RNA–Protein interactions for RNA: ENST00000582242.1

CDH8-207, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-207ENST00000582242 DMRTC2Q8IXT2 367 aaPredicted RBP11.53□□□□□ -0.56
CDH8-207ENST00000582242 PCDHA4Q9UN74 947 aa11.53□□□□□ -0.56
CDH8-207ENST00000582242 POLR3KQ9Y2Y1 108 aaPredicted RBP11.53□□□□□ -0.56
CDH8-207ENST00000582242 PDS5BQ9NTI5 1447 aa11.52□□□□□ -0.56
CDH8-207ENST00000582242 KLF4O43474 513 aa11.52□□□□□ -0.57
CDH8-207ENST00000582242 ZNF862O60290 1169 aa11.52□□□□□ -0.57
CDH8-207ENST00000582242 ATE1O95260 518 aa11.52□□□□□ -0.57
CDH8-207ENST00000582242 CLCQ05315 142 aa11.52□□□□□ -0.57
CDH8-207ENST00000582242 GIMAP6Q6P9H5 292 aa11.52□□□□□ -0.57
CDH8-207ENST00000582242 LINC00114Q6XXX2 140 aa11.52□□□□□ -0.57
CDH8-207ENST00000582242 GK5Q6ZS86 529 aa11.52□□□□□ -0.57
CDH8-207ENST00000582242 OR6P1Q8NGX9 317 aa11.52□□□□□ -0.57
CDH8-207ENST00000582242 DCAF11Q8TEB1 546 aa11.52□□□□□ -0.57
CDH8-207ENST00000582242 ZSWIM4Q9H7M6 989 aa11.52□□□□□ -0.57
CDH8-207ENST00000582242 SNCAIPQ9Y6H5 919 aa11.52□□□□□ -0.57
CDH8-207ENST00000582242 THOC2Q8NI27 1593 aaKnown RBP11.52□□□□□ -0.57
CDH8-207ENST00000582242 LOC100289279A0A1B0GTE1 492 aa11.51□□□□□ -0.57
CDH8-207ENST00000582242 GFRA2O00451 464 aa11.51□□□□□ -0.57
CDH8-207ENST00000582242 SMARCA5O60264 1052 aaPredicted RBP11.51□□□□□ -0.57
CDH8-207ENST00000582242 NLRP12P59046 1061 aa11.51□□□□□ -0.57
CDH8-207ENST00000582242 PDE3AQ14432 1141 aa11.51□□□□□ -0.57
CDH8-207ENST00000582242 KIF4BQ2VIQ3 1234 aa11.51□□□□□ -0.57
CDH8-207ENST00000582242 TNNI3KQ59H18 835 aa11.51□□□□□ -0.57
CDH8-207ENST00000582242 WIPI1Q5MNZ9 446 aaPredicted RBP11.51□□□□□ -0.57
CDH8-207ENST00000582242 RBBP8NLQ8NC74 664 aaPredicted RBP11.51□□□□□ -0.57
CDH8-207ENST00000582242 USP26Q9BXU7 913 aa11.51□□□□□ -0.57
CDH8-207ENST00000582242 PRR36Q9H6K5 1346 aa11.51□□□□□ -0.57
CDH8-207ENST00000582242 FMN1Q68DA7 1419 aa11.51□□□□□ -0.57
CDH8-207ENST00000582242 CASKIN1Q8WXD9 1431 aa11.51□□□□□ -0.57
CDH8-207ENST00000582242 RAD54L2Q9Y4B4 1467 aa11.51□□□□□ -0.57
CDH8-207ENST00000582242 ADAM11O75078 769 aa11.5□□□□□ -0.57
CDH8-207ENST00000582242 DEAF1O75398 565 aaPredicted RBP11.5□□□□□ -0.57
CDH8-207ENST00000582242 CD68P34810 354 aaPredicted RBP11.5□□□□□ -0.57
CDH8-207ENST00000582242 CDK8P49336 464 aa11.5□□□□□ -0.57
CDH8-207ENST00000582242 FOXD4L6Q3SYB3 417 aaPredicted RBP11.5□□□□□ -0.57
CDH8-207ENST00000582242 FOXD4L3Q6VB84 417 aaPredicted RBP11.5□□□□□ -0.57
CDH8-207ENST00000582242 PLPPR2Q96GM1 343 aa11.5□□□□□ -0.57
CDH8-207ENST00000582242 CRBNQ96SW2 442 aa11.5□□□□□ -0.57
CDH8-207ENST00000582242 PIF1Q9H611 641 aa11.5□□□□□ -0.57
CDH8-207ENST00000582242 PCDHB14Q9Y5E9 798 aa11.5□□□□□ -0.57
CDH8-207ENST00000582242 TACC3Q9Y6A5 838 aa11.5□□□□□ -0.57
CDH8-207ENST00000582242 URB2Q14146 1524 aaKnown RBP11.5□□□□□ -0.57
CDH8-207ENST00000582242 RAB33AQ14088 237 aa11.49□□□□□ -0.57
CDH8-207ENST00000582242 INPP5AQ14642 412 aa11.49□□□□□ -0.57
CDH8-207ENST00000582242 LRFN4Q6PJG9 635 aa11.49□□□□□ -0.57
CDH8-207ENST00000582242 FAM177A1Q8N128 213 aaPredicted RBP11.49□□□□□ -0.57
CDH8-207ENST00000582242 FAM169BQ8N8A8 192 aa11.49□□□□□ -0.57
CDH8-207ENST00000582242 MKL1Q969V6 931 aa11.49□□□□□ -0.57
CDH8-207ENST00000582242 SIRPGQ9P1W8 387 aa11.49□□□□□ -0.57
CDH8-207ENST00000582242 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.49□□□□□ -0.57
CDH8-207ENST00000582242 SAMD9Q5K651 1589 aa11.49□□□□□ -0.57
CDH8-207ENST00000582242 NESP48681 1621 aa11.49□□□□□ -0.57
CDH8-207ENST00000582242 FBXW10Q5XX13 1052 aa11.48□□□□□ -0.57
CDH8-207ENST00000582242 HDXQ7Z353 690 aa11.48□□□□□ -0.57
CDH8-207ENST00000582242 HNRNPLLQ8WVV9 542 aaKnown RBP11.48□□□□□ -0.57
CDH8-207ENST00000582242 WDR89Q96FK6 387 aaPredicted RBP11.48□□□□□ -0.57
CDH8-207ENST00000582242 SYNGAP1Q96PV0 1343 aa11.48□□□□□ -0.57
CDH8-207ENST00000582242 PIK3R2O00459 728 aa11.47□□□□□ -0.57
CDH8-207ENST00000582242 GNB5O14775 395 aa11.47□□□□□ -0.57
CDH8-207ENST00000582242 SMAD7O15105 426 aaKnown RBP11.47□□□□□ -0.57
CDH8-207ENST00000582242 DDX3YO15523 660 aaKnown RBP11.47□□□□□ -0.57
CDH8-207ENST00000582242 GRIN3BO60391 1043 aa11.47□□□□□ -0.57
CDH8-207ENST00000582242 LIG1P18858 919 aa11.47□□□□□ -0.57
CDH8-207ENST00000582242 NFE2L2Q16236 605 aa11.47□□□□□ -0.57
CDH8-207ENST00000582242 LSRQ86X29 649 aaPredicted RBP11.47□□□□□ -0.57
CDH8-207ENST00000582242 TRIM55Q9BYV6 548 aa11.47□□□□□ -0.57
CDH8-207ENST00000582242 KCNK4Q9NYG8 393 aa11.47□□□□□ -0.57
CDH8-207ENST00000582242 PCDHGC5Q9Y5F6 944 aa11.47□□□□□ -0.57
CDH8-207ENST00000582242 CYFIP1Q7L576 1253 aa11.46□□□□□ -0.57
CDH8-207ENST00000582242 WDR18Q9BV38 432 aa11.46□□□□□ -0.57
CDH8-207ENST00000582242 R3HCC1Q9Y3T6 440 aaKnown RBP11.46□□□□□ -0.57
CDH8-207ENST00000582242 MEIS3P2A8K0S8 358 aa11.45□□□□□ -0.58
CDH8-207ENST00000582242 K7ELQ4 463 aaPredicted RBP11.45□□□□□ -0.58
CDH8-207ENST00000582242 HTR3BO95264 441 aa11.45□□□□□ -0.58
CDH8-207ENST00000582242 DLGAP3O95886 979 aa11.45□□□□□ -0.58
CDH8-207ENST00000582242 CANXP27824 592 aaKnown RBP11.45□□□□□ -0.58
CDH8-207ENST00000582242 BMS1Q14692 1282 aaKnown RBP11.45□□□□□ -0.58
CDH8-207ENST00000582242 ZC3H12AQ5D1E8 599 aaKnown RBP11.45□□□□□ -0.58
CDH8-207ENST00000582242 TRAPPC3LQ5T215 181 aa11.45□□□□□ -0.58
CDH8-207ENST00000582242 FBXO11Q86XK2 927 aa11.45□□□□□ -0.58
CDH8-207ENST00000582242 FMR1NBQ8N0W7 255 aaPredicted RBP11.45□□□□□ -0.58
CDH8-207ENST00000582242 ELMO3Q96BJ8 720 aa11.45□□□□□ -0.58
CDH8-207ENST00000582242 CDK11AQ9UQ88 783 aaPredicted RBP11.45□□□□□ -0.58
CDH8-207ENST00000582242 GAPVD1Q14C86 1478 aa11.44□□□□□ -0.58
CDH8-207ENST00000582242 SETD5Q9C0A6 1442 aa11.44□□□□□ -0.58
CDH8-207ENST00000582242 DLL1O00548 723 aa11.44□□□□□ -0.58
CDH8-207ENST00000582242 U2SURPO15042 1029 aaKnown RBP11.44□□□□□ -0.58
CDH8-207ENST00000582242 AOC2O75106 756 aa11.44□□□□□ -0.58
CDH8-207ENST00000582242 LRRFIP1Q32MZ4 808 aaKnown RBP11.44□□□□□ -0.58
CDH8-207ENST00000582242 FHOD3Q2V2M9 1422 aa11.43□□□□□ -0.58
CDH8-207ENST00000582242 PBRM1Q86U86 1689 aa11.43□□□□□ -0.58
CDH8-207ENST00000582242 A0A0A0MRY4 1105 aa11.43□□□□□ -0.58
CDH8-207ENST00000582242 SLFN14P0C7P3 912 aa11.43□□□□□ -0.58
CDH8-207ENST00000582242 ZNF746Q6NUN9 644 aaPredicted RBP11.43□□□□□ -0.58
CDH8-207ENST00000582242 C19orf47Q8N9M1 422 aaKnown RBP11.43□□□□□ -0.58
CDH8-207ENST00000582242 TRIM11Q96F44 468 aa11.43□□□□□ -0.58
CDH8-207ENST00000582242 ACTR10Q9NZ32 417 aa11.43□□□□□ -0.58
CDH8-207ENST00000582242 TMA7Q9Y2S6 64 aaKnown RBP11.43□□□□□ -0.58
CDH8-207ENST00000582242 RAB3GAP2Q9H2M9 1393 aa11.42□□□□□ -0.58
CDH8-207ENST00000582242 DCDC2CA8MYV0 355 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms