RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 SAP30BPQ9UHR5 308 aaKnown RBP17.38■□□□□ 0.37
CDK5RAP3-218ENST00000580391 FLT1P17948 1338 aa17.38■□□□□ 0.37
CDK5RAP3-218ENST00000580391 ERICH2A1L162 156 aa17.37■□□□□ 0.37
CDK5RAP3-218ENST00000580391 GOLGA8AA7E2F4 631 aa17.37■□□□□ 0.37
CDK5RAP3-218ENST00000580391 ORC4O43929 436 aa17.37■□□□□ 0.37
CDK5RAP3-218ENST00000580391 CDC27P30260 824 aa17.37■□□□□ 0.37
CDK5RAP3-218ENST00000580391 SCNN1DP51172 638 aa17.37■□□□□ 0.37
CDK5RAP3-218ENST00000580391 KIAA2012Q0VF49 1180 aa17.37■□□□□ 0.37
CDK5RAP3-218ENST00000580391 COL4A5P29400 1685 aa17.37■□□□□ 0.37
CDK5RAP3-218ENST00000580391 NID2Q14112 1375 aa17.37■□□□□ 0.37
CDK5RAP3-218ENST00000580391 CPLX1O14810 134 aa17.37■□□□□ 0.37
CDK5RAP3-218ENST00000580391 DHX16O60231 1041 aaKnown RBP17.37■□□□□ 0.37
CDK5RAP3-218ENST00000580391 PLCG2P16885 1265 aa17.37■□□□□ 0.37
CDK5RAP3-218ENST00000580391 ADD1P35611 737 aaKnown RBP17.37■□□□□ 0.37
CDK5RAP3-218ENST00000580391 SEC23AQ15436 765 aa17.37■□□□□ 0.37
CDK5RAP3-218ENST00000580391 CCDC93Q567U6 631 aa17.37■□□□□ 0.37
CDK5RAP3-218ENST00000580391 CHMP4CQ96CF2 233 aa17.37■□□□□ 0.37
CDK5RAP3-218ENST00000580391 DYNLL2Q96FJ2 89 aa17.37■□□□□ 0.37
CDK5RAP3-218ENST00000580391 GZF1Q9H116 711 aaPredicted RBP17.37■□□□□ 0.37
CDK5RAP3-218ENST00000580391 CNPY2Q9Y2B0 182 aa17.37■□□□□ 0.37
CDK5RAP3-218ENST00000580391 SLC12A7Q9Y666 1083 aa17.37■□□□□ 0.37
CDK5RAP3-218ENST00000580391 PPIP5K2O43314 1243 aa17.36■□□□□ 0.37
CDK5RAP3-218ENST00000580391 SLC3A2P08195 630 aaKnown RBP17.36■□□□□ 0.37
CDK5RAP3-218ENST00000580391 PDIA4P13667 645 aaKnown RBP17.36■□□□□ 0.37
CDK5RAP3-218ENST00000580391 R3HDM1Q15032 1099 aaKnown RBP17.36■□□□□ 0.37
CDK5RAP3-218ENST00000580391 ENAHQ8N8S7 591 aaPredicted RBP17.36■□□□□ 0.37
CDK5RAP3-218ENST00000580391 MTFR1LQ9H019 292 aa17.36■□□□□ 0.37
CDK5RAP3-218ENST00000580391 FER1L6Q2WGJ9 1857 aa17.35■□□□□ 0.37
CDK5RAP3-218ENST00000580391 H3BQV1 296 aa17.35■□□□□ 0.37
CDK5RAP3-218ENST00000580391 DNM1Q05193 864 aaKnown RBP17.35■□□□□ 0.37
CDK5RAP3-218ENST00000580391 GSE1Q14687 1217 aa17.35■□□□□ 0.37
CDK5RAP3-218ENST00000580391 SKOR2Q2VWA4 1001 aaPredicted RBP17.35■□□□□ 0.37
CDK5RAP3-218ENST00000580391 FAM47AQ5JRC9 791 aa17.35■□□□□ 0.37
CDK5RAP3-218ENST00000580391 DACT2Q5SW24 774 aa17.35■□□□□ 0.37
CDK5RAP3-218ENST00000580391 IFFO2Q5TF58 517 aa17.35■□□□□ 0.37
CDK5RAP3-218ENST00000580391 SUPT20HQ8NEM7 779 aa17.35■□□□□ 0.37
CDK5RAP3-218ENST00000580391 ZSCAN10Q96SZ4 725 aaPredicted RBP17.35■□□□□ 0.37
CDK5RAP3-218ENST00000580391 FAM217BQ9NTX9 383 aaPredicted RBP17.35■□□□□ 0.37
CDK5RAP3-218ENST00000580391 KIF3AQ9Y496 699 aa17.35■□□□□ 0.37
CDK5RAP3-218ENST00000580391 ATP6V1DQ9Y5K8 247 aa17.35■□□□□ 0.37
CDK5RAP3-218ENST00000580391 DDX49Q9Y6V7 483 aaKnown RBP17.35■□□□□ 0.37
CDK5RAP3-218ENST00000580391 PLCD1P51178 756 aa17.35■□□□□ 0.37
CDK5RAP3-218ENST00000580391 PDE4BQ07343 736 aa17.35■□□□□ 0.37
CDK5RAP3-218ENST00000580391 STRIP1Q5VSL9 837 aa17.35■□□□□ 0.37
CDK5RAP3-218ENST00000580391 FAM173BQ6P4H8 233 aa17.35■□□□□ 0.37
CDK5RAP3-218ENST00000580391 ORC3Q9UBD5 711 aaPredicted RBP17.35■□□□□ 0.37
CDK5RAP3-218ENST00000580391 POLR3DP05423 398 aaPredicted RBP17.34■□□□□ 0.37
CDK5RAP3-218ENST00000580391 RESTQ13127 1097 aa17.34■□□□□ 0.37
CDK5RAP3-218ENST00000580391 IQCA1Q86XH1 822 aa17.34■□□□□ 0.37
CDK5RAP3-218ENST00000580391 KIAA0825Q8IV33 1275 aa17.34■□□□□ 0.37
CDK5RAP3-218ENST00000580391 AMOTL1Q8IY63 956 aa17.34■□□□□ 0.37
CDK5RAP3-218ENST00000580391 ZNF654Q8IZM8 581 aa17.34■□□□□ 0.37
CDK5RAP3-218ENST00000580391 SLC44A5Q8NCS7 719 aa17.34■□□□□ 0.37
CDK5RAP3-218ENST00000580391 YDJCA8MPS7 323 aa17.33■□□□□ 0.37
CDK5RAP3-218ENST00000580391 FIBPO43427 364 aa17.33■□□□□ 0.37
CDK5RAP3-218ENST00000580391 NMT2O60551 498 aa17.33■□□□□ 0.37
CDK5RAP3-218ENST00000580391 NCLP19338 710 aaKnown RBP17.33■□□□□ 0.37
CDK5RAP3-218ENST00000580391 POLD1P28340 1107 aa17.33■□□□□ 0.37
CDK5RAP3-218ENST00000580391 GUCY1B3Q02153 619 aa17.33■□□□□ 0.37
CDK5RAP3-218ENST00000580391 NTRK3Q16288 839 aa17.33■□□□□ 0.37
CDK5RAP3-218ENST00000580391 KLHL40Q2TBA0 621 aa17.33■□□□□ 0.37
CDK5RAP3-218ENST00000580391 USP17L3A6NCW0 530 aa17.33■□□□□ 0.36
CDK5RAP3-218ENST00000580391 USP17L4A6NCW7 530 aa17.33■□□□□ 0.36
CDK5RAP3-218ENST00000580391 SYNE3Q6ZMZ3 975 aa17.33■□□□□ 0.36
CDK5RAP3-218ENST00000580391 USP17L1Q7RTZ2 530 aa17.33■□□□□ 0.36
CDK5RAP3-218ENST00000580391 GPT2Q8TD30 523 aa17.33■□□□□ 0.36
CDK5RAP3-218ENST00000580391 PHKBQ93100 1093 aa17.33■□□□□ 0.36
CDK5RAP3-218ENST00000580391 TEKT1Q969V4 418 aa17.33■□□□□ 0.36
CDK5RAP3-218ENST00000580391 SIPA1L1O43166 1804 aa17.32■□□□□ 0.36
CDK5RAP3-218ENST00000580391 TSPY2A6NKD2 308 aa17.32■□□□□ 0.36
CDK5RAP3-218ENST00000580391 CRKP46108 304 aa17.32■□□□□ 0.36
CDK5RAP3-218ENST00000580391 FKBP1AP62942 108 aaKnown RBP17.32■□□□□ 0.36
CDK5RAP3-218ENST00000580391 PICALMQ13492 652 aa17.32■□□□□ 0.36
CDK5RAP3-218ENST00000580391 RTN1Q16799 776 aa17.32■□□□□ 0.36
CDK5RAP3-218ENST00000580391 IFIT1BQ5T764 474 aaKnown RBP17.32■□□□□ 0.36
CDK5RAP3-218ENST00000580391 HHIPL2Q6UWX4 724 aa17.32■□□□□ 0.36
CDK5RAP3-218ENST00000580391 USP48Q86UV5 1035 aa17.32■□□□□ 0.36
CDK5RAP3-218ENST00000580391 RTKN2Q8IZC4 609 aa17.32■□□□□ 0.36
CDK5RAP3-218ENST00000580391 TMTC2Q8N394 836 aa17.32■□□□□ 0.36
CDK5RAP3-218ENST00000580391 TMEM87AQ8NBN3 555 aa17.32■□□□□ 0.36
CDK5RAP3-218ENST00000580391 PSMD1Q99460 953 aa17.32■□□□□ 0.36
CDK5RAP3-218ENST00000580391 DDX4Q9NQI0 724 aaKnown RBP17.32■□□□□ 0.36
CDK5RAP3-218ENST00000580391 PCDHAC2Q9Y5I4 1007 aa17.32■□□□□ 0.36
CDK5RAP3-218ENST00000580391 OTUD7BQ6GQQ9 843 aa17.31■□□□□ 0.36
CDK5RAP3-218ENST00000580391 NUP133Q8WUM0 1156 aa17.31■□□□□ 0.36
CDK5RAP3-218ENST00000580391 ZNF277Q9NRM2 450 aaPredicted RBP17.31■□□□□ 0.36
CDK5RAP3-218ENST00000580391 GADD45BO75293 160 aaPredicted RBP17.31■□□□□ 0.36
CDK5RAP3-218ENST00000580391 WDHD1O75717 1129 aaPredicted RBP17.31■□□□□ 0.36
CDK5RAP3-218ENST00000580391 CDKL5O76039 1030 aa17.31■□□□□ 0.36
CDK5RAP3-218ENST00000580391 DEKP35659 375 aaKnown RBP17.31■□□□□ 0.36
CDK5RAP3-218ENST00000580391 GRIPAP1Q4V328 841 aa17.31■□□□□ 0.36
CDK5RAP3-218ENST00000580391 APOBEC3HQ6NTF7 200 aaKnown RBP17.31■□□□□ 0.36
CDK5RAP3-218ENST00000580391 CPLX2Q6PUV4 134 aaKnown RBP17.31■□□□□ 0.36
CDK5RAP3-218ENST00000580391 UPF1Q92900 1129 aaKnown RBP eCLIP17.31■□□□□ 0.36
CDK5RAP3-218ENST00000580391 AIFM3Q96NN9 605 aa17.31■□□□□ 0.36
CDK5RAP3-218ENST00000580391 GJB4Q9NTQ9 266 aa17.31■□□□□ 0.36
CDK5RAP3-218ENST00000580391 RCAN1P53805 252 aa17.3■□□□□ 0.36
CDK5RAP3-218ENST00000580391 TGFB2P61812 414 aa17.3■□□□□ 0.36
CDK5RAP3-218ENST00000580391 CDC42EP5Q6NZY7 148 aa17.3■□□□□ 0.36
CDK5RAP3-218ENST00000580391 C8orf76Q96K31 380 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms