RNA–Protein interactions for RNA: ENST00000579238.1

CASC3-206, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 517 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-206ENST00000579238 ZNF384Q8TF68 577 aa10.58□□□□□ -0.72
CASC3-206ENST00000579238 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.58□□□□□ -0.72
CASC3-206ENST00000579238 TAOK2Q9UL54 1235 aa10.58□□□□□ -0.72
CASC3-206ENST00000579238 PHIPQ8WWQ0 1821 aa10.58□□□□□ -0.72
CASC3-206ENST00000579238 COL2A1P02458 1487 aaPredicted RBP10.57□□□□□ -0.72
CASC3-206ENST00000579238 SRGAP3O43295 1099 aa10.57□□□□□ -0.72
CASC3-206ENST00000579238 GNAI3P08754 354 aa10.57□□□□□ -0.72
CASC3-206ENST00000579238 TFCP2Q12800 502 aa10.57□□□□□ -0.72
CASC3-206ENST00000579238 SPP2Q13103 211 aa10.57□□□□□ -0.72
CASC3-206ENST00000579238 PABPC4Q13310 644 aaKnown RBP eCLIP10.57□□□□□ -0.72
CASC3-206ENST00000579238 MTX1Q13505 466 aa10.57□□□□□ -0.72
CASC3-206ENST00000579238 ZNF280CQ8ND82 737 aa10.57□□□□□ -0.72
CASC3-206ENST00000579238 NSUN4Q96CB9 384 aaKnown RBP10.57□□□□□ -0.72
CASC3-206ENST00000579238 HMG20BQ9P0W2 317 aa10.57□□□□□ -0.72
CASC3-206ENST00000579238 FAM196BA6NMK8 535 aa10.56□□□□□ -0.72
CASC3-206ENST00000579238 CAP2P40123 477 aa10.56□□□□□ -0.72
CASC3-206ENST00000579238 NECAB2Q7Z6G3 386 aa10.56□□□□□ -0.72
CASC3-206ENST00000579238 SPATA5Q8NB90 893 aa10.56□□□□□ -0.72
CASC3-206ENST00000579238 ARHGAP45Q92619 1136 aa10.56□□□□□ -0.72
CASC3-206ENST00000579238 PAWRQ96IZ0 340 aaKnown RBP10.56□□□□□ -0.72
CASC3-206ENST00000579238 NEUROD6Q96NK8 337 aa10.56□□□□□ -0.72
CASC3-206ENST00000579238 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.56□□□□□ -0.72
CASC3-206ENST00000579238 HERC5Q9UII4 1024 aaKnown RBP10.56□□□□□ -0.72
CASC3-206ENST00000579238 DOCK3Q8IZD9 2030 aa10.56□□□□□ -0.72
CASC3-206ENST00000579238 USP17L5A8MUK1 530 aa10.55□□□□□ -0.72
CASC3-206ENST00000579238 HMGCRP04035 888 aa10.55□□□□□ -0.72
CASC3-206ENST00000579238 ARID4AP29374 1257 aaPredicted RBP10.55□□□□□ -0.72
CASC3-206ENST00000579238 RARSP54136 660 aaKnown RBP10.55□□□□□ -0.72
CASC3-206ENST00000579238 HMGCS2P54868 508 aa10.55□□□□□ -0.72
CASC3-206ENST00000579238 SH3D19Q5HYK7 790 aa10.55□□□□□ -0.72
CASC3-206ENST00000579238 GORABQ5T7V8 394 aa10.55□□□□□ -0.72
CASC3-206ENST00000579238 TBC1D9Q6ZT07 1266 aa10.55□□□□□ -0.72
CASC3-206ENST00000579238 TEX11Q8IYF3 940 aa10.55□□□□□ -0.72
CASC3-206ENST00000579238 ANKLE1Q8NAG6 615 aa10.55□□□□□ -0.72
CASC3-206ENST00000579238 ASCC2Q9H1I8 757 aaPredicted RBP10.55□□□□□ -0.72
CASC3-206ENST00000579238 AS3MTQ9HBK9 375 aa10.55□□□□□ -0.72
CASC3-206ENST00000579238 RAI14Q9P0K7 980 aa10.55□□□□□ -0.72
CASC3-206ENST00000579238 GJD2Q9UKL4 321 aa10.55□□□□□ -0.72
CASC3-206ENST00000579238 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.55□□□□□ -0.72
CASC3-206ENST00000579238 RPTORQ8N122 1335 aa10.55□□□□□ -0.72
CASC3-206ENST00000579238 UQCRFS1P1P0C7P4 283 aa10.54□□□□□ -0.72
CASC3-206ENST00000579238 RRP1BQ14684 758 aaKnown RBP10.54□□□□□ -0.72
CASC3-206ENST00000579238 PI16Q6UXB8 463 aa10.54□□□□□ -0.72
CASC3-206ENST00000579238 DIS3LQ8TF46 1054 aaKnown RBP10.54□□□□□ -0.72
CASC3-206ENST00000579238 WDR18Q9BV38 432 aa10.54□□□□□ -0.72
CASC3-206ENST00000579238 DHX36Q9H2U1 1008 aaKnown RBP10.54□□□□□ -0.72
CASC3-206ENST00000579238 HMX1Q9NP08 348 aaPredicted RBP10.54□□□□□ -0.72
CASC3-206ENST00000579238 PI4KBQ9UBF8 816 aa10.54□□□□□ -0.72
CASC3-206ENST00000579238 MORF4L1Q9UBU8 362 aa10.54□□□□□ -0.72
CASC3-206ENST00000579238 STAP2Q9UGK3 403 aa10.54□□□□□ -0.72
CASC3-206ENST00000579238 LOC285556D6RIA3 1793 aa10.54□□□□□ -0.72
CASC3-206ENST00000579238 ASNSP08243 561 aa10.53□□□□□ -0.72
CASC3-206ENST00000579238 PLCG2P16885 1265 aa10.53□□□□□ -0.72
CASC3-206ENST00000579238 HOXA7P31268 230 aaPredicted RBP10.53□□□□□ -0.72
CASC3-206ENST00000579238 BMP8BP34820 402 aa10.53□□□□□ -0.72
CASC3-206ENST00000579238 MCAMP43121 646 aa10.53□□□□□ -0.72
CASC3-206ENST00000579238 BACE1P56817 501 aa10.53□□□□□ -0.72
CASC3-206ENST00000579238 IRX3P78415 501 aaPredicted RBP10.53□□□□□ -0.72
CASC3-206ENST00000579238 G3BP1Q13283 466 aaKnown RBP eCLIP10.53□□□□□ -0.72
CASC3-206ENST00000579238 SH3RF3Q8TEJ3 882 aaPredicted RBP10.53□□□□□ -0.72
CASC3-206ENST00000579238 GDF15Q99988 308 aa10.53□□□□□ -0.72
CASC3-206ENST00000579238 NOL10Q9BSC4 688 aaKnown RBP10.53□□□□□ -0.72
CASC3-206ENST00000579238 TMOD4Q9NZQ9 345 aa10.53□□□□□ -0.72
CASC3-206ENST00000579238 LRP2BPQ9P2M1 347 aa10.53□□□□□ -0.72
CASC3-206ENST00000579238 LAMA3Q16787 3333 aa10.53□□□□□ -0.72
CASC3-206ENST00000579238 SOX1O00570 391 aaPredicted RBP10.52□□□□□ -0.73
CASC3-206ENST00000579238 BAG3O95817 575 aa10.52□□□□□ -0.73
CASC3-206ENST00000579238 GNAI2P04899 355 aa10.52□□□□□ -0.73
CASC3-206ENST00000579238 PPP4CP60510 307 aa10.52□□□□□ -0.73
CASC3-206ENST00000579238 TRIM32Q13049 653 aa10.52□□□□□ -0.73
CASC3-206ENST00000579238 MTMR2Q13614 643 aa10.52□□□□□ -0.73
CASC3-206ENST00000579238 NAA16Q6N069 864 aaPredicted RBP10.52□□□□□ -0.73
CASC3-206ENST00000579238 METTL16Q86W50 562 aaKnown RBP10.52□□□□□ -0.73
CASC3-206ENST00000579238 C7orf61Q8IZ16 206 aa10.52□□□□□ -0.73
CASC3-206ENST00000579238 SOCS4Q8WXH5 440 aa10.52□□□□□ -0.73
CASC3-206ENST00000579238 LRCH3Q96II8 777 aa10.52□□□□□ -0.73
CASC3-206ENST00000579238 NBPF3Q9H094 633 aa10.52□□□□□ -0.73
CASC3-206ENST00000579238 GINM1Q9NU53 330 aa10.52□□□□□ -0.73
CASC3-206ENST00000579238 OGDHLQ9ULD0 1010 aa10.52□□□□□ -0.73
CASC3-206ENST00000579238 PNMA6EA0A0J9YXQ4 647 aa10.51□□□□□ -0.73
CASC3-206ENST00000579238 C19orf81C9J6K1 198 aa10.51□□□□□ -0.73
CASC3-206ENST00000579238 IPO8O15397 1037 aaKnown RBP10.51□□□□□ -0.73
CASC3-206ENST00000579238 XRCC5P13010 732 aaKnown RBP10.51□□□□□ -0.73
CASC3-206ENST00000579238 CYP2B6P20813 491 aa10.51□□□□□ -0.73
CASC3-206ENST00000579238 MNX1P50219 401 aaPredicted RBP10.51□□□□□ -0.73
CASC3-206ENST00000579238 MAP3K21Q5TCX8 1036 aa10.51□□□□□ -0.73
CASC3-206ENST00000579238 GPR153Q6NV75 609 aa10.51□□□□□ -0.73
CASC3-206ENST00000579238 FOXP4Q8IVH2 680 aaPredicted RBP10.51□□□□□ -0.73
CASC3-206ENST00000579238 SLC17A8Q8NDX2 589 aa10.51□□□□□ -0.73
CASC3-206ENST00000579238 GPRC5AQ8NFJ5 357 aa10.51□□□□□ -0.73
CASC3-206ENST00000579238 TGFBRAP1Q8WUH2 860 aa10.51□□□□□ -0.73
CASC3-206ENST00000579238 TRIB2Q92519 343 aa10.51□□□□□ -0.73
CASC3-206ENST00000579238 P2RX7Q99572 595 aaKnown RBP10.51□□□□□ -0.73
CASC3-206ENST00000579238 NUDT12Q9BQG2 462 aa10.51□□□□□ -0.73
CASC3-206ENST00000579238 C11orf49Q9H6J7 331 aa10.51□□□□□ -0.73
CASC3-206ENST00000579238 AATFQ9NY61 560 aaKnown RBP eCLIP10.51□□□□□ -0.73
CASC3-206ENST00000579238 ZMYND8Q9ULU4 1186 aaPredicted RBP10.51□□□□□ -0.73
CASC3-206ENST00000579238 ATAD5Q96QE3 1844 aa10.51□□□□□ -0.73
CASC3-206ENST00000579238 ALPK3Q96L96 1907 aa10.5□□□□□ -0.73
CASC3-206ENST00000579238 USP17L10C9JJH3 530 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms