00000583441 POLR3DP05423 398 aaPredicted RBP6.87□□□□□ -1.31
SMCHD1-209ENST00000583441 PDE4CQ08493 712 aa6.87□□□□□ -1.31
SMCHD1-209ENST00000583441 PCDHGC5Q9Y5F6 944 aa6.87□□□□□ -1.31
SMCHD1-209ENST00000583441 AKAP8O43823 692 aaKnown RBP6.86□□□□□ -1.31
SMCHD1-209ENST00000583441 SEMA7AO75326 666 aa6.86□□□□□ -1.31
SMCHD1-209ENST00000583441 PDIA4P13667 645 aaKnown RBP6.86□□□□□ -1.31
SMCHD1-209ENST00000583441 EHHADHQ08426 723 aa6.86□□□□□ -1.31
SMCHD1-209ENST00000583441 FAM69CQ0P6D2 419 aa6.86□□□□□ -1.31
SMCHD1-209ENST00000583441 PBXIP1Q96AQ6 731 aa6.86□□□□□ -1.31
SMCHD1-209ENST00000583441 ZNF576Q9H609 170 aa6.86□□□□□ -1.31
SMCHD1-209ENST00000583441 ZFYVE28Q9HCC9 887 aa6.86□□□□□ -1.31
SMCHD1-209ENST00000583441 POLIQ9UNA4 740 aa6.86□□□□□ -1.31
SMCHD1-209ENST00000583441 MYRFQ9Y2G1 1151 aa6.86□□□□□ -1.31
SMCHD1-209ENST00000583441 CFAP70Q5T0N1 1121 aa6.85□□□□□ -1.31
SMCHD1-209ENST00000583441 CDKAL1Q5VV42 579 aa6.85□□□□□ -1.31
SMCHD1-209ENST00000583441 GPR20Q99678 358 aa6.85□□□□□ -1.31
SMCHD1-209ENST00000583441 PRDM5Q9NQX1 630 aaPredicted RBP6.85□□□□□ -1.31
SMCHD1-209ENST00000583441 H3BS24 57 aa6.84□□□□□ -1.31
SMCHD1-209ENST00000583441 ERVFC1P60507 584 aa6.84□□□□□ -1.31
SMCHD1-209ENST00000583441 EFEMP1Q12805 493 aa6.84□□□□□ -1.31
SMCHD1-209ENST00000583441 ZNF605Q86T29 641 aa6.84□□□□□ -1.31
SMCHD1-209ENST00000583441 ZDHHC14Q8IZN3 488 aa6.84□□□□□ -1.31
SMCHD1-209ENST00000583441 RNF214Q8ND24 703 aa6.84□□□□□ -1.31
SMCHD1-209ENST00000583441 KRT82Q9NSB4 513 aa6.84□□□□□ -1.31
SMCHD1-209ENST00000583441 PEX10O60683 326 aa6.83□□□□□ -1.32
SMCHD1-209ENST00000583441 EIF1AXP47813 144 aaKnown RBP6.83□□□□□ -1.32
SMCHD1-209ENST00000583441 HK2P52789 917 aa6.83□□□□□ -1.32
SMCHD1-209ENST00000583441 PLP2Q04941 152 aa6.83□□□□□ -1.32
SMCHD1-209ENST00000583441 FEZF2Q8TBJ5 459 aa6.83□□□□□ -1.32
SMCHD1-209ENST00000583441 SEPT3Q9UH03 358 aa6.83□□□□□ -1.32
SMCHD1-209ENST00000583441 ADAMTS20P59510 1910 aa6.83□□□□□ -1.32
SMCHD1-209ENST00000583441 ZMIZ1Q9ULJ6 1067 aa6.82□□□□□ -1.32
SMCHD1-209ENST00000583441 MAPK8IP1Q9UQF2 711 aa6.82□□□□□ -1.32
SMCHD1-209ENST00000583441 MYOCOSA0A1B0GUC4 107 aa6.81□□□□□ -1.32
SMCHD1-209ENST00000583441 EOMESO95936 686 aa6.81□□□□□ -1.32
SMCHD1-209ENST00000583441 GSTP1P09211 210 aaKnown RBP6.81□□□□□ -1.32
SMCHD1-209ENST00000583441 AAMPQ13685 434 aa6.81□□□□□ -1.32
SMCHD1-209ENST00000583441 IRF2BP1Q8IU81 584 aa6.81□□□□□ -1.32
SMCHD1-209ENST00000583441 RNF32Q9H0A6 362 aa6.81□□□□□ -1.32
SMCHD1-209ENST00000583441 DNAJC25-GNG10A0A024R161 153 aa6.8□□□□□ -1.32
SMCHD1-209ENST00000583441 TEX51A0A1B0GUA7 166 aa6.8□□□□□ -1.32
SMCHD1-209ENST00000583441 HPXP02790 462 aa6.8□□□□□ -1.32
SMCHD1-209ENST00000583441 ITPKAP23677 461 aa6.8□□□□□ -1.32
SMCHD1-209ENST00000583441 ALKBH2Q6NS38 261 aa6.8□□□□□ -1.32
SMCHD1-209ENST00000583441 HELQQ8TDG4 1101 aa6.8□□□□□ -1.32
SMCHD1-209ENST00000583441 STK32AQ8WU08 396 aa6.8□□□□□ -1.32
SMCHD1-209ENST00000583441 TRAIPQ9BWF2 469 aa6.8□□□□□ -1.32
SMCHD1-209ENST00000583441 SLC6A17Q9H1V8 727 aa6.8□□□□□ -1.32
SMCHD1-209ENST00000583441 DNAJC25Q9H1X3 360 aa6.8□□□□□ -1.32
SMCHD1-209ENST00000583441 TMEM59LQ9UK28 342 aa6.8□□□□□ -1.32
SMCHD1-209ENST00000583441 USP5P45974 858 aa6.79□□□□□ -1.32
SMCHD1-209ENST00000583441 ZNF157P51786 506 aaPredicted RBP6.79□□□□□ -1.32
SMCHD1-209ENST00000583441 ERVK-24P63145 666 aa6.79□□□□□ -1.32
SMCHD1-209ENST00000583441 SRPK2P78362 688 aaKnown RBP6.79□□□□□ -1.32
SMCHD1-209ENST00000583441 ELOAQ14241 798 aaKnown RBP6.79□□□□□ -1.32
SMCHD1-209ENST00000583441 SSPNQ14714 243 aa6.79□□□□□ -1.32
SMCHD1-209ENST00000583441 RALGPS1Q5JS13 557 aa6.79□□□□□ -1.32
SMCHD1-209ENST00000583441 GALNT12Q8IXK2 581 aa6.79□□□□□ -1.32
SMCHD1-209ENST00000583441 RETREG2Q8NC44 543 aa6.79□□□□□ -1.32
SMCHD1-209ENST00000583441 KCNB2Q92953 911 aa6.79□□□□□ -1.32
SMCHD1-209ENST00000583441 TEPSINQ96N21 525 aa6.79□□□□□ -1.32
SMCHD1-209ENST00000583441 SGPP1Q9BX95 441 aa6.79□□□□□ -1.32
SMCHD1-209ENST00000583441 SRRDQ9UH36 339 aa6.79□□□□□ -1.32
SMCHD1-209ENST00000583441 USTQ9Y2C2 406 aa6.79□□□□□ -1.32
SMCHD1-209ENST00000583441 MFSD4AQ8N468 514 aa6.78□□□□□ -1.32
SMCHD1-209ENST00000583441 GCM1Q9NP62 436 aa6.78□□□□□ -1.32
SMCHD1-209ENST00000583441 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.77□□□□□ -1.33
SMCHD1-209ENST00000583441 MPSTP25325 297 aa6.77□□□□□ -1.33
SMCHD1-209ENST00000583441 TRHRP34981 398 aaPredicted RBP6.77□□□□□ -1.33
SMCHD1-209ENST00000583441 AFF3P51826 1226 aaKnown RBP6.77□□□□□ -1.33
SMCHD1-209ENST00000583441 ZXDAP98168 799 aa6.77□□□□□ -1.33
SMCHD1-209ENST00000583441 ZC3H12AQ5D1E8 599 aaKnown RBP6.77□□□□□ -1.33
SMCHD1-209ENST00000583441 THAP5Q7Z6K1 395 aa6.77□□□□□ -1.33
SMCHD1-209ENST00000583441 UBE2FQ969M7 185 aa6.77□□□□□ -1.33
SMCHD1-209ENST00000583441 EHD4Q9H223 541 aa6.77□□□□□ -1.33
SMCHD1-209ENST00000583441 PALD1Q9ULE6 856 aa6.77□□□□□ -1.33
SMCHD1-209ENST00000583441 PRR33A8MZF0 331 aa6.76□□□□□ -1.33
SMCHD1-209ENST00000583441 ATG7O95352 703 aa6.76□□□□□ -1.33
SMCHD1-209ENST00000583441 PI3P19957 117 aa6.76□□□□□ -1.33
SMCHD1-209ENST00000583441 PTPN12Q05209 780 aaKnown RBP6.76□□□□□ -1.33
SMCHD1-209ENST00000583441 BDH2Q9BUT1 245 aa6.76□□□□□ -1.33
SMCHD1-209ENST00000583441 ZBTB7CA1YPR0 619 aa6.75□□□□□ -1.33
SMCHD1-209ENST00000583441 PATL2C9JE40 543 aaKnown RBP6.75□□□□□ -1.33
SMCHD1-209ENST00000583441 RPS26P11Q5JNZ5 115 aaPredicted RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms