RNA–Protein interactions for RNA: ENST00000579483.1

MSI2-209, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best)

Gene MSI2, Length 5,141 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-209ENST00000579483 GSDMDP57764 484 aa11.53□□□□□ -0.56
MSI2-209ENST00000579483 PODNQ7Z5L7 613 aa11.53□□□□□ -0.56
MSI2-209ENST00000579483 FNBP1Q96RU3 617 aa11.53□□□□□ -0.56
MSI2-209ENST00000579483 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.53□□□□□ -0.56
MSI2-209ENST00000579483 USP31Q70CQ4 1352 aa11.53□□□□□ -0.56
MSI2-209ENST00000579483 KIF5CO60282 957 aa11.53□□□□□ -0.56
MSI2-209ENST00000579483 FLOT1O75955 427 aa11.53□□□□□ -0.56
MSI2-209ENST00000579483 USP17L8P0C7I0 530 aa11.53□□□□□ -0.56
MSI2-209ENST00000579483 CCT6AP40227 531 aaKnown RBP11.53□□□□□ -0.56
MSI2-209ENST00000579483 PAFAH1B1P43034 410 aa11.53□□□□□ -0.56
MSI2-209ENST00000579483 USP44Q9H0E7 712 aa11.53□□□□□ -0.56
MSI2-209ENST00000579483 ALKQ9UM73 1620 aa11.53□□□□□ -0.56
MSI2-209ENST00000579483 PDE6AP16499 860 aa11.53□□□□□ -0.56
MSI2-209ENST00000579483 RC3H1Q5TC82 1133 aaKnown RBP11.53□□□□□ -0.56
MSI2-209ENST00000579483 KRT26Q7Z3Y9 468 aa11.53□□□□□ -0.56
MSI2-209ENST00000579483 N4BP3O15049 544 aa11.53□□□□□ -0.56
MSI2-209ENST00000579483 ARHGEF16Q5VV41 709 aa11.53□□□□□ -0.56
MSI2-209ENST00000579483 DDX12PQ92771 950 aa11.53□□□□□ -0.56
MSI2-209ENST00000579483 FAM212AQ96EL1 285 aa11.53□□□□□ -0.56
MSI2-209ENST00000579483 CPSF1Q10570 1443 aaKnown RBP11.53□□□□□ -0.56
MSI2-209ENST00000579483 RLBP1P12271 317 aa11.52□□□□□ -0.56
MSI2-209ENST00000579483 RPS6KB1P23443 525 aa11.52□□□□□ -0.56
MSI2-209ENST00000579483 GPATCH4Q5T3I0 446 aaKnown RBP11.52□□□□□ -0.56
MSI2-209ENST00000579483 NCAPG2Q86XI2 1143 aa11.52□□□□□ -0.56
MSI2-209ENST00000579483 CCDC112Q8NEF3 446 aa11.52□□□□□ -0.56
MSI2-209ENST00000579483 GLG1Q92896 1179 aa11.52□□□□□ -0.56
MSI2-209ENST00000579483 INTS4Q96HW7 963 aaKnown RBP11.52□□□□□ -0.56
MSI2-209ENST00000579483 MAP7D2Q96T17 732 aa11.52□□□□□ -0.56
MSI2-209ENST00000579483 AP5M1Q9H0R1 490 aa11.52□□□□□ -0.56
MSI2-209ENST00000579483 DBNDD1Q9H9R9 158 aa11.52□□□□□ -0.56
MSI2-209ENST00000579483 RNF181Q9P0P0 153 aa11.52□□□□□ -0.56
MSI2-209ENST00000579483 SRP68Q9UHB9 627 aaKnown RBP11.52□□□□□ -0.56
MSI2-209ENST00000579483 FRMD4BQ9Y2L6 1034 aa11.52□□□□□ -0.56
MSI2-209ENST00000579483 V9GY48 417 aaPredicted RBP11.52□□□□□ -0.56
MSI2-209ENST00000579483 GCOM1H8Y6P7 765 aaPredicted RBP11.52□□□□□ -0.57
MSI2-209ENST00000579483 FOSP01100 380 aaPredicted RBP11.52□□□□□ -0.57
MSI2-209ENST00000579483 POLR2MP0CAP2 368 aa11.52□□□□□ -0.57
MSI2-209ENST00000579483 PDE4DQ08499 809 aa11.52□□□□□ -0.57
MSI2-209ENST00000579483 RSPH3Q86UC2 560 aa11.52□□□□□ -0.57
MSI2-209ENST00000579483 IWS1Q96ST2 819 aa11.52□□□□□ -0.57
MSI2-209ENST00000579483 RNF17Q9BXT8 1623 aaKnown RBP11.52□□□□□ -0.57
MSI2-209ENST00000579483 H0YCG3 227 aa11.52□□□□□ -0.57
MSI2-209ENST00000579483 RAD17O75943 681 aa11.52□□□□□ -0.57
MSI2-209ENST00000579483 APOBEC3FQ8IUX4 373 aaKnown RBP11.52□□□□□ -0.57
MSI2-209ENST00000579483 BRIP1Q9BX63 1249 aa11.52□□□□□ -0.57
MSI2-209ENST00000579483 HOMER2Q9NSB8 354 aa11.52□□□□□ -0.57
MSI2-209ENST00000579483 COL15A1P39059 1388 aa11.52□□□□□ -0.57
MSI2-209ENST00000579483 ZBTB24O43167 697 aaPredicted RBP11.52□□□□□ -0.57
MSI2-209ENST00000579483 FAM47CQ5HY64 1035 aa11.52□□□□□ -0.57
MSI2-209ENST00000579483 WDR44Q5JSH3 913 aa11.52□□□□□ -0.57
MSI2-209ENST00000579483 GALNT17Q6IS24 598 aa11.52□□□□□ -0.57
MSI2-209ENST00000579483 CDC37L1Q7L3B6 337 aa11.52□□□□□ -0.57
MSI2-209ENST00000579483 FOXP4Q8IVH2 680 aaPredicted RBP11.52□□□□□ -0.57
MSI2-209ENST00000579483 REXO1Q8N1G1 1221 aaKnown RBP11.52□□□□□ -0.57
MSI2-209ENST00000579483 EHBP1Q8NDI1 1231 aa11.52□□□□□ -0.57
MSI2-209ENST00000579483 KANSL2Q9H9L4 492 aa11.52□□□□□ -0.57
MSI2-209ENST00000579483 CNPY2Q9Y2B0 182 aa11.52□□□□□ -0.57
MSI2-209ENST00000579483 CYP27B1O15528 508 aa11.51□□□□□ -0.57
MSI2-209ENST00000579483 C21orf2O43822 256 aa11.51□□□□□ -0.57
MSI2-209ENST00000579483 ALAS1P13196 640 aa11.51□□□□□ -0.57
MSI2-209ENST00000579483 HOXD10P28358 340 aa11.51□□□□□ -0.57
MSI2-209ENST00000579483 AFMP43652 599 aa11.51□□□□□ -0.57
MSI2-209ENST00000579483 SSX2IPQ9Y2D8 614 aa11.51□□□□□ -0.57
MSI2-209ENST00000579483 ABCC4O15439 1325 aa11.51□□□□□ -0.57
MSI2-209ENST00000579483 NEURL4Q96JN8 1562 aa11.51□□□□□ -0.57
MSI2-209ENST00000579483 GOLGA6L9A6NEM1 432 aa11.51□□□□□ -0.57
MSI2-209ENST00000579483 SLFN13Q68D06 897 aa11.51□□□□□ -0.57
MSI2-209ENST00000579483 CHST3Q7LGC8 479 aa11.51□□□□□ -0.57
MSI2-209ENST00000579483 PKD2L1Q9P0L9 805 aa11.51□□□□□ -0.57
MSI2-209ENST00000579483 ENOX2Q16206 610 aaKnown RBP11.51□□□□□ -0.57
MSI2-209ENST00000579483 JPH2Q9BR39 696 aaPredicted RBP11.51□□□□□ -0.57
MSI2-209ENST00000579483 PI4KBQ9UBF8 816 aa11.51□□□□□ -0.57
MSI2-209ENST00000579483 PNMA6EA0A0J9YXQ4 647 aa11.51□□□□□ -0.57
MSI2-209ENST00000579483 TMOD1P28289 359 aa11.51□□□□□ -0.57
MSI2-209ENST00000579483 SPOUT1Q5T280 376 aaKnown RBP11.51□□□□□ -0.57
MSI2-209ENST00000579483 FBXO11Q86XK2 927 aa11.51□□□□□ -0.57
MSI2-209ENST00000579483 HAUS7Q99871 368 aa11.51□□□□□ -0.57
MSI2-209ENST00000579483 RABGAP1Q9Y3P9 1069 aa11.51□□□□□ -0.57
MSI2-209ENST00000579483 CCDC169A6NNP5 214 aa11.5□□□□□ -0.57
MSI2-209ENST00000579483 SLC27A2O14975 620 aa11.5□□□□□ -0.57
MSI2-209ENST00000579483 ARID4AP29374 1257 aaPredicted RBP11.5□□□□□ -0.57
MSI2-209ENST00000579483 USH1GQ495M9 461 aa11.5□□□□□ -0.57
MSI2-209ENST00000579483 CTNNBL1Q8WYA6 563 aaPredicted RBP11.5□□□□□ -0.57
MSI2-209ENST00000579483 GOLGA1Q92805 767 aa11.5□□□□□ -0.57
MSI2-209ENST00000579483 DNM3Q9UQ16 869 aa11.5□□□□□ -0.57
MSI2-209ENST00000579483 MACROD2A1Z1Q3 448 aa11.5□□□□□ -0.57
MSI2-209ENST00000579483 IFNL3Q8IZI9 196 aa11.5□□□□□ -0.57
MSI2-209ENST00000579483 GBP3Q9H0R5 595 aa11.5□□□□□ -0.57
MSI2-209ENST00000579483 SGSM2O43147 1006 aa11.5□□□□□ -0.57
MSI2-209ENST00000579483 MCM3P25205 808 aa11.5□□□□□ -0.57
MSI2-209ENST00000579483 AK2P54819 239 aa11.5□□□□□ -0.57
MSI2-209ENST00000579483 TICAM2Q86XR7 235 aa11.5□□□□□ -0.57
MSI2-209ENST00000579483 DHX58Q96C10 678 aa11.5□□□□□ -0.57
MSI2-209ENST00000579483 NAA15Q9BXJ9 866 aaKnown RBP11.5□□□□□ -0.57
MSI2-209ENST00000579483 CLRN2A0PK11 232 aa11.5□□□□□ -0.57
MSI2-209ENST00000579483 FAM160B1Q5W0V3 765 aa11.5□□□□□ -0.57
MSI2-209ENST00000579483 EXOC8Q8IYI6 725 aa11.5□□□□□ -0.57
MSI2-209ENST00000579483 TBC1D2Q9BYX2 928 aa11.5□□□□□ -0.57
MSI2-209ENST00000579483 MMRN2Q9H8L6 949 aa11.5□□□□□ -0.57
MSI2-209ENST00000579483 RTEL1Q9NZ71 1219 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms