RNA–Protein interactions for RNA: ENST00000581790.5

NF1-221, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 1,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-221ENST00000581790 RAB6BQ9NRW1 208 aa7.88□□□□□ -1.15
NF1-221ENST00000581790 ATG3Q9NT62 314 aa7.88□□□□□ -1.15
NF1-221ENST00000581790 ECHDC1Q9NTX5 307 aa7.88□□□□□ -1.15
NF1-221ENST00000581790 ASAP1Q9ULH1 1129 aa7.88□□□□□ -1.15
NF1-221ENST00000581790 PA2G4Q9UQ80 394 aaKnown RBP7.88□□□□□ -1.15
NF1-221ENST00000581790 LAMA4Q16363 1823 aa7.87□□□□□ -1.15
NF1-221ENST00000581790 DDX60Q8IY21 1712 aaKnown RBP7.87□□□□□ -1.15
NF1-221ENST00000581790 SPATA31A5Q5VU36 1347 aa7.87□□□□□ -1.15
NF1-221ENST00000581790 SPATA31A7Q8IWB4 1347 aa7.87□□□□□ -1.15
NF1-221ENST00000581790 DYRK3O43781 588 aa7.87□□□□□ -1.15
NF1-221ENST00000581790 BNIP3LO60238 219 aa7.87□□□□□ -1.15
NF1-221ENST00000581790 USP17L8P0C7I0 530 aa7.87□□□□□ -1.15
NF1-221ENST00000581790 SPATA31C1P0DKV0 1188 aa7.87□□□□□ -1.15
NF1-221ENST00000581790 CHMLP26374 656 aa7.87□□□□□ -1.15
NF1-221ENST00000581790 RABL6Q3YEC7 729 aaPredicted RBP7.87□□□□□ -1.15
NF1-221ENST00000581790 HSP90AB3PQ58FF7 597 aa7.87□□□□□ -1.15
NF1-221ENST00000581790 EFHC2Q5JST6 749 aa7.87□□□□□ -1.15
NF1-221ENST00000581790 AACSQ86V21 672 aa7.87□□□□□ -1.15
NF1-221ENST00000581790 SYTL4Q96C24 671 aaPredicted RBP7.87□□□□□ -1.15
NF1-221ENST00000581790 ZNF330Q9Y3S2 320 aaPredicted RBP7.87□□□□□ -1.15
NF1-221ENST00000581790 CCDC9Q9Y3X0 531 aaKnown RBP7.87□□□□□ -1.15
NF1-221ENST00000581790 ARAP2Q8WZ64 1704 aa7.86□□□□□ -1.15
NF1-221ENST00000581790 JCADQ9P266 1359 aa7.86□□□□□ -1.15
NF1-221ENST00000581790 NHSQ6T4R5 1651 aa7.86□□□□□ -1.15
NF1-221ENST00000581790 MYH13Q9UKX3 1938 aa7.86□□□□□ -1.15
NF1-221ENST00000581790 MYO5AQ9Y4I1 1855 aaKnown RBP7.86□□□□□ -1.15
NF1-221ENST00000581790 UBAP1LF5GYI3 381 aa7.86□□□□□ -1.15
NF1-221ENST00000581790 HIP1O00291 1037 aa7.86□□□□□ -1.15
NF1-221ENST00000581790 SASH1O94885 1247 aa7.86□□□□□ -1.15
NF1-221ENST00000581790 HSP90AA1P07900 732 aaKnown RBP7.86□□□□□ -1.15
NF1-221ENST00000581790 CASP7P55210 303 aa7.86□□□□□ -1.15
NF1-221ENST00000581790 TCIRG1Q13488 830 aa7.86□□□□□ -1.15
NF1-221ENST00000581790 NFKBIBQ15653 356 aa7.86□□□□□ -1.15
NF1-221ENST00000581790 EPHA10Q5JZY3 1008 aa7.86□□□□□ -1.15
NF1-221ENST00000581790 NBPF11Q86T75 865 aa7.86□□□□□ -1.15
NF1-221ENST00000581790 IL27Q8NEV9 243 aa7.86□□□□□ -1.15
NF1-221ENST00000581790 RUFY2Q8WXA3 655 aa7.86□□□□□ -1.15
NF1-221ENST00000581790 TRIM11Q96F44 468 aa7.86□□□□□ -1.15
NF1-221ENST00000581790 KIF2CQ99661 725 aa7.86□□□□□ -1.15
NF1-221ENST00000581790 SIL1Q9H173 461 aa7.86□□□□□ -1.15
NF1-221ENST00000581790 TPSG1Q9NRR2 321 aa7.86□□□□□ -1.15
NF1-221ENST00000581790 CHMP5Q9NZZ3 219 aa7.86□□□□□ -1.15
NF1-221ENST00000581790 CHMP3Q9Y3E7 222 aa7.86□□□□□ -1.15
NF1-221ENST00000581790 TCHHQ07283 1943 aa7.86□□□□□ -1.15
NF1-221ENST00000581790 CHD4Q14839 1912 aa7.86□□□□□ -1.15
NF1-221ENST00000581790 MAP3K15Q6ZN16 1313 aa7.85□□□□□ -1.15
NF1-221ENST00000581790 A0A1B0GUL6 1792 aa7.85□□□□□ -1.15
NF1-221ENST00000581790 IL2RAP01589 272 aa7.85□□□□□ -1.15
NF1-221ENST00000581790 MSX1P28360 303 aa7.85□□□□□ -1.15
NF1-221ENST00000581790 RFX5P48382 616 aaPredicted RBP7.85□□□□□ -1.15
NF1-221ENST00000581790 ANAPC15P60006 121 aa7.85□□□□□ -1.15
NF1-221ENST00000581790 CENPCQ03188 943 aa7.85□□□□□ -1.15
NF1-221ENST00000581790 PTPN12Q05209 780 aaKnown RBP7.85□□□□□ -1.15
NF1-221ENST00000581790 UNC5CLQ8IV45 518 aa7.85□□□□□ -1.15
NF1-221ENST00000581790 CNKSR1Q969H4 720 aa7.85□□□□□ -1.15
NF1-221ENST00000581790 EVI5LQ96CN4 794 aa7.85□□□□□ -1.15
NF1-221ENST00000581790 ISCA1Q9BUE6 129 aa7.85□□□□□ -1.15
NF1-221ENST00000581790 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.85□□□□□ -1.15
NF1-221ENST00000581790 ANO2Q9NQ90 1003 aa7.85□□□□□ -1.15
NF1-221ENST00000581790 LY75O60449 1722 aa7.85□□□□□ -1.15
NF1-221ENST00000581790 THSD7AQ9UPZ6 1657 aa7.85□□□□□ -1.15
NF1-221ENST00000581790 AKAP11Q9UKA4 1901 aa7.84□□□□□ -1.15
NF1-221ENST00000581790 SCN7AQ01118 1682 aa7.84□□□□□ -1.15
NF1-221ENST00000581790 MAP4K4O95819 1239 aaPredicted RBP7.84□□□□□ -1.15
NF1-221ENST00000581790 CYP19A1P11511 503 aaPredicted RBP7.84□□□□□ -1.15
NF1-221ENST00000581790 IL6STP40189 918 aaPredicted RBP7.84□□□□□ -1.15
NF1-221ENST00000581790 FOXO4P98177 505 aa7.84□□□□□ -1.15
NF1-221ENST00000581790 TRIM28Q13263 835 aaKnown RBP7.84□□□□□ -1.15
NF1-221ENST00000581790 RNF20Q5VTR2 975 aa7.84□□□□□ -1.15
NF1-221ENST00000581790 LMBR1LQ6UX01 489 aa7.84□□□□□ -1.15
NF1-221ENST00000581790 KIAA1211Q6ZU35 1233 aa7.84□□□□□ -1.15
NF1-221ENST00000581790 KLHDC4Q8TBB5 520 aa7.84□□□□□ -1.15
NF1-221ENST00000581790 JARID2Q92833 1246 aaPredicted RBP7.84□□□□□ -1.15
NF1-221ENST00000581790 SMARCC1Q92922 1105 aaPredicted RBP7.84□□□□□ -1.15
NF1-221ENST00000581790 EAF2Q96CJ1 260 aaPredicted RBP7.84□□□□□ -1.15
NF1-221ENST00000581790 ARXQ96QS3 562 aa7.84□□□□□ -1.15
NF1-221ENST00000581790 ZSCAN10Q96SZ4 725 aaPredicted RBP7.84□□□□□ -1.15
NF1-221ENST00000581790 CCDC8Q9H0W5 538 aaPredicted RBP7.84□□□□□ -1.15
NF1-221ENST00000581790 ANTXR1Q9H6X2 564 aa7.84□□□□□ -1.15
NF1-221ENST00000581790 DIAPH3Q9NSV4 1193 aa7.84□□□□□ -1.15
NF1-221ENST00000581790 CDHR2Q9BYE9 1310 aa7.83□□□□□ -1.16
NF1-221ENST00000581790 ZBBXA8MT70 800 aa7.83□□□□□ -1.16
NF1-221ENST00000581790 SGSM2O43147 1006 aa7.83□□□□□ -1.16
NF1-221ENST00000581790 GNRH1P01148 92 aa7.83□□□□□ -1.16
NF1-221ENST00000581790 PCCAP05165 728 aaPredicted RBP7.83□□□□□ -1.16
NF1-221ENST00000581790 IL15P40933 162 aaPredicted RBP7.83□□□□□ -1.16
NF1-221ENST00000581790 MCM2P49736 904 aa7.83□□□□□ -1.16
NF1-221ENST00000581790 SKIV2LQ15477 1246 aaKnown RBP7.83□□□□□ -1.16
NF1-221ENST00000581790 VPS72Q15906 364 aa7.83□□□□□ -1.16
NF1-221ENST00000581790 C4orf17Q53FE4 359 aa7.83□□□□□ -1.16
NF1-221ENST00000581790 TNNI3KQ59H18 835 aa7.83□□□□□ -1.16
NF1-221ENST00000581790 GNASQ5JWF2 1037 aa7.83□□□□□ -1.16
NF1-221ENST00000581790 PROCA1Q8NCQ7 364 aaPredicted RBP7.83□□□□□ -1.16
NF1-221ENST00000581790 PLA2G12BQ9BX93 195 aa7.83□□□□□ -1.16
NF1-221ENST00000581790 PLVAPQ9BX97 442 aa7.83□□□□□ -1.16
NF1-221ENST00000581790 GOLGA2P5Q9HBQ8 144 aa7.83□□□□□ -1.16
NF1-221ENST00000581790 ZBTB1Q9Y2K1 713 aa7.83□□□□□ -1.16
NF1-221ENST00000581790 PCDHB11Q9Y5F2 797 aa7.83□□□□□ -1.16
NF1-221ENST00000581790 FPGT-TNNI3KV9GXZ4 949 aa7.83□□□□□ -1.16
NF1-221ENST00000581790 RFX7Q2KHR2 1363 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms