RNA–Protein interactions for RNA: ENST00000579339.5

LINC00271-205, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best)

Gene LINC00271, Length 397 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-205ENST00000579339 DHX36Q9H2U1 1008 aaKnown RBP32.55■■■□□ 2.8
LINC00271-205ENST00000579339 PI4KBQ9UBF8 816 aa32.55■■■□□ 2.8
LINC00271-205ENST00000579339 FOCADQ5VW36 1801 aa32.54■■■□□ 2.8
LINC00271-205ENST00000579339 USP5P45974 858 aa32.54■■■□□ 2.8
LINC00271-205ENST00000579339 RRP1BQ14684 758 aaKnown RBP32.54■■■□□ 2.8
LINC00271-205ENST00000579339 SLFNL1Q499Z3 407 aa32.54■■■□□ 2.8
LINC00271-205ENST00000579339 TSHZ3Q63HK5 1081 aa32.54■■■□□ 2.8
LINC00271-205ENST00000579339 RIOK1Q9BRS2 568 aaKnown RBP32.54■■■□□ 2.8
LINC00271-205ENST00000579339 SIPA1L1O43166 1804 aa32.54■■■□□ 2.8
LINC00271-205ENST00000579339 DOCK1Q14185 1865 aa32.53■■■□□ 2.8
LINC00271-205ENST00000579339 CCDC85CA6NKD9 419 aa32.53■■■□□ 2.8
LINC00271-205ENST00000579339 TMED8Q6PL24 325 aaPredicted RBP32.53■■■□□ 2.8
LINC00271-205ENST00000579339 ZFYVE28Q9HCC9 887 aa32.53■■■□□ 2.8
LINC00271-205ENST00000579339 MAGEB6P1A0A0J9YX57 407 aa32.52■■■□□ 2.8
LINC00271-205ENST00000579339 TCRBV5S4A2TA0A5A2 114 aa32.52■■■□□ 2.8
LINC00271-205ENST00000579339 MOGSQ13724 837 aa32.52■■■□□ 2.8
LINC00271-205ENST00000579339 CERS3Q8IU89 383 aa32.52■■■□□ 2.8
LINC00271-205ENST00000579339 DNAJC18Q9H819 358 aa32.52■■■□□ 2.8
LINC00271-205ENST00000579339 ECHDC1Q9NTX5 307 aa32.52■■■□□ 2.8
LINC00271-205ENST00000579339 HERC5Q9UII4 1024 aaKnown RBP32.52■■■□□ 2.8
LINC00271-205ENST00000579339 AFG3L2Q9Y4W6 797 aa32.51■■■□□ 2.79
LINC00271-205ENST00000579339 CXCL11O14625 94 aa32.5■■■□□ 2.79
LINC00271-205ENST00000579339 CHGBP05060 677 aa32.5■■■□□ 2.79
LINC00271-205ENST00000579339 CRACR2BQ8N4Y2 399 aaPredicted RBP32.49■■■□□ 2.79
LINC00271-205ENST00000579339 CD99L2Q8TCZ2 262 aa32.49■■■□□ 2.79
LINC00271-205ENST00000579339 TRIM75PA6NK02 468 aa32.48■■■□□ 2.79
LINC00271-205ENST00000579339 HLA-DOAP06340 250 aa32.48■■■□□ 2.79
LINC00271-205ENST00000579339 ADD2P35612 726 aa32.48■■■□□ 2.79
LINC00271-205ENST00000579339 CAP2P40123 477 aa32.48■■■□□ 2.79
LINC00271-205ENST00000579339 ANKRD23Q86SG2 305 aa32.48■■■□□ 2.79
LINC00271-205ENST00000579339 LCORLQ8N3X6 602 aa32.48■■■□□ 2.79
LINC00271-205ENST00000579339 TRIM34Q9BYJ4 488 aa32.48■■■□□ 2.79
LINC00271-205ENST00000579339 ZCCHC17Q9NP64 241 aaKnown RBP32.48■■■□□ 2.79
LINC00271-205ENST00000579339 A0A0G2JLL6 359 aaPredicted RBP32.47■■■□□ 2.79
LINC00271-205ENST00000579339 PDHXO00330 501 aa32.47■■■□□ 2.79
LINC00271-205ENST00000579339 SP3Q02447 781 aa32.47■■■□□ 2.79
LINC00271-205ENST00000579339 PRRT2Q7Z6L0 340 aaPredicted RBP32.47■■■□□ 2.79
LINC00271-205ENST00000579339 FOXP4Q8IVH2 680 aaPredicted RBP32.47■■■□□ 2.79
LINC00271-205ENST00000579339 CAP1Q01518 475 aa32.46■■■□□ 2.79
LINC00271-205ENST00000579339 GADL1Q6ZQY3 521 aa32.46■■■□□ 2.79
LINC00271-205ENST00000579339 METTL16Q86W50 562 aaKnown RBP32.46■■■□□ 2.79
LINC00271-205ENST00000579339 OTUD7AQ8TE49 926 aaPredicted RBP32.46■■■□□ 2.79
LINC00271-205ENST00000579339 ERO1AQ96HE7 468 aa32.46■■■□□ 2.79
LINC00271-205ENST00000579339 GPATCH3Q96I76 525 aa32.46■■■□□ 2.79
LINC00271-205ENST00000579339 DDX24Q9GZR7 859 aaKnown RBP eCLIP32.46■■■□□ 2.79
LINC00271-205ENST00000579339 TRIM17Q9Y577 477 aa32.46■■■□□ 2.79
LINC00271-205ENST00000579339 PHIPQ8WWQ0 1821 aa32.45■■■□□ 2.79
LINC00271-205ENST00000579339 JAG1P78504 1218 aa32.45■■■□□ 2.79
LINC00271-205ENST00000579339 SHROOM1Q2M3G4 852 aaPredicted RBP32.45■■■□□ 2.79
LINC00271-205ENST00000579339 GPAT2Q6NUI2 795 aa32.45■■■□□ 2.79
LINC00271-205ENST00000579339 CRNKL1Q9BZJ0 848 aaKnown RBP32.45■■■□□ 2.79
LINC00271-205ENST00000579339 ARMT1Q9H993 441 aa32.45■■■□□ 2.79
LINC00271-205ENST00000579339 MYH1P12882 1939 aa32.44■■■□□ 2.78
LINC00271-205ENST00000579339 TLR2O60603 784 aa32.44■■■□□ 2.78
LINC00271-205ENST00000579339 SDR42E1Q8WUS8 393 aa32.44■■■□□ 2.78
LINC00271-205ENST00000579339 MBD4O95243 580 aa32.43■■■□□ 2.78
LINC00271-205ENST00000579339 GDF11O95390 407 aa32.43■■■□□ 2.78
LINC00271-205ENST00000579339 PKN2Q16513 984 aaKnown RBP32.43■■■□□ 2.78
LINC00271-205ENST00000579339 OTOP1Q7RTM1 612 aa32.43■■■□□ 2.78
LINC00271-205ENST00000579339 HPS5Q9UPZ3 1129 aa32.43■■■□□ 2.78
LINC00271-205ENST00000579339 ATAD5Q96QE3 1844 aa32.42■■■□□ 2.78
LINC00271-205ENST00000579339 SPP2Q13103 211 aa32.42■■■□□ 2.78
LINC00271-205ENST00000579339 USP17L5A8MUK1 530 aa32.41■■■□□ 2.78
LINC00271-205ENST00000579339 FASTKD5Q7L8L6 764 aaKnown RBP32.41■■■□□ 2.78
LINC00271-205ENST00000579339 EXOC6Q8TAG9 804 aa32.41■■■□□ 2.78
LINC00271-205ENST00000579339 CPA4Q9UI42 421 aa32.41■■■□□ 2.78
LINC00271-205ENST00000579339 PRKAB2O43741 272 aa32.4■■■□□ 2.78
LINC00271-205ENST00000579339 CYP2C8P10632 490 aa32.4■■■□□ 2.78
LINC00271-205ENST00000579339 PLCD1P51178 756 aa32.4■■■□□ 2.78
LINC00271-205ENST00000579339 EVX2Q03828 476 aa32.4■■■□□ 2.78
LINC00271-205ENST00000579339 HDAC1Q13547 482 aaPredicted RBP32.4■■■□□ 2.78
LINC00271-205ENST00000579339 UBE3CQ15386 1083 aa32.4■■■□□ 2.78
LINC00271-205ENST00000579339 FBXO46Q6PJ61 603 aaPredicted RBP32.4■■■□□ 2.78
LINC00271-205ENST00000579339 ZNF280CQ8ND82 737 aa32.4■■■□□ 2.78
LINC00271-205ENST00000579339 MCM9Q9NXL9 1143 aa32.4■■■□□ 2.78
LINC00271-205ENST00000579339 SERPINB13Q9UIV8 391 aa32.4■■■□□ 2.78
LINC00271-205ENST00000579339 SUPT16HQ9Y5B9 1047 aaKnown RBP32.4■■■□□ 2.78
LINC00271-205ENST00000579339 NAV1Q8NEY1 1877 aa32.4■■■□□ 2.78
LINC00271-205ENST00000579339 PTPRFP10586 1907 aa32.39■■■□□ 2.78
LINC00271-205ENST00000579339 POLR3DP05423 398 aaPredicted RBP32.39■■■□□ 2.78
LINC00271-205ENST00000579339 ANKRD45Q5TZF3 282 aa32.39■■■□□ 2.78
LINC00271-205ENST00000579339 TTC6Q86TZ1 520 aa32.39■■■□□ 2.78
LINC00271-205ENST00000579339 EFCC1Q9HA90 598 aa32.39■■■□□ 2.78
LINC00271-205ENST00000579339 DDX60LQ5H9U9 1706 aaKnown RBP32.39■■■□□ 2.78
LINC00271-205ENST00000579339 ADGRA2Q96PE1 1338 aa32.38■■■□□ 2.77
LINC00271-205ENST00000579339 ECM2O94769 699 aaPredicted RBP32.38■■■□□ 2.77
LINC00271-205ENST00000579339 ASNSP08243 561 aa32.38■■■□□ 2.77
LINC00271-205ENST00000579339 ZSCAN25Q6NSZ9 544 aa32.38■■■□□ 2.77
LINC00271-205ENST00000579339 EHD4Q9H223 541 aa32.38■■■□□ 2.77
LINC00271-205ENST00000579339 ZBTB21Q9ULJ3 1066 aa32.38■■■□□ 2.77
LINC00271-205ENST00000579339 C17orf99Q6UX52 265 aa32.37■■■□□ 2.77
LINC00271-205ENST00000579339 KBTBD3Q8NAB2 608 aa32.37■■■□□ 2.77
LINC00271-205ENST00000579339 PI4K2BQ8TCG2 481 aa32.37■■■□□ 2.77
LINC00271-205ENST00000579339 PARK7Q99497 189 aaKnown RBP32.37■■■□□ 2.77
LINC00271-205ENST00000579339 DCP1AQ9NPI6 582 aaPredicted RBP32.37■■■□□ 2.77
LINC00271-205ENST00000579339 MYH7P12883 1935 aa32.37■■■□□ 2.77
LINC00271-205ENST00000579339 TTC41PQ6P2S7 1318 aa32.36■■■□□ 2.77
LINC00271-205ENST00000579339 CYP2D6P10635 497 aa32.36■■■□□ 2.77
LINC00271-205ENST00000579339 HMGCS2P54868 508 aa32.36■■■□□ 2.77
LINC00271-205ENST00000579339 TREML2Q5T2D2 321 aa32.36■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms