RNA–Protein interactions for RNA: ENST00000579944.1

LINC00271-206, long intergenic non-protein coding RNA 271, humanhuman

TSL 2

Gene LINC00271, Length 464 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-206ENST00000579944 AEBP2Q6ZN18 517 aaPredicted RBP27.55■■■□□ 2
LINC00271-206ENST00000579944 CHIC1Q5VXU3 224 aa25.85■■□□□ 1.73
LINC00271-206ENST00000579944 SENP3Q9H4L4 574 aaPredicted RBP23.59■■□□□ 1.37
LINC00271-206ENST00000579944 PHF23Q9BUL5 403 aaPredicted RBP23.22■■□□□ 1.31
LINC00271-206ENST00000579944 FOXD1Q16676 465 aa22.01■■□□□ 1.11
LINC00271-206ENST00000579944 POTEDQ86YR6 584 aa20.8■□□□□ 0.92
LINC00271-206ENST00000579944 MSH5O43196 834 aa20.75■□□□□ 0.91
LINC00271-206ENST00000579944 PLPPR3Q6T4P5 718 aa20.53■□□□□ 0.88
LINC00271-206ENST00000579944 PIAS4Q8N2W9 510 aaPredicted RBP20.52■□□□□ 0.88
LINC00271-206ENST00000579944 PPP6R1Q9UPN7 881 aa20.3■□□□□ 0.84
LINC00271-206ENST00000579944 ADRA2BP18089 450 aa20.24■□□□□ 0.83
LINC00271-206ENST00000579944 MAPK8IP2Q13387 824 aaPredicted RBP18.68■□□□□ 0.58
LINC00271-206ENST00000579944 DMRT2Q9Y5R5 561 aa18.64■□□□□ 0.57
LINC00271-206ENST00000579944 SCAF1Q9H7N4 1312 aaKnown RBP18.55■□□□□ 0.56
LINC00271-206ENST00000579944 CACNB1Q02641 598 aaPredicted RBP18.02■□□□□ 0.48
LINC00271-206ENST00000579944 DCAF8L1A6NGE4 600 aa17.94■□□□□ 0.46
LINC00271-206ENST00000579944 PPP4R3CPQ6ZMV5 832 aa17.94■□□□□ 0.46
LINC00271-206ENST00000579944 HOXD11P31277 338 aaPredicted RBP17.82■□□□□ 0.44
LINC00271-206ENST00000579944 CNKSR2Q8WXI2 1034 aa17.69■□□□□ 0.42
LINC00271-206ENST00000579944 RNF39Q9H2S5 420 aa17.65■□□□□ 0.42
LINC00271-206ENST00000579944 RNF216Q9NWF9 866 aaPredicted RBP17.61■□□□□ 0.41
LINC00271-206ENST00000579944 C1QBPQ07021 282 aaKnown RBP17.38■□□□□ 0.37
LINC00271-206ENST00000579944 DNAJC5BQ9UF47 199 aa17.26■□□□□ 0.35
LINC00271-206ENST00000579944 NCBP3Q53F19 620 aaKnown RBP17.17■□□□□ 0.34
LINC00271-206ENST00000579944 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17■□□□□ 0.31
LINC00271-206ENST00000579944 NPM3O75607 178 aaKnown RBP16.9■□□□□ 0.3
LINC00271-206ENST00000579944 U3KPZ7 1027 aaPredicted RBP16.6■□□□□ 0.25
LINC00271-206ENST00000579944 CAPN15O75808 1086 aa16.48■□□□□ 0.23
LINC00271-206ENST00000579944 SPINK5Q9NQ38 1064 aaPredicted RBP16.45■□□□□ 0.22
LINC00271-206ENST00000579944 DSG3P32926 999 aa16.42■□□□□ 0.22
LINC00271-206ENST00000579944 KCNA4P22459 653 aa16.27■□□□□ 0.2
LINC00271-206ENST00000579944 POTEHQ6S545 545 aa16.25■□□□□ 0.19
LINC00271-206ENST00000579944 SLC4A2P04920 1241 aa16.21■□□□□ 0.19
LINC00271-206ENST00000579944 APLP2Q06481 763 aa16.14■□□□□ 0.17
LINC00271-206ENST00000579944 TRHP20396 242 aaPredicted RBP16.13■□□□□ 0.17
LINC00271-206ENST00000579944 ZNF219Q9P2Y4 722 aaPredicted RBP16.09■□□□□ 0.17
LINC00271-206ENST00000579944 ABCB7O75027 752 aa16.05■□□□□ 0.16
LINC00271-206ENST00000579944 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.03■□□□□ 0.16
LINC00271-206ENST00000579944 HNRNPUL2Q1KMD3 747 aaKnown RBP16.03■□□□□ 0.16
LINC00271-206ENST00000579944 SAMD1Q6SPF0 538 aaPredicted RBP15.91■□□□□ 0.14
LINC00271-206ENST00000579944 RBM42Q9BTD8 480 aaKnown RBP15.71■□□□□ 0.11
LINC00271-206ENST00000579944 MYCNP04198 464 aaPredicted RBP15.66■□□□□ 0.1
LINC00271-206ENST00000579944 POLA2Q14181 598 aa15.6■□□□□ 0.09
LINC00271-206ENST00000579944 CHRDL2Q6WN34 429 aa15.48■□□□□ 0.07
LINC00271-206ENST00000579944 SLC4A1APQ9BWU0 796 aaKnown RBP15.31■□□□□ 0.04
LINC00271-206ENST00000579944 FOXD4L1Q9NU39 408 aa15.3■□□□□ 0.04
LINC00271-206ENST00000579944 ATF5Q9Y2D1 282 aaPredicted RBP15.3■□□□□ 0.04
LINC00271-206ENST00000579944 ZBTB12Q9Y330 459 aaPredicted RBP15.27■□□□□ 0.04
LINC00271-206ENST00000579944 AKT1S1Q96B36 256 aa15.26■□□□□ 0.03
LINC00271-206ENST00000579944 OSCARQ8IYS5 282 aa15.12■□□□□ 0.01
LINC00271-206ENST00000579944 REM2Q8IYK8 340 aaPredicted RBP15.11■□□□□ 0.01
LINC00271-206ENST00000579944 SP7Q8TDD2 431 aaPredicted RBP15.08■□□□□ 0
LINC00271-206ENST00000579944 PIP4P2Q8N4L2 257 aa15.04■□□□□ -0
LINC00271-206ENST00000579944 PITPNM1O00562 1244 aa14.97□□□□□ -0.01
LINC00271-206ENST00000579944 ZBTB22O15209 634 aa14.93□□□□□ -0.02
LINC00271-206ENST00000579944 HAX1O00165 279 aa14.88□□□□□ -0.03
LINC00271-206ENST00000579944 FXR2P51116 673 aaKnown RBP eCLIP14.88□□□□□ -0.03
LINC00271-206ENST00000579944 ATXN8OSP0DMR3 200 aa14.86□□□□□ -0.03
LINC00271-206ENST00000579944 SPDYE2BA6NHP3 402 aa14.76□□□□□ -0.05
LINC00271-206ENST00000579944 SPDYE6P0CI01 402 aa14.76□□□□□ -0.05
LINC00271-206ENST00000579944 FBLN2P98095 1184 aa14.76□□□□□ -0.05
LINC00271-206ENST00000579944 SPDYE2Q495Y8 402 aa14.76□□□□□ -0.05
LINC00271-206ENST00000579944 EVX2Q03828 476 aa14.62□□□□□ -0.07
LINC00271-206ENST00000579944 CLEC11AQ9Y240 323 aa14.61□□□□□ -0.07
LINC00271-206ENST00000579944 SPDYE1Q8NFV5 336 aaPredicted RBP14.59□□□□□ -0.07
LINC00271-206ENST00000579944 PRKAR2AP13861 404 aaKnown RBP14.58□□□□□ -0.08
LINC00271-206ENST00000579944 MKRN4PQ13434 485 aaPredicted RBP14.56□□□□□ -0.08
LINC00271-206ENST00000579944 ZNF692Q9BU19 519 aaPredicted RBP14.54□□□□□ -0.08
LINC00271-206ENST00000579944 SSUH2Q9Y2M2 353 aa14.51□□□□□ -0.09
LINC00271-206ENST00000579944 C19orf67A6NJJ6 358 aa14.42□□□□□ -0.1
LINC00271-206ENST00000579944 CHADLQ6NUI6 762 aa14.35□□□□□ -0.11
LINC00271-206ENST00000579944 PRR29P0C7W0 189 aa14.31□□□□□ -0.12
LINC00271-206ENST00000579944 PABPN1Q86U42 306 aaKnown RBP eCLIP14.31□□□□□ -0.12
LINC00271-206ENST00000579944 GABBR2O75899 941 aa14.3□□□□□ -0.12
LINC00271-206ENST00000579944 LHX8Q68G74 356 aa14.14□□□□□ -0.15
LINC00271-206ENST00000579944 CD44P16070 742 aaKnown RBP14.1□□□□□ -0.15
LINC00271-206ENST00000579944 FARP1Q9Y4F1 1045 aaPredicted RBP14.08□□□□□ -0.16
LINC00271-206ENST00000579944 POTEIP0CG38 1075 aa13.97□□□□□ -0.17
LINC00271-206ENST00000579944 CLCN6P51797 869 aa13.97□□□□□ -0.17
LINC00271-206ENST00000579944 CSRNP3Q8WYN3 585 aa13.95□□□□□ -0.18
LINC00271-206ENST00000579944 DCBLD2Q96PD2 775 aa13.87□□□□□ -0.19
LINC00271-206ENST00000579944 ZNF579Q8NAF0 562 aaKnown RBP13.85□□□□□ -0.19
LINC00271-206ENST00000579944 CREBZFQ9NS37 354 aa13.85□□□□□ -0.19
LINC00271-206ENST00000579944 ZRANB1Q9UGI0 708 aa13.85□□□□□ -0.19
LINC00271-206ENST00000579944 STAG3Q9UJ98 1225 aa13.85□□□□□ -0.19
LINC00271-206ENST00000579944 SPDYE4A6NLX3 237 aa13.74□□□□□ -0.21
LINC00271-206ENST00000579944 GALR2O43603 387 aaPredicted RBP13.71□□□□□ -0.21
LINC00271-206ENST00000579944 PAK3O75914 559 aaPredicted RBP13.69□□□□□ -0.22
LINC00271-206ENST00000579944 EHMT2Q96KQ7 1210 aa13.63□□□□□ -0.23
LINC00271-206ENST00000579944 PHF12Q96QT6 1004 aa13.62□□□□□ -0.23
LINC00271-206ENST00000579944 NPM1P06748 294 aaKnown RBP eCLIP13.61□□□□□ -0.23
LINC00271-206ENST00000579944 MNX1P50219 401 aaPredicted RBP13.55□□□□□ -0.24
LINC00271-206ENST00000579944 OTUD5Q96G74 571 aa13.53□□□□□ -0.24
LINC00271-206ENST00000579944 PLSCR2Q9NRY7 297 aa13.53□□□□□ -0.24
LINC00271-206ENST00000579944 POTEB2H3BUK9 544 aa13.51□□□□□ -0.25
LINC00271-206ENST00000579944 PELP1Q8IZL8 1130 aaKnown RBP13.46□□□□□ -0.25
LINC00271-206ENST00000579944 MS4A3Q96HJ5 214 aa13.43□□□□□ -0.26
LINC00271-206ENST00000579944 ASTLQ6HA08 431 aaPredicted RBP13.4□□□□□ -0.26
LINC00271-206ENST00000579944 METRNQ9UJH8 293 aa13.39□□□□□ -0.27
LINC00271-206ENST00000579944 ATMINO43313 823 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms