RNA–Protein interactions for RNA: ENST00000582985.1

DDX42-215, Transcript of DEAD-box helicase 42, human

TSL 4

Gene DDX42, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX42-215	ENST00000582985	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	11.8	□□□□□ -0.52
DDX42-215	ENST00000582985	DOCK1	Q14185	1865 aa		11.8	□□□□□ -0.52
DDX42-215	ENST00000582985	TBC1D12	O60347	775 aa		11.79	□□□□□ -0.52
DDX42-215	ENST00000582985	PI16	Q6UXB8	463 aa		11.79	□□□□□ -0.52
DDX42-215	ENST00000582985	CCDC84	Q86UT8	332 aa	Predicted RBP	11.79	□□□□□ -0.52
DDX42-215	ENST00000582985	SPATA5	Q8NB90	893 aa		11.79	□□□□□ -0.52
DDX42-215	ENST00000582985	SMCR8	Q8TEV9	937 aa	Predicted RBP	11.79	□□□□□ -0.52
DDX42-215	ENST00000582985	HMG20B	Q9P0W2	317 aa		11.79	□□□□□ -0.52
DDX42-215	ENST00000582985	PHIP	Q8WWQ0	1821 aa		11.79	□□□□□ -0.52
DDX42-215	ENST00000582985	MGAM	O43451	1857 aa		11.78	□□□□□ -0.52
DDX42-215	ENST00000582985	PTPRF	P10586	1907 aa		11.78	□□□□□ -0.52
DDX42-215	ENST00000582985	ADCY3	O60266	1144 aa		11.78	□□□□□ -0.52
DDX42-215	ENST00000582985	FLT3LG	P49771	235 aa		11.78	□□□□□ -0.52
DDX42-215	ENST00000582985	CLCN6	P51797	869 aa		11.78	□□□□□ -0.52
DDX42-215	ENST00000582985	GSTO1	P78417	241 aa		11.78	□□□□□ -0.52
DDX42-215	ENST00000582985	GORAB	Q5T7V8	394 aa		11.78	□□□□□ -0.52
DDX42-215	ENST00000582985	TBC1D9	Q6ZT07	1266 aa		11.78	□□□□□ -0.52
DDX42-215	ENST00000582985	UBE2Q1	Q7Z7E8	422 aa		11.78	□□□□□ -0.52
DDX42-215	ENST00000582985	U2AF1L4	Q8WU68	220 aa	Known RBP	11.78	□□□□□ -0.52
DDX42-215	ENST00000582985	DPF3	Q92784	378 aa		11.78	□□□□□ -0.52
DDX42-215	ENST00000582985	NSUN4	Q96CB9	384 aa	Known RBP	11.78	□□□□□ -0.52
DDX42-215	ENST00000582985	DCBLD2	Q96PD2	775 aa		11.78	□□□□□ -0.52
DDX42-215	ENST00000582985	UNC93B1	Q9H1C4	597 aa		11.78	□□□□□ -0.52
DDX42-215	ENST00000582985	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	11.78	□□□□□ -0.52
DDX42-215	ENST00000582985	AGTPBP1	Q9UPW5	1226 aa		11.78	□□□□□ -0.52
DDX42-215	ENST00000582985	FAM196B	A6NMK8	535 aa		11.77	□□□□□ -0.53
DDX42-215	ENST00000582985	TNPO2	O14787	897 aa	Known RBP	11.77	□□□□□ -0.53
DDX42-215	ENST00000582985	MAP4K4	O95819	1239 aa	Predicted RBP	11.77	□□□□□ -0.53
DDX42-215	ENST00000582985	GNAI2	P04899	355 aa		11.77	□□□□□ -0.53
DDX42-215	ENST00000582985	LDHC	P07864	332 aa		11.77	□□□□□ -0.53
DDX42-215	ENST00000582985	TRIM27	P14373	513 aa		11.77	□□□□□ -0.53
DDX42-215	ENST00000582985	ARID4A	P29374	1257 aa	Predicted RBP	11.77	□□□□□ -0.53
DDX42-215	ENST00000582985	TREML2	Q5T2D2	321 aa		11.77	□□□□□ -0.53
DDX42-215	ENST00000582985	HTATIP2	Q9BUP3	242 aa		11.77	□□□□□ -0.53
DDX42-215	ENST00000582985	OSBPL5	Q9H0X9	879 aa	Predicted RBP	11.77	□□□□□ -0.53
DDX42-215	ENST00000582985	RAI14	Q9P0K7	980 aa		11.77	□□□□□ -0.53
DDX42-215	ENST00000582985	COL2A1	P02458	1487 aa	Predicted RBP	11.76	□□□□□ -0.53
DDX42-215	ENST00000582985	TRIOBP	Q9H2D6	2365 aa		11.76	□□□□□ -0.53
DDX42-215	ENST00000582985	PNMA6E	A0A0J9YXQ4	647 aa		11.76	□□□□□ -0.53
DDX42-215	ENST00000582985	IPO8	O15397	1037 aa	Known RBP	11.76	□□□□□ -0.53
DDX42-215	ENST00000582985	INHA	P05111	366 aa		11.76	□□□□□ -0.53
DDX42-215	ENST00000582985	ELN	P15502	786 aa		11.76	□□□□□ -0.53
DDX42-215	ENST00000582985	MCAM	P43121	646 aa		11.76	□□□□□ -0.53
DDX42-215	ENST00000582985	G3BP1	Q13283	466 aa	Known RBP eCLIP	11.76	□□□□□ -0.53	8e-7	■■□□□ 13.3
DDX42-215	ENST00000582985	IRF5	Q13568	498 aa		11.76	□□□□□ -0.53
DDX42-215	ENST00000582985	ANKRD13C	Q8N6S4	541 aa		11.76	□□□□□ -0.53
DDX42-215	ENST00000582985	PROCA1	Q8NCQ7	364 aa	Predicted RBP	11.76	□□□□□ -0.53
DDX42-215	ENST00000582985	PXYLP1	Q8TE99	480 aa		11.76	□□□□□ -0.53
DDX42-215	ENST00000582985	PHF12	Q96QT6	1004 aa		11.76	□□□□□ -0.53
DDX42-215	ENST00000582985	PNMA3	Q9UL41	463 aa		11.76	□□□□□ -0.53
DDX42-215	ENST00000582985	TNN	Q9UQP3	1299 aa		11.76	□□□□□ -0.53
DDX42-215	ENST00000582985	FARP2	O94887	1054 aa	Predicted RBP	11.75	□□□□□ -0.53
DDX42-215	ENST00000582985	SGPL1	O95470	568 aa		11.75	□□□□□ -0.53
DDX42-215	ENST00000582985	UQCRFS1P1	P0C7P4	283 aa		11.75	□□□□□ -0.53
DDX42-215	ENST00000582985	CAP2	P40123	477 aa		11.75	□□□□□ -0.53
DDX42-215	ENST00000582985	SPP2	Q13103	211 aa		11.75	□□□□□ -0.53
DDX42-215	ENST00000582985	FAM110C	Q1W6H9	321 aa		11.75	□□□□□ -0.53
DDX42-215	ENST00000582985	ATF7IP	Q6VMQ6	1270 aa		11.75	□□□□□ -0.53
DDX42-215	ENST00000582985	TEX11	Q8IYF3	940 aa		11.75	□□□□□ -0.53
DDX42-215	ENST00000582985	ZNF280C	Q8ND82	737 aa		11.75	□□□□□ -0.53
DDX42-215	ENST00000582985	FRAT1	Q92837	279 aa	Predicted RBP	11.75	□□□□□ -0.53
DDX42-215	ENST00000582985	COA7	Q96BR5	231 aa		11.75	□□□□□ -0.53
DDX42-215	ENST00000582985	TBC1D2	Q9BYX2	928 aa		11.75	□□□□□ -0.53
DDX42-215	ENST00000582985	LRP2BP	Q9P2M1	347 aa		11.75	□□□□□ -0.53
DDX42-215	ENST00000582985	CCER2	I3L3R5	266 aa		11.74	□□□□□ -0.53
DDX42-215	ENST00000582985	BCAR3	O75815	825 aa		11.74	□□□□□ -0.53
DDX42-215	ENST00000582985	HMGCS2	P54868	508 aa		11.74	□□□□□ -0.53
DDX42-215	ENST00000582985	RRP1B	Q14684	758 aa	Known RBP	11.74	□□□□□ -0.53
DDX42-215	ENST00000582985	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	11.74	□□□□□ -0.53
DDX42-215	ENST00000582985	CLUAP1	Q96AJ1	413 aa		11.74	□□□□□ -0.53
DDX42-215	ENST00000582985	RBM27	Q9P2N5	1060 aa	Known RBP	11.74	□□□□□ -0.53
DDX42-215	ENST00000582985	HERC5	Q9UII4	1024 aa	Known RBP	11.74	□□□□□ -0.53
DDX42-215	ENST00000582985	TAOK2	Q9UL54	1235 aa		11.74	□□□□□ -0.53
DDX42-215	ENST00000582985	LOC285556	D6RIA3	1793 aa		11.74	□□□□□ -0.53
DDX42-215	ENST00000582985	USP17L5	A8MUK1	530 aa		11.73	□□□□□ -0.53
DDX42-215	ENST00000582985	TFRC	P02786	760 aa	Known RBP	11.73	□□□□□ -0.53
DDX42-215	ENST00000582985	GCLC	P48506	637 aa	Predicted RBP	11.73	□□□□□ -0.53
DDX42-215	ENST00000582985	PABPC4	Q13310	644 aa	Known RBP eCLIP	11.73	□□□□□ -0.53
DDX42-215	ENST00000582985	DEFB118	Q96PH6	123 aa		11.73	□□□□□ -0.53
DDX42-215	ENST00000582985	NOL10	Q9BSC4	688 aa	Known RBP	11.73	□□□□□ -0.53
DDX42-215	ENST00000582985	ASCC2	Q9H1I8	757 aa	Predicted RBP	11.73	□□□□□ -0.53
DDX42-215	ENST00000582985	PAK6	Q9NQU5	681 aa	Predicted RBP	11.73	□□□□□ -0.53
DDX42-215	ENST00000582985	SNRK	Q9NRH2	765 aa		11.73	□□□□□ -0.53
DDX42-215	ENST00000582985	NR2E3	Q9Y5X4	410 aa		11.73	□□□□□ -0.53
DDX42-215	ENST00000582985	RANBP2	P49792	3224 aa	Known RBP	11.73	□□□□□ -0.53
DDX42-215	ENST00000582985	ATAD5	Q96QE3	1844 aa		11.72	□□□□□ -0.53
DDX42-215	ENST00000582985	ZBTB7B	O15156	539 aa	Predicted RBP	11.72	□□□□□ -0.53
DDX42-215	ENST00000582985	BAG3	O95817	575 aa		11.72	□□□□□ -0.53
DDX42-215	ENST00000582985	CAPN2	P17655	700 aa		11.72	□□□□□ -0.53
DDX42-215	ENST00000582985	TNNI3K	Q59H18	835 aa		11.72	□□□□□ -0.53
DDX42-215	ENST00000582985	SH3D19	Q5HYK7	790 aa		11.72	□□□□□ -0.53
DDX42-215	ENST00000582985	TTC39A	Q5SRH9	613 aa		11.72	□□□□□ -0.53
DDX42-215	ENST00000582985	NAA16	Q6N069	864 aa	Predicted RBP	11.72	□□□□□ -0.53
DDX42-215	ENST00000582985	DHX36	Q9H2U1	1008 aa	Known RBP	11.72	□□□□□ -0.53
DDX42-215	ENST00000582985	PRO3102	Q9H379	93 aa		11.72	□□□□□ -0.53
DDX42-215	ENST00000582985	AS3MT	Q9HBK9	375 aa		11.72	□□□□□ -0.53
DDX42-215	ENST00000582985	GPR108	Q9NPR9	543 aa		11.72	□□□□□ -0.53
DDX42-215	ENST00000582985	AATF	Q9NY61	560 aa	Known RBP eCLIP	11.72	□□□□□ -0.53
DDX42-215	ENST00000582985	PI4KB	Q9UBF8	816 aa		11.72	□□□□□ -0.53
DDX42-215	ENST00000582985	FPGT-TNNI3K	V9GXZ4	949 aa		11.72	□□□□□ -0.53

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