RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-209	ENST00000578329	GUCY1A2	P33402	732 aa		5.52	□□□□□ -1.53
PPP4R1-209	ENST00000578329	ZAP70	P43403	619 aa		5.52	□□□□□ -1.53
PPP4R1-209	ENST00000578329	FXR1	P51114	621 aa	Known RBP eCLIP	5.52	□□□□□ -1.53
PPP4R1-209	ENST00000578329	PPP4C	P60510	307 aa		5.52	□□□□□ -1.53
PPP4R1-209	ENST00000578329	DYNLL1	P63167	89 aa	Known RBP	5.52	□□□□□ -1.53
PPP4R1-209	ENST00000578329	PICALM	Q13492	652 aa		5.52	□□□□□ -1.53
PPP4R1-209	ENST00000578329	DCAF15	Q66K64	600 aa		5.52	□□□□□ -1.53
PPP4R1-209	ENST00000578329	CEP85	Q6P2H3	762 aa		5.52	□□□□□ -1.53
PPP4R1-209	ENST00000578329	PANK1	Q8TE04	598 aa		5.52	□□□□□ -1.53
PPP4R1-209	ENST00000578329	FRAT1	Q92837	279 aa	Predicted RBP	5.52	□□□□□ -1.53
PPP4R1-209	ENST00000578329	ZNF512B	Q96KM6	892 aa	Predicted RBP	5.52	□□□□□ -1.53
PPP4R1-209	ENST00000578329	UNC93B1	Q9H1C4	597 aa		5.52	□□□□□ -1.53
PPP4R1-209	ENST00000578329	TXNRD2	Q9NNW7	524 aa		5.52	□□□□□ -1.53
PPP4R1-209	ENST00000578329	GPR108	Q9NPR9	543 aa		5.52	□□□□□ -1.53
PPP4R1-209	ENST00000578329	ABCF2	Q9UG63	623 aa		5.52	□□□□□ -1.53
PPP4R1-209	ENST00000578329	COLQ	Q9Y215	455 aa	Predicted RBP	5.52	□□□□□ -1.53
PPP4R1-209	ENST00000578329	LAMA3	Q16787	3333 aa		5.52	□□□□□ -1.53
PPP4R1-209	ENST00000578329	TRIM75P	A6NK02	468 aa		5.51	□□□□□ -1.53
PPP4R1-209	ENST00000578329	CNMD	O75829	334 aa		5.51	□□□□□ -1.53
PPP4R1-209	ENST00000578329	CAP2	P40123	477 aa		5.51	□□□□□ -1.53
PPP4R1-209	ENST00000578329	SPP2	Q13103	211 aa		5.51	□□□□□ -1.53
PPP4R1-209	ENST00000578329	MVP	Q14764	893 aa	Known RBP	5.51	□□□□□ -1.53
PPP4R1-209	ENST00000578329	SLC9C1	Q4G0N8	1177 aa		5.51	□□□□□ -1.53
PPP4R1-209	ENST00000578329	SH3D19	Q5HYK7	790 aa		5.51	□□□□□ -1.53
PPP4R1-209	ENST00000578329	KIAA1755	Q5JYT7	1200 aa		5.51	□□□□□ -1.53
PPP4R1-209	ENST00000578329	OTUD7B	Q6GQQ9	843 aa		5.51	□□□□□ -1.53
PPP4R1-209	ENST00000578329	SIAH1	Q8IUQ4	282 aa		5.51	□□□□□ -1.53
PPP4R1-209	ENST00000578329	USP6NL	Q92738	828 aa		5.51	□□□□□ -1.53
PPP4R1-209	ENST00000578329	EDC3	Q96F86	508 aa	Known RBP	5.51	□□□□□ -1.53
PPP4R1-209	ENST00000578329	NEUROD6	Q96NK8	337 aa		5.51	□□□□□ -1.53
PPP4R1-209	ENST00000578329	CCDC8	Q9H0W5	538 aa	Predicted RBP	5.51	□□□□□ -1.53
PPP4R1-209	ENST00000578329	EMILIN3	Q9NT22	766 aa		5.51	□□□□□ -1.53
PPP4R1-209	ENST00000578329	TMOD2	Q9NZR1	351 aa		5.51	□□□□□ -1.53
PPP4R1-209	ENST00000578329	FLT1	P17948	1338 aa		5.5	□□□□□ -1.53
PPP4R1-209	ENST00000578329	TCRBV5S4A2T	A0A5A2	114 aa		5.5	□□□□□ -1.53
PPP4R1-209	ENST00000578329	CCL5	P13501	91 aa		5.5	□□□□□ -1.53
PPP4R1-209	ENST00000578329	GRK4	P32298	578 aa		5.5	□□□□□ -1.53
PPP4R1-209	ENST00000578329	GJA8	P48165	433 aa		5.5	□□□□□ -1.53
PPP4R1-209	ENST00000578329	FLT3LG	P49771	235 aa		5.5	□□□□□ -1.53
PPP4R1-209	ENST00000578329	HMGCS2	P54868	508 aa		5.5	□□□□□ -1.53
PPP4R1-209	ENST00000578329		Q3C1V9	767 aa		5.5	□□□□□ -1.53
PPP4R1-209	ENST00000578329	C20orf194	Q5TEA3	1177 aa		5.5	□□□□□ -1.53
PPP4R1-209	ENST00000578329	ZKSCAN2	Q63HK3	967 aa		5.5	□□□□□ -1.53
PPP4R1-209	ENST00000578329	ERICH6	Q7L0X2	663 aa		5.5	□□□□□ -1.53
PPP4R1-209	ENST00000578329	DZIP1	Q86YF9	867 aa	Known RBP	5.5	□□□□□ -1.53
PPP4R1-209	ENST00000578329	MAPKAPK5	Q8IW41	473 aa		5.5	□□□□□ -1.53
PPP4R1-209	ENST00000578329	ANKRD13C	Q8N6S4	541 aa		5.5	□□□□□ -1.53
PPP4R1-209	ENST00000578329	DIS3L	Q8TF46	1054 aa	Known RBP	5.5	□□□□□ -1.53
PPP4R1-209	ENST00000578329	TGFBRAP1	Q8WUH2	860 aa		5.5	□□□□□ -1.53
PPP4R1-209	ENST00000578329	RIOK1	Q9BRS2	568 aa	Known RBP	5.5	□□□□□ -1.53
PPP4R1-209	ENST00000578329	WDR18	Q9BV38	432 aa		5.5	□□□□□ -1.53
PPP4R1-209	ENST00000578329	CRISPLD2	Q9H0B8	497 aa		5.5	□□□□□ -1.53
PPP4R1-209	ENST00000578329	ASCC2	Q9H1I8	757 aa	Predicted RBP	5.5	□□□□□ -1.53
PPP4R1-209	ENST00000578329	PAK6	Q9NQU5	681 aa	Predicted RBP	5.5	□□□□□ -1.53
PPP4R1-209	ENST00000578329	GNL3L	Q9NVN8	582 aa	Known RBP	5.5	□□□□□ -1.53
PPP4R1-209	ENST00000578329	AATF	Q9NY61	560 aa	Known RBP eCLIP	5.5	□□□□□ -1.53
PPP4R1-209	ENST00000578329	RBPJL	Q9UBG7	517 aa		5.5	□□□□□ -1.53
PPP4R1-209	ENST00000578329	PALD1	Q9ULE6	856 aa		5.5	□□□□□ -1.53
PPP4R1-209	ENST00000578329	AGTPBP1	Q9UPW5	1226 aa		5.5	□□□□□ -1.53
PPP4R1-209	ENST00000578329	AKAP2	Q9Y2D5	859 aa		5.5	□□□□□ -1.53
PPP4R1-209	ENST00000578329	SLC45A1	Q9Y2W3	748 aa		5.5	□□□□□ -1.53
PPP4R1-209	ENST00000578329	MYPN	Q86TC9	1320 aa		5.49	□□□□□ -1.53
PPP4R1-209	ENST00000578329	MYH1	P12882	1939 aa		5.49	□□□□□ -1.53
PPP4R1-209	ENST00000578329		A0A1W2PRG0	241 aa		5.49	□□□□□ -1.53
PPP4R1-209	ENST00000578329	SOX1	O00570	391 aa	Predicted RBP	5.49	□□□□□ -1.53
PPP4R1-209	ENST00000578329	SURF6	O75683	361 aa	Known RBP	5.49	□□□□□ -1.53
PPP4R1-209	ENST00000578329	GDF11	O95390	407 aa		5.49	□□□□□ -1.53
PPP4R1-209	ENST00000578329	GNRH1	P01148	92 aa		5.49	□□□□□ -1.53
PPP4R1-209	ENST00000578329	INHA	P05111	366 aa		5.49	□□□□□ -1.53
PPP4R1-209	ENST00000578329	GJB1	P08034	283 aa		5.49	□□□□□ -1.53
PPP4R1-209	ENST00000578329	CYP2D6	P10635	497 aa		5.49	□□□□□ -1.53
PPP4R1-209	ENST00000578329	SHMT1	P34896	483 aa		5.49	□□□□□ -1.53
PPP4R1-209	ENST00000578329	PLCD1	P51178	756 aa		5.49	□□□□□ -1.53
PPP4R1-209	ENST00000578329	GABPA	Q06546	454 aa		5.49	□□□□□ -1.53
PPP4R1-209	ENST00000578329	IRF5	Q13568	498 aa		5.49	□□□□□ -1.53
PPP4R1-209	ENST00000578329	SLC4A8	Q2Y0W8	1093 aa		5.49	□□□□□ -1.53
PPP4R1-209	ENST00000578329	MAP3K21	Q5TCX8	1036 aa		5.49	□□□□□ -1.53
PPP4R1-209	ENST00000578329	TATDN1	Q6P1N9	297 aa		5.49	□□□□□ -1.53
PPP4R1-209	ENST00000578329	GADL1	Q6ZQY3	521 aa		5.49	□□□□□ -1.53
PPP4R1-209	ENST00000578329	TEX11	Q8IYF3	940 aa		5.49	□□□□□ -1.53
PPP4R1-209	ENST00000578329	ZNF280C	Q8ND82	737 aa		5.49	□□□□□ -1.53
PPP4R1-209	ENST00000578329	ACER1	Q8TDN7	264 aa		5.49	□□□□□ -1.53
PPP4R1-209	ENST00000578329	TRIB2	Q92519	343 aa		5.49	□□□□□ -1.53
PPP4R1-209	ENST00000578329	HOOK2	Q96ED9	719 aa		5.49	□□□□□ -1.53
PPP4R1-209	ENST00000578329	P2RX7	Q99572	595 aa	Known RBP	5.49	□□□□□ -1.53
PPP4R1-209	ENST00000578329	PORCN	Q9H237	461 aa		5.49	□□□□□ -1.53
PPP4R1-209	ENST00000578329	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	5.49	□□□□□ -1.53
PPP4R1-209	ENST00000578329	ZBTB40	Q9NUA8	1239 aa		5.49	□□□□□ -1.53
PPP4R1-209	ENST00000578329	RAI14	Q9P0K7	980 aa		5.49	□□□□□ -1.53
PPP4R1-209	ENST00000578329	RBM27	Q9P2N5	1060 aa	Known RBP	5.49	□□□□□ -1.53
PPP4R1-209	ENST00000578329	MORF4L1	Q9UBU8	362 aa		5.49	□□□□□ -1.53
PPP4R1-209	ENST00000578329	SAP30BP	Q9UHR5	308 aa	Known RBP	5.49	□□□□□ -1.53
PPP4R1-209	ENST00000578329	EXOC6B	Q9Y2D4	811 aa		5.49	□□□□□ -1.53
PPP4R1-209	ENST00000578329	DNAH12	Q6ZR08	3092 aa		5.49	□□□□□ -1.53
PPP4R1-209	ENST00000578329		A0A0G2JMZ2	1700 aa		5.48	□□□□□ -1.53
PPP4R1-209	ENST00000578329	PARP14	Q460N5	1801 aa		5.48	□□□□□ -1.53
PPP4R1-209	ENST00000578329	IPO8	O15397	1037 aa	Known RBP	5.48	□□□□□ -1.53
PPP4R1-209	ENST00000578329	PRKAB2	O43741	272 aa		5.48	□□□□□ -1.53
PPP4R1-209	ENST00000578329	ADCY3	O60266	1144 aa		5.48	□□□□□ -1.53
PPP4R1-209	ENST00000578329	FMNL1	O95466	1100 aa	Predicted RBP	5.48	□□□□□ -1.53

Retrieved 100 of 20,778 RNA–protein pairs in 45 ms