RNA–Protein interactions for RNA: ENST00000578415.1

TSEN54-205, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 994 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-205ENST00000578415 SPP2Q13103 211 aa25.92■■□□□ 1.74
TSEN54-205ENST00000578415 RRP1BQ14684 758 aaKnown RBP25.92■■□□□ 1.74
TSEN54-205ENST00000578415 FAM110CQ1W6H9 321 aa25.92■■□□□ 1.74
TSEN54-205ENST00000578415 PROCA1Q8NCQ7 364 aaPredicted RBP25.92■■□□□ 1.74
TSEN54-205ENST00000578415 DEFB118Q96PH6 123 aa25.92■■□□□ 1.74
TSEN54-205ENST00000578415 PAK6Q9NQU5 681 aaPredicted RBP25.92■■□□□ 1.74
TSEN54-205ENST00000578415 NR2E3Q9Y5X4 410 aa25.92■■□□□ 1.74
TSEN54-205ENST00000578415 ZBTB7BO15156 539 aaPredicted RBP25.91■■□□□ 1.74
TSEN54-205ENST00000578415 MAP4K4O95819 1239 aaPredicted RBP25.91■■□□□ 1.74
TSEN54-205ENST00000578415 ARID4AP29374 1257 aaPredicted RBP25.91■■□□□ 1.74
TSEN54-205ENST00000578415 GSTO1P78417 241 aa25.91■■□□□ 1.74
TSEN54-205ENST00000578415 COA7Q96BR5 231 aa25.91■■□□□ 1.74
TSEN54-205ENST00000578415 PNMA3Q9UL41 463 aa25.91■■□□□ 1.74
TSEN54-205ENST00000578415 LDHCP07864 332 aa25.9■■□□□ 1.74
TSEN54-205ENST00000578415 ZNF280CQ8ND82 737 aa25.9■■□□□ 1.74
TSEN54-205ENST00000578415 TAOK2Q9UL54 1235 aa25.9■■□□□ 1.74
TSEN54-205ENST00000578415 CAP2P40123 477 aa25.89■■□□□ 1.74
TSEN54-205ENST00000578415 MCAMP43121 646 aa25.89■■□□□ 1.74
TSEN54-205ENST00000578415 GORABQ5T7V8 394 aa25.89■■□□□ 1.74
TSEN54-205ENST00000578415 CRISPLD2Q9H0B8 497 aa25.89■■□□□ 1.74
TSEN54-205ENST00000578415 RAI14Q9P0K7 980 aa25.89■■□□□ 1.74
TSEN54-205ENST00000578415 PNMA6EA0A0J9YXQ4 647 aa25.88■■□□□ 1.73
TSEN54-205ENST00000578415 TFRCP02786 760 aaKnown RBP25.88■■□□□ 1.73
TSEN54-205ENST00000578415 HMGCS2P54868 508 aa25.88■■□□□ 1.73
TSEN54-205ENST00000578415 TNNQ9UQP3 1299 aa25.88■■□□□ 1.73
TSEN54-205ENST00000578415 LOC285556D6RIA3 1793 aa25.87■■□□□ 1.73
TSEN54-205ENST00000578415 TRIM27P14373 513 aa25.87■■□□□ 1.73
TSEN54-205ENST00000578415 CAPN2P17655 700 aa25.87■■□□□ 1.73
TSEN54-205ENST00000578415 GCLCP48506 637 aaPredicted RBP25.87■■□□□ 1.73
TSEN54-205ENST00000578415 TEX11Q8IYF3 940 aa25.87■■□□□ 1.73
TSEN54-205ENST00000578415 TBC1D2Q9BYX2 928 aa25.87■■□□□ 1.73
TSEN54-205ENST00000578415 GNAI2P04899 355 aa25.86■■□□□ 1.73
TSEN54-205ENST00000578415 SH3D19Q5HYK7 790 aa25.86■■□□□ 1.73
TSEN54-205ENST00000578415 SH3RF3Q8TEJ3 882 aaPredicted RBP25.86■■□□□ 1.73
TSEN54-205ENST00000578415 ASCC2Q9H1I8 757 aaPredicted RBP25.86■■□□□ 1.73
TSEN54-205ENST00000578415 USP17L5A8MUK1 530 aa25.85■■□□□ 1.73
TSEN54-205ENST00000578415 EVI5O60447 810 aa25.85■■□□□ 1.73
TSEN54-205ENST00000578415 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.85■■□□□ 1.733e-6■■■■□ 19.8
TSEN54-205ENST00000578415 LRP2BPQ9P2M1 347 aa25.85■■□□□ 1.73
TSEN54-205ENST00000578415 HERC5Q9UII4 1024 aaKnown RBP25.85■■□□□ 1.73
TSEN54-205ENST00000578415 GJD2Q9UKL4 321 aa25.85■■□□□ 1.73
TSEN54-205ENST00000578415 G3BP1Q13283 466 aaKnown RBP eCLIP25.84■■□□□ 1.73
TSEN54-205ENST00000578415 PABPC4Q13310 644 aaKnown RBP eCLIP25.84■■□□□ 1.73
TSEN54-205ENST00000578415 DOCK3Q8IZD9 2030 aa25.84■■□□□ 1.73
TSEN54-205ENST00000578415 PAWRQ96IZ0 340 aaKnown RBP25.84■■□□□ 1.73
TSEN54-205ENST00000578415 UQCRFS1P1P0C7P4 283 aa25.83■■□□□ 1.73
TSEN54-205ENST00000578415 DIS3LQ8TF46 1054 aaKnown RBP25.83■■□□□ 1.73
TSEN54-205ENST00000578415 HMGCRP04035 888 aa25.82■■□□□ 1.72
TSEN54-205ENST00000578415 JAG1P78504 1218 aa25.82■■□□□ 1.72
TSEN54-205ENST00000578415 ATF7IPQ6VMQ6 1270 aa25.82■■□□□ 1.72
TSEN54-205ENST00000578415 SNRKQ9NRH2 765 aa25.82■■□□□ 1.72
TSEN54-205ENST00000578415 AATFQ9NY61 560 aaKnown RBP eCLIP25.82■■□□□ 1.72
TSEN54-205ENST00000578415 PI4KBQ9UBF8 816 aa25.82■■□□□ 1.72
TSEN54-205ENST00000578415 MORF4L1Q9UBU8 362 aa25.82■■□□□ 1.72
TSEN54-205ENST00000578415 IPO8O15397 1037 aaKnown RBP25.81■■□□□ 1.72
TSEN54-205ENST00000578415 TRIM32Q13049 653 aa25.81■■□□□ 1.72
TSEN54-205ENST00000578415 MTMR2Q13614 643 aa25.81■■□□□ 1.72
TSEN54-205ENST00000578415 WDR18Q9BV38 432 aa25.81■■□□□ 1.72
TSEN54-205ENST00000578415 DHX36Q9H2U1 1008 aaKnown RBP25.81■■□□□ 1.72
TSEN54-205ENST00000578415 DNAJC18Q9H819 358 aa25.81■■□□□ 1.72
TSEN54-205ENST00000578415 AS3MTQ9HBK9 375 aa25.81■■□□□ 1.72
TSEN54-205ENST00000578415 SIPA1L1O43166 1804 aa25.8■■□□□ 1.72
TSEN54-205ENST00000578415 ATAD5Q96QE3 1844 aa25.8■■□□□ 1.72
TSEN54-205ENST00000578415 BACE1P56817 501 aa25.8■■□□□ 1.72
TSEN54-205ENST00000578415 SHROOM1Q2M3G4 852 aaPredicted RBP25.8■■□□□ 1.72
TSEN54-205ENST00000578415 NAA16Q6N069 864 aaPredicted RBP25.8■■□□□ 1.72
TSEN54-205ENST00000578415 NECAB2Q7Z6G3 386 aa25.8■■□□□ 1.72
TSEN54-205ENST00000578415 ADGRA1Q86SQ6 560 aa25.8■■□□□ 1.72
TSEN54-205ENST00000578415 A0A1W2PPC1 479 aa25.79■■□□□ 1.72
TSEN54-205ENST00000578415 BCAR3O75815 825 aa25.79■■□□□ 1.72
TSEN54-205ENST00000578415 PPP4CP60510 307 aa25.79■■□□□ 1.72
TSEN54-205ENST00000578415 METTL16Q86W50 562 aaKnown RBP25.79■■□□□ 1.72
TSEN54-205ENST00000578415 TGFBRAP1Q8WUH2 860 aa25.79■■□□□ 1.72
TSEN54-205ENST00000578415 FRAT1Q92837 279 aaPredicted RBP25.79■■□□□ 1.72
TSEN54-205ENST00000578415 CLUAP1Q96AJ1 413 aa25.79■■□□□ 1.72
TSEN54-205ENST00000578415 NOL10Q9BSC4 688 aaKnown RBP25.79■■□□□ 1.72
TSEN54-205ENST00000578415 PEX10O60683 326 aa25.78■■□□□ 1.72
TSEN54-205ENST00000578415 BAG3O95817 575 aa25.78■■□□□ 1.72
TSEN54-205ENST00000578415 POLA2Q14181 598 aa25.78■■□□□ 1.72
TSEN54-205ENST00000578415 TNNI3KQ59H18 835 aa25.78■■□□□ 1.72
TSEN54-205ENST00000578415 MAPKAPK5Q8IW41 473 aa25.78■■□□□ 1.72
TSEN54-205ENST00000578415 P2RX7Q99572 595 aaKnown RBP25.78■■□□□ 1.72
TSEN54-205ENST00000578415 DBNDD2Q9BQY9 259 aa25.78■■□□□ 1.72
TSEN54-205ENST00000578415 GPR108Q9NPR9 543 aa25.78■■□□□ 1.72
TSEN54-205ENST00000578415 STAP2Q9UGK3 403 aa25.78■■□□□ 1.72
TSEN54-205ENST00000578415 FPGT-TNNI3KV9GXZ4 949 aa25.78■■□□□ 1.72
TSEN54-205ENST00000578415 FLT1P17948 1338 aa25.78■■□□□ 1.72
TSEN54-205ENST00000578415 RPTORQ8N122 1335 aa25.78■■□□□ 1.72
TSEN54-205ENST00000578415 SOX1O00570 391 aaPredicted RBP25.77■■□□□ 1.72
TSEN54-205ENST00000578415 CYP2E1P05181 493 aaPredicted RBP25.77■■□□□ 1.72
TSEN54-205ENST00000578415 ASNSP08243 561 aa25.77■■□□□ 1.72
TSEN54-205ENST00000578415 PLCG2P16885 1265 aa25.77■■□□□ 1.72
TSEN54-205ENST00000578415 HOXA7P31268 230 aaPredicted RBP25.77■■□□□ 1.72
TSEN54-205ENST00000578415 MNX1P50219 401 aaPredicted RBP25.77■■□□□ 1.72
TSEN54-205ENST00000578415 IRX3P78415 501 aaPredicted RBP25.77■■□□□ 1.72
TSEN54-205ENST00000578415 TTC39AQ5SRH9 613 aa25.77■■□□□ 1.72
TSEN54-205ENST00000578415 ANKLE1Q8NAG6 615 aa25.77■■□□□ 1.72
TSEN54-205ENST00000578415 TRIB2Q92519 343 aa25.77■■□□□ 1.72
TSEN54-205ENST00000578415 TXNRD2Q9NNW7 524 aa25.77■■□□□ 1.72
TSEN54-205ENST00000578415 HMX1Q9NP08 348 aaPredicted RBP25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms