RNA–Protein interactions for RNA: ENST00000582833.5

NUP85-219, Transcript of nucleoporin 85, humanhuman

TSL 5

Gene NUP85, Length 453 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-219ENST00000582833 JAG1P78504 1218 aa11.14□□□□□ -0.63
NUP85-219ENST00000582833 ATP8B2P98198 1209 aa11.14□□□□□ -0.63
NUP85-219ENST00000582833 SPP2Q13103 211 aa11.14□□□□□ -0.63
NUP85-219ENST00000582833 G3BP1Q13283 466 aaKnown RBP eCLIP11.14□□□□□ -0.63
NUP85-219ENST00000582833 METTL16Q86W50 562 aaKnown RBP11.14□□□□□ -0.63
NUP85-219ENST00000582833 NKX2-3Q8TAU0 364 aa11.14□□□□□ -0.63
NUP85-219ENST00000582833 SSH3Q8TE77 659 aa11.14□□□□□ -0.63
NUP85-219ENST00000582833 PXYLP1Q8TE99 480 aa11.14□□□□□ -0.63
NUP85-219ENST00000582833 CLUAP1Q96AJ1 413 aa11.14□□□□□ -0.63
NUP85-219ENST00000582833 RNF208Q9H0X6 261 aa11.14□□□□□ -0.63
NUP85-219ENST00000582833 UNC93B1Q9H1C4 597 aa11.14□□□□□ -0.63
NUP85-219ENST00000582833 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.14□□□□□ -0.63
NUP85-219ENST00000582833 GPR108Q9NPR9 543 aa11.14□□□□□ -0.63
NUP85-219ENST00000582833 COL2A1P02458 1487 aaPredicted RBP11.13□□□□□ -0.63
NUP85-219ENST00000582833 ADCY3O60266 1144 aa11.13□□□□□ -0.63
NUP85-219ENST00000582833 SGPL1O95470 568 aa11.13□□□□□ -0.63
NUP85-219ENST00000582833 UQCRFS1P1P0C7P4 283 aa11.13□□□□□ -0.63
NUP85-219ENST00000582833 SH3D19Q5HYK7 790 aa11.13□□□□□ -0.63
NUP85-219ENST00000582833 ADGRA1Q86SQ6 560 aa11.13□□□□□ -0.63
NUP85-219ENST00000582833 TMEM57Q8N5G2 664 aa11.13□□□□□ -0.63
NUP85-219ENST00000582833 ANKRD13CQ8N6S4 541 aa11.13□□□□□ -0.63
NUP85-219ENST00000582833 PROCA1Q8NCQ7 364 aaPredicted RBP11.13□□□□□ -0.63
NUP85-219ENST00000582833 ZNF280CQ8ND82 737 aa11.13□□□□□ -0.63
NUP85-219ENST00000582833 SLAIN1Q8ND83 568 aa11.13□□□□□ -0.63
NUP85-219ENST00000582833 SH3RF3Q8TEJ3 882 aaPredicted RBP11.13□□□□□ -0.63
NUP85-219ENST00000582833 FRAT1Q92837 279 aaPredicted RBP11.13□□□□□ -0.63
NUP85-219ENST00000582833 PRO3102Q9H379 93 aa11.13□□□□□ -0.63
NUP85-219ENST00000582833 RAI14Q9P0K7 980 aa11.13□□□□□ -0.63
NUP85-219ENST00000582833 GJD2Q9UKL4 321 aa11.13□□□□□ -0.63
NUP85-219ENST00000582833 DOCK1Q14185 1865 aa11.12□□□□□ -0.63
NUP85-219ENST00000582833 PHIPQ8WWQ0 1821 aa11.12□□□□□ -0.63
NUP85-219ENST00000582833 ATAD5Q96QE3 1844 aa11.12□□□□□ -0.63
NUP85-219ENST00000582833 CYP2E1P05181 493 aaPredicted RBP11.12□□□□□ -0.63
NUP85-219ENST00000582833 ELNP15502 786 aa11.12□□□□□ -0.63
NUP85-219ENST00000582833 UBXN2AP68543 259 aa11.12□□□□□ -0.63
NUP85-219ENST00000582833 TNNI3KQ59H18 835 aa11.12□□□□□ -0.63
NUP85-219ENST00000582833 GORABQ5T7V8 394 aa11.12□□□□□ -0.63
NUP85-219ENST00000582833 U2AF1L4Q8WU68 220 aaKnown RBP11.12□□□□□ -0.63
NUP85-219ENST00000582833 ZNF512BQ96KM6 892 aaPredicted RBP11.12□□□□□ -0.63
NUP85-219ENST00000582833 DBNDD2Q9BQY9 259 aa11.12□□□□□ -0.63
NUP85-219ENST00000582833 WDR18Q9BV38 432 aa11.12□□□□□ -0.63
NUP85-219ENST00000582833 SNRKQ9NRH2 765 aa11.12□□□□□ -0.63
NUP85-219ENST00000582833 PI4KBQ9UBF8 816 aa11.12□□□□□ -0.63
NUP85-219ENST00000582833 NOP58Q9Y2X3 529 aaKnown RBP11.12□□□□□ -0.63
NUP85-219ENST00000582833 FPGT-TNNI3KV9GXZ4 949 aa11.12□□□□□ -0.63
NUP85-219ENST00000582833 USP17L5A8MUK1 530 aa11.11□□□□□ -0.63
NUP85-219ENST00000582833 ZBTB7BO15156 539 aaPredicted RBP11.11□□□□□ -0.63
NUP85-219ENST00000582833 INHAP05111 366 aa11.11□□□□□ -0.63
NUP85-219ENST00000582833 FAM110CQ1W6H9 321 aa11.11□□□□□ -0.63
NUP85-219ENST00000582833 ZKSCAN2Q63HK3 967 aa11.11□□□□□ -0.63
NUP85-219ENST00000582833 TEX11Q8IYF3 940 aa11.11□□□□□ -0.63
NUP85-219ENST00000582833 TBC1D2Q9BYX2 928 aa11.11□□□□□ -0.63
NUP85-219ENST00000582833 CRISPLD2Q9H0B8 497 aa11.11□□□□□ -0.63
NUP85-219ENST00000582833 DNAJC18Q9H819 358 aa11.11□□□□□ -0.63
NUP85-219ENST00000582833 PAK6Q9NQU5 681 aaPredicted RBP11.11□□□□□ -0.63
NUP85-219ENST00000582833 LRP2BPQ9P2M1 347 aa11.11□□□□□ -0.63
NUP85-219ENST00000582833 BIN2Q9UBW5 565 aaPredicted RBP11.11□□□□□ -0.63
NUP85-219ENST00000582833 HERC5Q9UII4 1024 aaKnown RBP11.11□□□□□ -0.63
NUP85-219ENST00000582833 TNPO2O14787 897 aaKnown RBP11.1□□□□□ -0.63
NUP85-219ENST00000582833 IGSF3O75054 1194 aa11.1□□□□□ -0.63
NUP85-219ENST00000582833 RLBP1P12271 317 aa11.1□□□□□ -0.63
NUP85-219ENST00000582833 HMGCS2P54868 508 aa11.1□□□□□ -0.63
NUP85-219ENST00000582833 SHROOM1Q2M3G4 852 aaPredicted RBP11.1□□□□□ -0.63
NUP85-219ENST00000582833 NAA16Q6N069 864 aaPredicted RBP11.1□□□□□ -0.63
NUP85-219ENST00000582833 POTEEQ6S8J3 1075 aa11.1□□□□□ -0.63
NUP85-219ENST00000582833 FOXP4Q8IVH2 680 aaPredicted RBP11.1□□□□□ -0.63
NUP85-219ENST00000582833 SMCR8Q8TEV9 937 aaPredicted RBP11.1□□□□□ -0.63
NUP85-219ENST00000582833 DPF3Q92784 378 aa11.1□□□□□ -0.63
NUP85-219ENST00000582833 ASCC2Q9H1I8 757 aaPredicted RBP11.1□□□□□ -0.63
NUP85-219ENST00000582833 DHX36Q9H2U1 1008 aaKnown RBP11.1□□□□□ -0.63
NUP85-219ENST00000582833 PIH1D3Q9NQM4 214 aaKnown RBP11.1□□□□□ -0.63
NUP85-219ENST00000582833 AATFQ9NY61 560 aaKnown RBP eCLIP11.1□□□□□ -0.63
NUP85-219ENST00000582833 RBM27Q9P2N5 1060 aaKnown RBP11.1□□□□□ -0.63
NUP85-219ENST00000582833 COL6A3P12111 3177 aa11.1□□□□□ -0.63
NUP85-219ENST00000582833 SURF6O75683 361 aaKnown RBP11.09□□□□□ -0.63
NUP85-219ENST00000582833 CAPN2P17655 700 aa11.09□□□□□ -0.63
NUP85-219ENST00000582833 HOXA7P31268 230 aaPredicted RBP11.09□□□□□ -0.63
NUP85-219ENST00000582833 ZAP70P43403 619 aa11.09□□□□□ -0.63
NUP85-219ENST00000582833 GCLCP48506 637 aaPredicted RBP11.09□□□□□ -0.63
NUP85-219ENST00000582833 BACE1P56817 501 aa11.09□□□□□ -0.63
NUP85-219ENST00000582833 CHRDL2Q6WN34 429 aa11.09□□□□□ -0.63
NUP85-219ENST00000582833 TGFBRAP1Q8WUH2 860 aa11.09□□□□□ -0.63
NUP85-219ENST00000582833 COA7Q96BR5 231 aa11.09□□□□□ -0.63
NUP85-219ENST00000582833 EAF2Q96CJ1 260 aaPredicted RBP11.09□□□□□ -0.63
NUP85-219ENST00000582833 MORF4L1Q9UBU8 362 aa11.09□□□□□ -0.63
NUP85-219ENST00000582833 DBNLQ9UJU6 430 aaKnown RBP11.09□□□□□ -0.63
NUP85-219ENST00000582833 PNMA3Q9UL41 463 aa11.09□□□□□ -0.63
NUP85-219ENST00000582833 PALD1Q9ULE6 856 aa11.09□□□□□ -0.63
NUP85-219ENST00000582833 FLT1P17948 1338 aa11.09□□□□□ -0.63
NUP85-219ENST00000582833 CUL9Q8IWT3 2517 aa11.08□□□□□ -0.64
NUP85-219ENST00000582833 PEX10O60683 326 aa11.08□□□□□ -0.64
NUP85-219ENST00000582833 FARP2O94887 1054 aaPredicted RBP11.08□□□□□ -0.64
NUP85-219ENST00000582833 BAG3O95817 575 aa11.08□□□□□ -0.64
NUP85-219ENST00000582833 PLCG2P16885 1265 aa11.08□□□□□ -0.64
NUP85-219ENST00000582833 MNX1P50219 401 aaPredicted RBP11.08□□□□□ -0.64
NUP85-219ENST00000582833 CCDC158Q5M9N0 1113 aa11.08□□□□□ -0.64
NUP85-219ENST00000582833 TTC39AQ5SRH9 613 aa11.08□□□□□ -0.64
NUP85-219ENST00000582833 MAPKAPK5Q8IW41 473 aa11.08□□□□□ -0.64
NUP85-219ENST00000582833 DEFB118Q96PH6 123 aa11.08□□□□□ -0.64
NUP85-219ENST00000582833 P2RX7Q99572 595 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms