RNA–Protein interactions for RNA: ENST00000578367.1

LINC01543-201, Transcript of long intergenic non-protein coding RNA 1543, humanhuman

TSL 5 BASIC

Gene LINC01543, Length 900 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01543-201ENST00000578367 RNF20Q5VTR2 975 aa16.5■□□□□ 0.23
LINC01543-201ENST00000578367 C16orf86Q6ZW13 317 aa16.5■□□□□ 0.23
LINC01543-201ENST00000578367 CRACR2BQ8N4Y2 399 aaPredicted RBP16.5■□□□□ 0.23
LINC01543-201ENST00000578367 C2orf69Q8N8R5 385 aa16.5■□□□□ 0.23
LINC01543-201ENST00000578367 RNF41Q9H4P4 317 aaPredicted RBP16.5■□□□□ 0.23
LINC01543-201ENST00000578367 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.5■□□□□ 0.23
LINC01543-201ENST00000578367 SAP30BPQ9UHR5 308 aaKnown RBP16.5■□□□□ 0.23
LINC01543-201ENST00000578367 ZNF112Q9UJU3 913 aa16.5■□□□□ 0.23
LINC01543-201ENST00000578367 FGRP09769 529 aa16.49■□□□□ 0.23
LINC01543-201ENST00000578367 PLCD1P51178 756 aa16.49■□□□□ 0.23
LINC01543-201ENST00000578367 PTH1RQ03431 593 aa16.49■□□□□ 0.23
LINC01543-201ENST00000578367 PDE4BQ07343 736 aa16.49■□□□□ 0.23
LINC01543-201ENST00000578367 TATDN1Q6P1N9 297 aa16.49■□□□□ 0.23
LINC01543-201ENST00000578367 CCDC17Q96LX7 622 aa16.49■□□□□ 0.23
LINC01543-201ENST00000578367 MINDY4BA8MYZ0 360 aa16.48■□□□□ 0.23
LINC01543-201ENST00000578367 TRAF5O00463 557 aa16.48■□□□□ 0.23
LINC01543-201ENST00000578367 CTNND1O60716 968 aaKnown RBP16.48■□□□□ 0.23
LINC01543-201ENST00000578367 CELF2O95319 508 aaKnown RBP16.48■□□□□ 0.23
LINC01543-201ENST00000578367 C8orf34Q49A92 452 aa16.48■□□□□ 0.23
LINC01543-201ENST00000578367 KLRG1Q96E93 195 aa16.48■□□□□ 0.23
LINC01543-201ENST00000578367 GBA2Q9HCG7 927 aaPredicted RBP16.48■□□□□ 0.23
LINC01543-201ENST00000578367 ORC4O43929 436 aa16.47■□□□□ 0.23
LINC01543-201ENST00000578367 USP2O75604 605 aaPredicted RBP16.47■□□□□ 0.23
LINC01543-201ENST00000578367 NECTIN1Q15223 517 aa16.47■□□□□ 0.23
LINC01543-201ENST00000578367 TSGA10IPQ3SY00 556 aa16.47■□□□□ 0.23
LINC01543-201ENST00000578367 NOL9Q5SY16 702 aaKnown RBP16.47■□□□□ 0.23
LINC01543-201ENST00000578367 PRAMEF18Q5VWM3 479 aa16.47■□□□□ 0.23
LINC01543-201ENST00000578367 STAG1Q8WVM7 1258 aa16.47■□□□□ 0.23
LINC01543-201ENST00000578367 HHIPL1Q96JK4 782 aa16.47■□□□□ 0.23
LINC01543-201ENST00000578367 CNNM2Q9H8M5 875 aa16.47■□□□□ 0.23
LINC01543-201ENST00000578367 SCAF8Q9UPN6 1271 aaKnown RBP16.47■□□□□ 0.23
LINC01543-201ENST00000578367 RBM8AQ9Y5S9 174 aaKnown RBP16.47■□□□□ 0.23
LINC01543-201ENST00000578367 TMEM88BA6NKF7 163 aa16.46■□□□□ 0.23
LINC01543-201ENST00000578367 PHF20L1A8MW92 1017 aa16.46■□□□□ 0.23
LINC01543-201ENST00000578367 MCCP23508 829 aa16.46■□□□□ 0.23
LINC01543-201ENST00000578367 CDK8P49336 464 aa16.46■□□□□ 0.23
LINC01543-201ENST00000578367 MAP3K9P80192 1104 aa16.46■□□□□ 0.23
LINC01543-201ENST00000578367 PPP4R3BQ5MIZ7 849 aa16.46■□□□□ 0.23
LINC01543-201ENST00000578367 AKNAD1Q5T1N1 836 aa16.46■□□□□ 0.23
LINC01543-201ENST00000578367 LDLRAD1Q5T700 205 aa16.46■□□□□ 0.23
LINC01543-201ENST00000578367 CST9Q5W186 159 aa16.46■□□□□ 0.23
LINC01543-201ENST00000578367 CDAN1Q8IWY9 1227 aa16.46■□□□□ 0.23
LINC01543-201ENST00000578367 ANKRD13AQ8IZ07 590 aa16.46■□□□□ 0.23
LINC01543-201ENST00000578367 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.46■□□□□ 0.23
LINC01543-201ENST00000578367 USP26Q9BXU7 913 aa16.46■□□□□ 0.23
LINC01543-201ENST00000578367 TBC1D2Q9BYX2 928 aa16.46■□□□□ 0.23
LINC01543-201ENST00000578367 FOCADQ5VW36 1801 aa16.46■□□□□ 0.23
LINC01543-201ENST00000578367 SSC5DA1L4H1 1573 aa16.46■□□□□ 0.23
LINC01543-201ENST00000578367 DDX60LQ5H9U9 1706 aaKnown RBP16.45■□□□□ 0.22
LINC01543-201ENST00000578367 CYP2D6P10635 497 aa16.45■□□□□ 0.22
LINC01543-201ENST00000578367 ZKSCAN1P17029 563 aaPredicted RBP16.45■□□□□ 0.22
LINC01543-201ENST00000578367 APLP1P51693 650 aa16.45■□□□□ 0.22
LINC01543-201ENST00000578367 KRT32Q14532 448 aa16.45■□□□□ 0.22
LINC01543-201ENST00000578367 MFSD6Q6ZSS7 791 aa16.45■□□□□ 0.22
LINC01543-201ENST00000578367 MIGA2Q7L4E1 593 aa16.45■□□□□ 0.22
LINC01543-201ENST00000578367 KCNB2Q92953 911 aa16.45■□□□□ 0.22
LINC01543-201ENST00000578367 DNAJC18Q9H819 358 aa16.45■□□□□ 0.22
LINC01543-201ENST00000578367 MKNK2Q9HBH9 465 aa16.45■□□□□ 0.22
LINC01543-201ENST00000578367 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.45■□□□□ 0.22
LINC01543-201ENST00000578367 ASNSP08243 561 aa16.44■□□□□ 0.22
LINC01543-201ENST00000578367 CYP21A2P08686 494 aa16.44■□□□□ 0.22
LINC01543-201ENST00000578367 SHMT1P34896 483 aa16.44■□□□□ 0.22
LINC01543-201ENST00000578367 HSPA4P34932 840 aa16.44■□□□□ 0.22
LINC01543-201ENST00000578367 CAP2P40123 477 aa16.44■□□□□ 0.22
LINC01543-201ENST00000578367 TTLL12Q14166 644 aaPredicted RBP16.44■□□□□ 0.22
LINC01543-201ENST00000578367 CERKLQ49MI3 558 aaPredicted RBP16.44■□□□□ 0.22
LINC01543-201ENST00000578367 ZNF444Q8N0Y2 327 aaPredicted RBP16.44■□□□□ 0.22
LINC01543-201ENST00000578367 WRNIP1Q96S55 665 aa16.44■□□□□ 0.22
LINC01543-201ENST00000578367 CREBZFQ9NS37 354 aa16.44■□□□□ 0.22
LINC01543-201ENST00000578367 ANGEL1Q9UNK9 670 aaKnown RBP16.44■□□□□ 0.22
LINC01543-201ENST00000578367 CSADQ9Y600 493 aa16.44■□□□□ 0.22
LINC01543-201ENST00000578367 CYP2D7A0A087X1C5 515 aa16.43■□□□□ 0.22
LINC01543-201ENST00000578367 SLC27A2O14975 620 aa16.43■□□□□ 0.22
LINC01543-201ENST00000578367 ANAPC15P60006 121 aa16.43■□□□□ 0.22
LINC01543-201ENST00000578367 TRDNQ13061 729 aa16.43■□□□□ 0.22
LINC01543-201ENST00000578367 CREB3L3Q68CJ9 461 aa16.43■□□□□ 0.22
LINC01543-201ENST00000578367 SCYL3Q8IZE3 742 aa16.43■□□□□ 0.22
LINC01543-201ENST00000578367 IL27Q8NEV9 243 aa16.43■□□□□ 0.22
LINC01543-201ENST00000578367 MTA3Q9BTC8 594 aa16.43■□□□□ 0.22
LINC01543-201ENST00000578367 KRT23Q9C075 422 aa16.43■□□□□ 0.22
LINC01543-201ENST00000578367 ZNF408Q9H9D4 720 aa16.43■□□□□ 0.22
LINC01543-201ENST00000578367 UPF2Q9HAU5 1272 aaKnown RBP16.43■□□□□ 0.22
LINC01543-201ENST00000578367 CABP5Q9NP86 173 aa16.43■□□□□ 0.22
LINC01543-201ENST00000578367 TLL2Q9Y6L7 1015 aa16.43■□□□□ 0.22
LINC01543-201ENST00000578367 PAPPA2Q9BXP8 1791 aa16.43■□□□□ 0.22
LINC01543-201ENST00000578367 CCDC178Q5BJE1 867 aa16.42■□□□□ 0.22
LINC01543-201ENST00000578367 DLK2Q6UY11 383 aa16.42■□□□□ 0.22
LINC01543-201ENST00000578367 TMEM179Q6ZVK1 233 aa16.42■□□□□ 0.22
LINC01543-201ENST00000578367 SAPCD2Q86UD0 394 aa16.42■□□□□ 0.22
LINC01543-201ENST00000578367 ESR2Q92731 530 aa16.42■□□□□ 0.22
LINC01543-201ENST00000578367 DYNLL2Q96FJ2 89 aa16.42■□□□□ 0.22
LINC01543-201ENST00000578367 PICK1Q9NRD5 415 aa16.42■□□□□ 0.22
LINC01543-201ENST00000578367 NAV1Q8NEY1 1877 aa16.42■□□□□ 0.22
LINC01543-201ENST00000578367 PLIN4Q96Q06 1357 aa16.41■□□□□ 0.22
LINC01543-201ENST00000578367 HMGB1P09429 215 aaKnown RBP16.41■□□□□ 0.22
LINC01543-201ENST00000578367 RASA1P20936 1047 aa16.41■□□□□ 0.22
LINC01543-201ENST00000578367 HAND2P61296 217 aa16.41■□□□□ 0.22
LINC01543-201ENST00000578367 CTDSPL2Q05D32 466 aa16.41■□□□□ 0.22
LINC01543-201ENST00000578367 ABCB5Q2M3G0 1257 aa16.41■□□□□ 0.22
LINC01543-201ENST00000578367 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms