RNA–Protein interactions for RNA: ENST00000579944.1

LINC00271-206, long intergenic non-protein coding RNA 271, humanhuman

TSL 2

Gene LINC00271, Length 464 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-206ENST00000579944 NSUN3Q9H649 340 aaKnown RBP6.73□□□□□ -1.33
LINC00271-206ENST00000579944 GTF2IRD1Q9UHL9 959 aa6.73□□□□□ -1.33
LINC00271-206ENST00000579944 NEFMP07197 916 aa6.72□□□□□ -1.33
LINC00271-206ENST00000579944 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.72□□□□□ -1.33
LINC00271-206ENST00000579944 DIRC2Q96SL1 478 aa6.72□□□□□ -1.33
LINC00271-206ENST00000579944 KRT82Q9NSB4 513 aa6.72□□□□□ -1.33
LINC00271-206ENST00000579944 CCDC87Q9NVE4 849 aa6.72□□□□□ -1.33
LINC00271-206ENST00000579944 JAG2Q9Y219 1238 aa6.72□□□□□ -1.33
LINC00271-206ENST00000579944 DCAF1Q9Y4B6 1507 aa6.71□□□□□ -1.33
LINC00271-206ENST00000579944 ABL1P00519 1130 aa6.71□□□□□ -1.34
LINC00271-206ENST00000579944 TMEM253P0C7T8 217 aa6.71□□□□□ -1.34
LINC00271-206ENST00000579944 PTPN12Q05209 780 aaKnown RBP6.71□□□□□ -1.34
LINC00271-206ENST00000579944 KCNA10Q16322 511 aa6.71□□□□□ -1.34
LINC00271-206ENST00000579944 CCDC27Q2M243 656 aa6.71□□□□□ -1.34
LINC00271-206ENST00000579944 CIAPIN1Q6FI81 312 aa6.71□□□□□ -1.34
LINC00271-206ENST00000579944 ISL2Q96A47 359 aa6.71□□□□□ -1.34
LINC00271-206ENST00000579944 IGF2BP3O00425 579 aaKnown RBP eCLIP6.7□□□□□ -1.34
LINC00271-206ENST00000579944 GSTP1P09211 210 aaKnown RBP6.7□□□□□ -1.34
LINC00271-206ENST00000579944 ZNF157P51786 506 aaPredicted RBP6.7□□□□□ -1.34
LINC00271-206ENST00000579944 FAM214BQ7L5A3 538 aa6.7□□□□□ -1.34
LINC00271-206ENST00000579944 CD320Q9NPF0 282 aa6.7□□□□□ -1.34
LINC00271-206ENST00000579944 NCAPD3P42695 1498 aa6.7□□□□□ -1.34
LINC00271-206ENST00000579944 PITPNM2Q9BZ72 1349 aa6.7□□□□□ -1.34
LINC00271-206ENST00000579944 ARHGEF11O15085 1522 aa6.7□□□□□ -1.34
LINC00271-206ENST00000579944 CLCN7P51798 805 aa6.69□□□□□ -1.34
LINC00271-206ENST00000579944 NKPD1Q17RQ9 610 aa6.69□□□□□ -1.34
LINC00271-206ENST00000579944 RPS26P11Q5JNZ5 115 aaPredicted RBP6.69□□□□□ -1.34
LINC00271-206ENST00000579944 USPL1Q5W0Q7 1092 aa6.69□□□□□ -1.34
LINC00271-206ENST00000579944 ATG14Q6ZNE5 492 aa6.69□□□□□ -1.34
LINC00271-206ENST00000579944 CARS2Q9HA77 564 aaKnown RBP6.69□□□□□ -1.34
LINC00271-206ENST00000579944 ABCB6Q9NP58 842 aa6.69□□□□□ -1.34
LINC00271-206ENST00000579944 TCAF2A6NFQ2 919 aa6.68□□□□□ -1.34
LINC00271-206ENST00000579944 SOWAHDA6NJG2 315 aa6.68□□□□□ -1.34
LINC00271-206ENST00000579944 GNAT3A8MTJ3 354 aa6.68□□□□□ -1.34
LINC00271-206ENST00000579944 ZNF211Q13398 564 aaPredicted RBP6.68□□□□□ -1.34
LINC00271-206ENST00000579944 NPHS2Q9NP85 383 aa6.68□□□□□ -1.34
LINC00271-206ENST00000579944 C19orf73Q9NVV2 129 aa6.68□□□□□ -1.34
LINC00271-206ENST00000579944 BIN2Q9UBW5 565 aaPredicted RBP6.68□□□□□ -1.34
LINC00271-206ENST00000579944 LAMC3Q9Y6N6 1575 aa6.68□□□□□ -1.34
LINC00271-206ENST00000579944 H3BRB1 525 aa6.67□□□□□ -1.34
LINC00271-206ENST00000579944 HOXA5P20719 270 aa6.67□□□□□ -1.34
LINC00271-206ENST00000579944 GDNFP39905 211 aa6.67□□□□□ -1.34
LINC00271-206ENST00000579944 FAAP100Q0VG06 881 aa6.67□□□□□ -1.34
LINC00271-206ENST00000579944 KRTAP5-3Q6L8H2 238 aa6.67□□□□□ -1.34
LINC00271-206ENST00000579944 RNF214Q8ND24 703 aa6.67□□□□□ -1.34
LINC00271-206ENST00000579944 KCNB2Q92953 911 aa6.67□□□□□ -1.34
LINC00271-206ENST00000579944 TUT1Q9H6E5 874 aaKnown RBP6.67□□□□□ -1.34
LINC00271-206ENST00000579944 DCP1AQ9NPI6 582 aaPredicted RBP6.67□□□□□ -1.34
LINC00271-206ENST00000579944 ANO2Q9NQ90 1003 aa6.67□□□□□ -1.34
LINC00271-206ENST00000579944 WDR62O43379 1518 aa6.66□□□□□ -1.34
LINC00271-206ENST00000579944 NUAK1O60285 661 aa6.66□□□□□ -1.34
LINC00271-206ENST00000579944 NEFLP07196 543 aa6.66□□□□□ -1.34
LINC00271-206ENST00000579944 MED14OSP0DP75 135 aa6.66□□□□□ -1.34
LINC00271-206ENST00000579944 SF3B2Q13435 895 aaKnown RBP6.66□□□□□ -1.34
LINC00271-206ENST00000579944 PRPF40BQ6NWY9 871 aaKnown RBP6.66□□□□□ -1.34
LINC00271-206ENST00000579944 GLYCTKQ8IVS8 523 aa6.66□□□□□ -1.34
LINC00271-206ENST00000579944 C20orf173Q96LM9 149 aa6.66□□□□□ -1.34
LINC00271-206ENST00000579944 EPB41L4BQ9H329 900 aa6.66□□□□□ -1.34
LINC00271-206ENST00000579944 KCNK12Q9HB15 430 aa6.66□□□□□ -1.34
LINC00271-206ENST00000579944 PRDM10Q9NQV6 1147 aa6.66□□□□□ -1.34
LINC00271-206ENST00000579944 EGFL7Q9UHF1 273 aa6.66□□□□□ -1.34
LINC00271-206ENST00000579944 HMGXB3Q12766 1538 aa6.66□□□□□ -1.34
LINC00271-206ENST00000579944 ERVK-24P63145 666 aa6.65□□□□□ -1.34
LINC00271-206ENST00000579944 FKBP4Q02790 459 aaKnown RBP eCLIP6.65□□□□□ -1.34
LINC00271-206ENST00000579944 NPM2Q86SE8 214 aaKnown RBP6.65□□□□□ -1.34
LINC00271-206ENST00000579944 RELTQ969Z4 430 aa6.65□□□□□ -1.34
LINC00271-206ENST00000579944 ZCCHC6Q5VYS8 1495 aaKnown RBP6.65□□□□□ -1.35
LINC00271-206ENST00000579944 TMEM238LA0A1B0GVL6 79 aa6.64□□□□□ -1.35
LINC00271-206ENST00000579944 ICMTO60725 284 aa6.64□□□□□ -1.35
LINC00271-206ENST00000579944 GLDCP23378 1020 aa6.64□□□□□ -1.35
LINC00271-206ENST00000579944 ZC3H12AQ5D1E8 599 aaKnown RBP6.64□□□□□ -1.35
LINC00271-206ENST00000579944 PDZD3Q86UT5 571 aa6.64□□□□□ -1.35
LINC00271-206ENST00000579944 RGS22Q8NE09 1264 aa6.64□□□□□ -1.35
LINC00271-206ENST00000579944 FOXQ1Q9C009 403 aa6.64□□□□□ -1.35
LINC00271-206ENST00000579944 SMG5Q9UPR3 1016 aaKnown RBP6.64□□□□□ -1.35
LINC00271-206ENST00000579944 ETV2O00321 342 aaPredicted RBP6.63□□□□□ -1.35
LINC00271-206ENST00000579944 CPNE3O75131 537 aaKnown RBP6.63□□□□□ -1.35
LINC00271-206ENST00000579944 LINC00310P59036 64 aa6.63□□□□□ -1.35
LINC00271-206ENST00000579944 PPP2R3AQ06190 1150 aa6.63□□□□□ -1.35
LINC00271-206ENST00000579944 NPAS4Q8IUM7 802 aa6.63□□□□□ -1.35
LINC00271-206ENST00000579944 ATP13A1Q9HD20 1204 aa6.63□□□□□ -1.35
LINC00271-206ENST00000579944 GPN3Q9UHW5 284 aaPredicted RBP6.63□□□□□ -1.35
LINC00271-206ENST00000579944 RANGAP1P46060 587 aaPredicted RBP6.62□□□□□ -1.35
LINC00271-206ENST00000579944 CCDC120Q96HB5 630 aa6.62□□□□□ -1.35
LINC00271-206ENST00000579944 HSPA12BQ96MM6 686 aa6.62□□□□□ -1.35
LINC00271-206ENST00000579944 PRDM5Q9NQX1 630 aaPredicted RBP6.62□□□□□ -1.35
LINC00271-206ENST00000579944 SEMA3GQ9NS98 782 aa6.62□□□□□ -1.35
LINC00271-206ENST00000579944 GADD45BO75293 160 aaPredicted RBP6.61□□□□□ -1.35
LINC00271-206ENST00000579944 ORC1Q13415 861 aa6.61□□□□□ -1.35
LINC00271-206ENST00000579944 SLC26A8Q96RN1 970 aa6.61□□□□□ -1.35
LINC00271-206ENST00000579944 PARD6AQ9NPB6 346 aa6.61□□□□□ -1.35
LINC00271-206ENST00000579944 TMEM39AQ9NV64 488 aa6.61□□□□□ -1.35
LINC00271-206ENST00000579944 TRAK1Q9UPV9 953 aa6.61□□□□□ -1.35
LINC00271-206ENST00000579944 MAPK8IP1Q9UQF2 711 aa6.61□□□□□ -1.35
LINC00271-206ENST00000579944 ARAP1Q96P48 1450 aa6.6□□□□□ -1.35
LINC00271-206ENST00000579944 EOMESO95936 686 aa6.6□□□□□ -1.35
LINC00271-206ENST00000579944 MAP1SQ66K74 1059 aaPredicted RBP6.6□□□□□ -1.35
LINC00271-206ENST00000579944 ABHD4Q8TB40 342 aa6.6□□□□□ -1.35
LINC00271-206ENST00000579944 KCNN1Q92952 543 aa6.6□□□□□ -1.35
LINC00271-206ENST00000579944 CSRNP1Q96S65 589 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms