RNA–Protein interactions for RNA: ENST00000579329.1

LIMD2-207, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 920 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-207ENST00000579329 UBE3CQ15386 1083 aa28.92■■■□□ 2.22
LIMD2-207ENST00000579329 IFNL1Q8IU54 200 aa28.92■■■□□ 2.22
LIMD2-207ENST00000579329 SCYL3Q8IZE3 742 aa28.92■■■□□ 2.22
LIMD2-207ENST00000579329 CRNKL1Q9BZJ0 848 aaKnown RBP28.92■■■□□ 2.22
LIMD2-207ENST00000579329 HERC5Q9UII4 1024 aaKnown RBP28.92■■■□□ 2.22
LIMD2-207ENST00000579329 MYH7P12883 1935 aa28.92■■■□□ 2.22
LIMD2-207ENST00000579329 SALL3Q9BXA9 1300 aa28.92■■■□□ 2.22
LIMD2-207ENST00000579329 TESPA1A2RU30 521 aaPredicted RBP28.91■■■□□ 2.22
LIMD2-207ENST00000579329 IGHDP01880 384 aa28.91■■■□□ 2.22
LIMD2-207ENST00000579329 KBTBD3Q8NAB2 608 aa28.91■■■□□ 2.22
LIMD2-207ENST00000579329 PI4K2BQ8TCG2 481 aa28.91■■■□□ 2.22
LIMD2-207ENST00000579329 MS4A4AQ96JQ5 239 aa28.91■■■□□ 2.22
LIMD2-207ENST00000579329 SAP30BPQ9UHR5 308 aaKnown RBP28.91■■■□□ 2.22
LIMD2-207ENST00000579329 FAM196BA6NMK8 535 aa28.9■■■□□ 2.22
LIMD2-207ENST00000579329 CTNND1O60716 968 aaKnown RBP28.9■■■□□ 2.22
LIMD2-207ENST00000579329 HLA-DOAP06340 250 aa28.9■■■□□ 2.22
LIMD2-207ENST00000579329 PICK1Q9NRD5 415 aa28.9■■■□□ 2.22
LIMD2-207ENST00000579329 PALD1Q9ULE6 856 aa28.9■■■□□ 2.22
LIMD2-207ENST00000579329 IGF2BP3O00425 579 aaKnown RBP eCLIP28.89■■■□□ 2.22
LIMD2-207ENST00000579329 IRF6O14896 467 aa28.89■■■□□ 2.22
LIMD2-207ENST00000579329 OTUD7BQ6GQQ9 843 aa28.89■■■□□ 2.22
LIMD2-207ENST00000579329 FOXP4Q8IVH2 680 aaPredicted RBP28.89■■■□□ 2.22
LIMD2-207ENST00000579329 LCORLQ8N3X6 602 aa28.89■■■□□ 2.22
LIMD2-207ENST00000579329 SIPA1L1O43166 1804 aa28.89■■■□□ 2.22
LIMD2-207ENST00000579329 CCL15-CCL14A0A0B4J2E2 113 aa28.88■■■□□ 2.21
LIMD2-207ENST00000579329 SOX10P56693 466 aa28.88■■■□□ 2.21
LIMD2-207ENST00000579329 SNAPC2Q13487 334 aa28.88■■■□□ 2.21
LIMD2-207ENST00000579329 CCL15Q16663 113 aa28.88■■■□□ 2.21
LIMD2-207ENST00000579329 CFHR5Q9BXR6 569 aa28.88■■■□□ 2.21
LIMD2-207ENST00000579329 TRIM34Q9BYJ4 488 aa28.88■■■□□ 2.21
LIMD2-207ENST00000579329 DOCK1Q14185 1865 aa28.88■■■□□ 2.21
LIMD2-207ENST00000579329 MYH1P12882 1939 aa28.87■■■□□ 2.21
LIMD2-207ENST00000579329 MBD4O95243 580 aa28.87■■■□□ 2.21
LIMD2-207ENST00000579329 CETPP11597 493 aa28.87■■■□□ 2.21
LIMD2-207ENST00000579329 SLFNL1Q499Z3 407 aa28.87■■■□□ 2.21
LIMD2-207ENST00000579329 CRACR2BQ8N4Y2 399 aaPredicted RBP28.87■■■□□ 2.21
LIMD2-207ENST00000579329 BRI3BPQ8WY22 251 aa28.87■■■□□ 2.21
LIMD2-207ENST00000579329 LNPKQ9C0E8 428 aa28.87■■■□□ 2.21
LIMD2-207ENST00000579329 ARMT1Q9H993 441 aa28.87■■■□□ 2.21
LIMD2-207ENST00000579329 TBC1D8O95759 1140 aa28.86■■■□□ 2.21
LIMD2-207ENST00000579329 B4GALNT3Q6L9W6 998 aa28.86■■■□□ 2.21
LIMD2-207ENST00000579329 METTL16Q86W50 562 aaKnown RBP28.86■■■□□ 2.21
LIMD2-207ENST00000579329 STAP2Q9UGK3 403 aa28.86■■■□□ 2.21
LIMD2-207ENST00000579329 KCNH4Q9UQ05 1017 aa28.86■■■□□ 2.21
LIMD2-207ENST00000579329 NAV1Q8NEY1 1877 aa28.85■■■□□ 2.21
LIMD2-207ENST00000579329 CHGBP05060 677 aa28.85■■■□□ 2.21
LIMD2-207ENST00000579329 PTPRAP18433 802 aa28.85■■■□□ 2.21
LIMD2-207ENST00000579329 LRRFIP1Q32MZ4 808 aaKnown RBP28.85■■■□□ 2.21
LIMD2-207ENST00000579329 TTC6Q86TZ1 520 aa28.85■■■□□ 2.21
LIMD2-207ENST00000579329 PTPN18Q99952 460 aa28.85■■■□□ 2.21
LIMD2-207ENST00000579329 DDX60LQ5H9U9 1706 aaKnown RBP28.84■■■□□ 2.21
LIMD2-207ENST00000579329 ZFYP08048 801 aaPredicted RBP28.84■■■□□ 2.21
LIMD2-207ENST00000579329 PDE1AP54750 535 aa28.84■■■□□ 2.21
LIMD2-207ENST00000579329 SLC4A8Q2Y0W8 1093 aa28.84■■■□□ 2.21
LIMD2-207ENST00000579329 RNF113AO15541 343 aaKnown RBP28.83■■■□□ 2.21
LIMD2-207ENST00000579329 CAP2P40123 477 aa28.83■■■□□ 2.21
LIMD2-207ENST00000579329 NUCB1Q02818 461 aa28.83■■■□□ 2.21
LIMD2-207ENST00000579329 CHD1LQ86WJ1 897 aa28.83■■■□□ 2.21
LIMD2-207ENST00000579329 SDR42E1Q8WUS8 393 aa28.83■■■□□ 2.21
LIMD2-207ENST00000579329 EHD4Q9H223 541 aa28.83■■■□□ 2.21
LIMD2-207ENST00000579329 DNAJC18Q9H819 358 aa28.83■■■□□ 2.21
LIMD2-207ENST00000579329 ZHX2Q9Y6X8 837 aa28.83■■■□□ 2.21
LIMD2-207ENST00000579329 CXCL11O14625 94 aa28.82■■■□□ 2.2
LIMD2-207ENST00000579329 NOM1Q5C9Z4 860 aaKnown RBP28.82■■■□□ 2.2
LIMD2-207ENST00000579329 APPBP2Q92624 585 aa28.82■■■□□ 2.2
LIMD2-207ENST00000579329 PUS7LQ9H0K6 701 aaKnown RBP28.82■■■□□ 2.2
LIMD2-207ENST00000579329 DCP1AQ9NPI6 582 aaPredicted RBP28.82■■■□□ 2.2
LIMD2-207ENST00000579329 POLR3DP05423 398 aaPredicted RBP28.81■■■□□ 2.2
LIMD2-207ENST00000579329 FSD1Q9BTV5 496 aa28.81■■■□□ 2.2
LIMD2-207ENST00000579329 MCM9Q9NXL9 1143 aa28.81■■■□□ 2.2
LIMD2-207ENST00000579329 RRP1BQ14684 758 aaKnown RBP28.8■■■□□ 2.2
LIMD2-207ENST00000579329 CTU1Q7Z7A3 348 aaKnown RBP28.8■■■□□ 2.2
LIMD2-207ENST00000579329 ZCCHC17Q9NP64 241 aaKnown RBP28.8■■■□□ 2.2
LIMD2-207ENST00000579329 ATP8A2Q9NTI2 1148 aa28.8■■■□□ 2.2
LIMD2-207ENST00000579329 SERPINB13Q9UIV8 391 aa28.8■■■□□ 2.2
LIMD2-207ENST00000579329 ATAD5Q96QE3 1844 aa28.79■■■□□ 2.2
LIMD2-207ENST00000579329 GPR25O00155 361 aa28.79■■■□□ 2.2
LIMD2-207ENST00000579329 PRKAB2O43741 272 aa28.79■■■□□ 2.2
LIMD2-207ENST00000579329 FAM43AQ8N2R8 423 aa28.79■■■□□ 2.2
LIMD2-207ENST00000579329 TBC1D2Q9BYX2 928 aa28.79■■■□□ 2.2
LIMD2-207ENST00000579329 AFG3L2Q9Y4W6 797 aa28.79■■■□□ 2.2
LIMD2-207ENST00000579329 BTBD19C9JJ37 291 aa28.78■■■□□ 2.2
LIMD2-207ENST00000579329 DDRGK1Q96HY6 314 aa28.78■■■□□ 2.2
LIMD2-207ENST00000579329 R3HDMLQ9H3Y0 253 aa28.78■■■□□ 2.2
LIMD2-207ENST00000579329 GINM1Q9NU53 330 aa28.78■■■□□ 2.2
LIMD2-207ENST00000579329 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.78■■■□□ 2.2
LIMD2-207ENST00000579329 SLC4A4Q9Y6R1 1079 aa28.78■■■□□ 2.2
LIMD2-207ENST00000579329 PLCD1P51178 756 aa28.77■■■□□ 2.2
LIMD2-207ENST00000579329 CRHR2Q13324 411 aa28.77■■■□□ 2.2
LIMD2-207ENST00000579329 TAF1CQ15572 869 aaPredicted RBP28.77■■■□□ 2.2
LIMD2-207ENST00000579329 CCDC84Q86UT8 332 aaPredicted RBP28.77■■■□□ 2.2
LIMD2-207ENST00000579329 ZNF296Q8WUU4 475 aaPredicted RBP28.77■■■□□ 2.2
LIMD2-207ENST00000579329 OSBP2Q969R2 916 aa28.77■■■□□ 2.2
LIMD2-207ENST00000579329 PCDH10Q9P2E7 1040 aa28.77■■■□□ 2.2
LIMD2-207ENST00000579329 PHIPQ8WWQ0 1821 aa28.77■■■□□ 2.2
LIMD2-207ENST00000579329 ASNSP08243 561 aa28.76■■■□□ 2.19
LIMD2-207ENST00000579329 ANKRD23Q86SG2 305 aa28.76■■■□□ 2.19
LIMD2-207ENST00000579329 EVI5LQ96CN4 794 aa28.76■■■□□ 2.19
LIMD2-207ENST00000579329 STRBPQ96SI9 672 aaKnown RBP28.76■■■□□ 2.19
LIMD2-207ENST00000579329 ZFYVE28Q9HCC9 887 aa28.76■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms