RNA–Protein interactions for RNA: ENST00000579122.1

CDKN2A-213, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3 BASIC

Gene CDKN2A, Length 666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-213ENST00000579122 PI16Q6UXB8 463 aa23.68■■□□□ 1.38
CDKN2A-213ENST00000579122 TBC1D2Q9BYX2 928 aa23.68■■□□□ 1.38
CDKN2A-213ENST00000579122 FAM196BA6NMK8 535 aa23.67■■□□□ 1.38
CDKN2A-213ENST00000579122 IPO8O15397 1037 aaKnown RBP23.67■■□□□ 1.38
CDKN2A-213ENST00000579122 FARP2O94887 1054 aaPredicted RBP23.67■■□□□ 1.38
CDKN2A-213ENST00000579122 GNAI2P04899 355 aa23.67■■□□□ 1.38
CDKN2A-213ENST00000579122 INHAP05111 366 aa23.67■■□□□ 1.38
CDKN2A-213ENST00000579122 ELNP15502 786 aa23.67■■□□□ 1.38
CDKN2A-213ENST00000579122 TBC1D9Q6ZT07 1266 aa23.67■■□□□ 1.38
CDKN2A-213ENST00000579122 ANKRD13CQ8N6S4 541 aa23.67■■□□□ 1.38
CDKN2A-213ENST00000579122 RAI14Q9P0K7 980 aa23.67■■□□□ 1.38
CDKN2A-213ENST00000579122 TRIOBPQ9H2D6 2365 aa23.66■■□□□ 1.38
CDKN2A-213ENST00000579122 G3BP1Q13283 466 aaKnown RBP eCLIP23.66■■□□□ 1.38
CDKN2A-213ENST00000579122 FAM110CQ1W6H9 321 aa23.66■■□□□ 1.38
CDKN2A-213ENST00000579122 ZNF280CQ8ND82 737 aa23.66■■□□□ 1.38
CDKN2A-213ENST00000579122 COA7Q96BR5 231 aa23.66■■□□□ 1.38
CDKN2A-213ENST00000579122 UQCRFS1P1P0C7P4 283 aa23.65■■□□□ 1.38
CDKN2A-213ENST00000579122 SPP2Q13103 211 aa23.65■■□□□ 1.38
CDKN2A-213ENST00000579122 NR2E3Q9Y5X4 410 aa23.65■■□□□ 1.38
CDKN2A-213ENST00000579122 TRIM27P14373 513 aa23.64■■□□□ 1.37
CDKN2A-213ENST00000579122 CAP2P40123 477 aa23.64■■□□□ 1.37
CDKN2A-213ENST00000579122 MCAMP43121 646 aa23.64■■□□□ 1.37
CDKN2A-213ENST00000579122 GCLCP48506 637 aaPredicted RBP23.64■■□□□ 1.37
CDKN2A-213ENST00000579122 PABPC4Q13310 644 aaKnown RBP eCLIP23.64■■□□□ 1.37
CDKN2A-213ENST00000579122 TEX11Q8IYF3 940 aa23.64■■□□□ 1.37
CDKN2A-213ENST00000579122 RBM27Q9P2N5 1060 aaKnown RBP23.64■■□□□ 1.37
CDKN2A-213ENST00000579122 HERC5Q9UII4 1024 aaKnown RBP23.64■■□□□ 1.37
CDKN2A-213ENST00000579122 LOC285556D6RIA3 1793 aa23.63■■□□□ 1.37
CDKN2A-213ENST00000579122 PNMA6EA0A0J9YXQ4 647 aa23.63■■□□□ 1.37
CDKN2A-213ENST00000579122 ATF7IPQ6VMQ6 1270 aa23.63■■□□□ 1.37
CDKN2A-213ENST00000579122 PAK6Q9NQU5 681 aaPredicted RBP23.63■■□□□ 1.37
CDKN2A-213ENST00000579122 LRP2BPQ9P2M1 347 aa23.63■■□□□ 1.37
CDKN2A-213ENST00000579122 USP17L5A8MUK1 530 aa23.62■■□□□ 1.37
CDKN2A-213ENST00000579122 CCER2I3L3R5 266 aa23.62■■□□□ 1.37
CDKN2A-213ENST00000579122 TFRCP02786 760 aaKnown RBP23.62■■□□□ 1.37
CDKN2A-213ENST00000579122 HMGCS2P54868 508 aa23.62■■□□□ 1.37
CDKN2A-213ENST00000579122 RRP1BQ14684 758 aaKnown RBP23.62■■□□□ 1.37
CDKN2A-213ENST00000579122 SH3D19Q5HYK7 790 aa23.62■■□□□ 1.37
CDKN2A-213ENST00000579122 DEFB118Q96PH6 123 aa23.62■■□□□ 1.37
CDKN2A-213ENST00000579122 NOL10Q9BSC4 688 aaKnown RBP23.62■■□□□ 1.37
CDKN2A-213ENST00000579122 PRO3102Q9H379 93 aa23.62■■□□□ 1.37
CDKN2A-213ENST00000579122 AS3MTQ9HBK9 375 aa23.62■■□□□ 1.37
CDKN2A-213ENST00000579122 ZBTB7BO15156 539 aaPredicted RBP23.61■■□□□ 1.37
CDKN2A-213ENST00000579122 SH3RF3Q8TEJ3 882 aaPredicted RBP23.61■■□□□ 1.37
CDKN2A-213ENST00000579122 CRISPLD2Q9H0B8 497 aa23.61■■□□□ 1.37
CDKN2A-213ENST00000579122 DHX36Q9H2U1 1008 aaKnown RBP23.61■■□□□ 1.37
CDKN2A-213ENST00000579122 GPR108Q9NPR9 543 aa23.61■■□□□ 1.37
CDKN2A-213ENST00000579122 PI4KBQ9UBF8 816 aa23.61■■□□□ 1.37
CDKN2A-213ENST00000579122 TAOK2Q9UL54 1235 aa23.61■■□□□ 1.37
CDKN2A-213ENST00000579122 BAG3O95817 575 aa23.6■■□□□ 1.37
CDKN2A-213ENST00000579122 FRAT1Q92837 279 aaPredicted RBP23.6■■□□□ 1.37
CDKN2A-213ENST00000579122 ASCC2Q9H1I8 757 aaPredicted RBP23.6■■□□□ 1.37
CDKN2A-213ENST00000579122 TNNQ9UQP3 1299 aa23.6■■□□□ 1.37
CDKN2A-213ENST00000579122 ATAD5Q96QE3 1844 aa23.6■■□□□ 1.37
CDKN2A-213ENST00000579122 PLCG2P16885 1265 aa23.59■■□□□ 1.37
CDKN2A-213ENST00000579122 WDR18Q9BV38 432 aa23.59■■□□□ 1.37
CDKN2A-213ENST00000579122 BCAR3O75815 825 aa23.58■■□□□ 1.37
CDKN2A-213ENST00000579122 PPP4CP60510 307 aa23.58■■□□□ 1.37
CDKN2A-213ENST00000579122 TTC39AQ5SRH9 613 aa23.58■■□□□ 1.37
CDKN2A-213ENST00000579122 NAA16Q6N069 864 aaPredicted RBP23.58■■□□□ 1.37
CDKN2A-213ENST00000579122 AATFQ9NY61 560 aaKnown RBP eCLIP23.58■■□□□ 1.37
CDKN2A-213ENST00000579122 EVI5O60447 810 aa23.57■■□□□ 1.36
CDKN2A-213ENST00000579122 IGSF3O75054 1194 aa23.57■■□□□ 1.36
CDKN2A-213ENST00000579122 HMGCRP04035 888 aa23.57■■□□□ 1.36
CDKN2A-213ENST00000579122 POLA2Q14181 598 aa23.57■■□□□ 1.36
CDKN2A-213ENST00000579122 CCDC158Q5M9N0 1113 aa23.57■■□□□ 1.36
CDKN2A-213ENST00000579122 CLUAP1Q96AJ1 413 aa23.57■■□□□ 1.36
CDKN2A-213ENST00000579122 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.57■■□□□ 1.36
CDKN2A-213ENST00000579122 SNRKQ9NRH2 765 aa23.57■■□□□ 1.36
CDKN2A-213ENST00000579122 MORF4L1Q9UBU8 362 aa23.57■■□□□ 1.36
CDKN2A-213ENST00000579122 GJD2Q9UKL4 321 aa23.57■■□□□ 1.36
CDKN2A-213ENST00000579122 MAST2Q6P0Q8 1798 aa23.57■■□□□ 1.36
CDKN2A-213ENST00000579122 ASNSP08243 561 aa23.56■■□□□ 1.36
CDKN2A-213ENST00000579122 TNNI3KQ59H18 835 aa23.56■■□□□ 1.36
CDKN2A-213ENST00000579122 METTL16Q86W50 562 aaKnown RBP23.56■■□□□ 1.36
CDKN2A-213ENST00000579122 FPGT-TNNI3KV9GXZ4 949 aa23.56■■□□□ 1.36
CDKN2A-213ENST00000579122 DOCK3Q8IZD9 2030 aa23.55■■□□□ 1.36
CDKN2A-213ENST00000579122 SIPA1L1O43166 1804 aa23.55■■□□□ 1.36
CDKN2A-213ENST00000579122 BACE1P56817 501 aa23.55■■□□□ 1.36
CDKN2A-213ENST00000579122 MTMR2Q13614 643 aa23.55■■□□□ 1.36
CDKN2A-213ENST00000579122 FOXP4Q8IVH2 680 aaPredicted RBP23.55■■□□□ 1.36
CDKN2A-213ENST00000579122 ANKLE1Q8NAG6 615 aa23.55■■□□□ 1.36
CDKN2A-213ENST00000579122 TGFBRAP1Q8WUH2 860 aa23.55■■□□□ 1.36
CDKN2A-213ENST00000579122 PAWRQ96IZ0 340 aaKnown RBP23.55■■□□□ 1.36
CDKN2A-213ENST00000579122 ZNF512BQ96KM6 892 aaPredicted RBP23.55■■□□□ 1.36
CDKN2A-213ENST00000579122 DBNDD2Q9BQY9 259 aa23.55■■□□□ 1.36
CDKN2A-213ENST00000579122 GINM1Q9NU53 330 aa23.55■■□□□ 1.36
CDKN2A-213ENST00000579122 FLT1P17948 1338 aa23.55■■□□□ 1.36
CDKN2A-213ENST00000579122 A0A1W2PPC1 479 aa23.54■■□□□ 1.36
CDKN2A-213ENST00000579122 CYP2E1P05181 493 aaPredicted RBP23.54■■□□□ 1.36
CDKN2A-213ENST00000579122 HOXA7P31268 230 aaPredicted RBP23.54■■□□□ 1.36
CDKN2A-213ENST00000579122 IRX3P78415 501 aaPredicted RBP23.54■■□□□ 1.36
CDKN2A-213ENST00000579122 NECAB2Q7Z6G3 386 aa23.54■■□□□ 1.36
CDKN2A-213ENST00000579122 MAPKAPK5Q8IW41 473 aa23.54■■□□□ 1.36
CDKN2A-213ENST00000579122 TMEM57Q8N5G2 664 aa23.54■■□□□ 1.36
CDKN2A-213ENST00000579122 SSH3Q8TE77 659 aa23.54■■□□□ 1.36
CDKN2A-213ENST00000579122 DNAJC18Q9H819 358 aa23.54■■□□□ 1.36
CDKN2A-213ENST00000579122 TMOD4Q9NZQ9 345 aa23.54■■□□□ 1.36
CDKN2A-213ENST00000579122 C19orf81C9J6K1 198 aa23.53■■□□□ 1.36
CDKN2A-213ENST00000579122 OS9Q13438 667 aaPredicted RBP23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms