RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 CYP2C8P10632 490 aa13.85□□□□□ -0.19
SMARCE1-214ENST00000578112 METTL16Q86W50 562 aaKnown RBP13.85□□□□□ -0.19
SMARCE1-214ENST00000578112 ZNF280CQ8ND82 737 aa13.85□□□□□ -0.19
SMARCE1-214ENST00000578112 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.85□□□□□ -0.192e-6■■■■■ 27.2
SMARCE1-214ENST00000578112 FLT3LGP49771 235 aa13.85□□□□□ -0.19
SMARCE1-214ENST00000578112 RARSP54136 660 aaKnown RBP13.85□□□□□ -0.19
SMARCE1-214ENST00000578112 GPR153Q6NV75 609 aa13.85□□□□□ -0.19
SMARCE1-214ENST00000578112 SPATA5Q8NB90 893 aa13.85□□□□□ -0.19
SMARCE1-214ENST00000578112 NSUN4Q96CB9 384 aaKnown RBP13.85□□□□□ -0.19
SMARCE1-214ENST00000578112 DDX4Q9NQI0 724 aaKnown RBP13.85□□□□□ -0.19
SMARCE1-214ENST00000578112 ABCF2Q9UG63 623 aa13.85□□□□□ -0.19
SMARCE1-214ENST00000578112 USP17L5A8MUK1 530 aa13.84□□□□□ -0.19
SMARCE1-214ENST00000578112 SRGAP3O43295 1099 aa13.84□□□□□ -0.19
SMARCE1-214ENST00000578112 BAG3O95817 575 aa13.84□□□□□ -0.19
SMARCE1-214ENST00000578112 INHAP05111 366 aa13.84□□□□□ -0.19
SMARCE1-214ENST00000578112 PPP4CP60510 307 aa13.84□□□□□ -0.19
SMARCE1-214ENST00000578112 MEIS3Q99687 375 aa13.84□□□□□ -0.19
SMARCE1-214ENST00000578112 TAOK2Q9UL54 1235 aa13.84□□□□□ -0.19
SMARCE1-214ENST00000578112 C19orf81C9J6K1 198 aa13.83□□□□□ -0.19
SMARCE1-214ENST00000578112 HMGCRP04035 888 aa13.83□□□□□ -0.19
SMARCE1-214ENST00000578112 GNAI2P04899 355 aa13.83□□□□□ -0.19
SMARCE1-214ENST00000578112 CAP2P40123 477 aa13.83□□□□□ -0.19
SMARCE1-214ENST00000578112 TFCP2Q12800 502 aa13.83□□□□□ -0.19
SMARCE1-214ENST00000578112 UNC93B1Q9H1C4 597 aa13.83□□□□□ -0.19
SMARCE1-214ENST00000578112 HMG20BQ9P0W2 317 aa13.83□□□□□ -0.19
SMARCE1-214ENST00000578112 GABRQQ9UN88 632 aa13.83□□□□□ -0.19
SMARCE1-214ENST00000578112 PA2G4Q9UQ80 394 aaKnown RBP13.83□□□□□ -0.19
SMARCE1-214ENST00000578112 HOXA7P31268 230 aaPredicted RBP13.83□□□□□ -0.2
SMARCE1-214ENST00000578112 BMP8BP34820 402 aa13.83□□□□□ -0.2
SMARCE1-214ENST00000578112 FOXP4Q8IVH2 680 aaPredicted RBP13.83□□□□□ -0.2
SMARCE1-214ENST00000578112 PI4KBQ9UBF8 816 aa13.83□□□□□ -0.2
SMARCE1-214ENST00000578112 KIAA0100Q14667 2235 aaKnown RBP13.83□□□□□ -0.2
SMARCE1-214ENST00000578112 TIMM10P62072 90 aa13.82□□□□□ -0.2
SMARCE1-214ENST00000578112 G3BP1Q13283 466 aaKnown RBP eCLIP13.82□□□□□ -0.2
SMARCE1-214ENST00000578112 SOCS4Q8WXH5 440 aa13.82□□□□□ -0.2
SMARCE1-214ENST00000578112 ASNSP08243 561 aa13.82□□□□□ -0.2
SMARCE1-214ENST00000578112 GORABQ5T7V8 394 aa13.82□□□□□ -0.2
SMARCE1-214ENST00000578112 CHRDL2Q6WN34 429 aa13.82□□□□□ -0.2
SMARCE1-214ENST00000578112 RPTORQ8N122 1335 aa13.81□□□□□ -0.2
SMARCE1-214ENST00000578112 SIPA1L1O43166 1804 aa13.81□□□□□ -0.2
SMARCE1-214ENST00000578112 PICALMQ13492 652 aa13.81□□□□□ -0.2
SMARCE1-214ENST00000578112 ATF7IPQ6VMQ6 1270 aa13.81□□□□□ -0.2
SMARCE1-214ENST00000578112 NECAB2Q7Z6G3 386 aa13.81□□□□□ -0.2
SMARCE1-214ENST00000578112 CDCA7LQ96GN5 454 aa13.81□□□□□ -0.2
SMARCE1-214ENST00000578112 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.81□□□□□ -0.2
SMARCE1-214ENST00000578112 TRIM75PA6NK02 468 aa13.81□□□□□ -0.2
SMARCE1-214ENST00000578112 TFRCP02786 760 aaKnown RBP13.81□□□□□ -0.2
SMARCE1-214ENST00000578112 XRCC5P13010 732 aaKnown RBP13.81□□□□□ -0.2
SMARCE1-214ENST00000578112 TEX11Q8IYF3 940 aa13.81□□□□□ -0.2
SMARCE1-214ENST00000578112 TMOD4Q9NZQ9 345 aa13.81□□□□□ -0.2
SMARCE1-214ENST00000578112 EVI5O60447 810 aa13.8□□□□□ -0.2
SMARCE1-214ENST00000578112 CCDC158Q5M9N0 1113 aa13.8□□□□□ -0.2
SMARCE1-214ENST00000578112 ZNF384Q8TF68 577 aa13.8□□□□□ -0.2
SMARCE1-214ENST00000578112 RAI14Q9P0K7 980 aa13.8□□□□□ -0.2
SMARCE1-214ENST00000578112 RBM27Q9P2N5 1060 aaKnown RBP13.8□□□□□ -0.2
SMARCE1-214ENST00000578112 CDK5RAP2Q96SN8 1893 aa13.8□□□□□ -0.2
SMARCE1-214ENST00000578112 PLXNB2O15031 1838 aa13.79□□□□□ -0.2
SMARCE1-214ENST00000578112 MAPK4P31152 587 aa13.79□□□□□ -0.2
SMARCE1-214ENST00000578112 SPP2Q13103 211 aa13.79□□□□□ -0.2
SMARCE1-214ENST00000578112 POLA2Q14181 598 aa13.79□□□□□ -0.2
SMARCE1-214ENST00000578112 ANKRD13CQ8N6S4 541 aa13.79□□□□□ -0.2
SMARCE1-214ENST00000578112 NEUROD6Q96NK8 337 aa13.79□□□□□ -0.2
SMARCE1-214ENST00000578112 HMX1Q9NP08 348 aaPredicted RBP13.79□□□□□ -0.2
SMARCE1-214ENST00000578112 GJD2Q9UKL4 321 aa13.79□□□□□ -0.2
SMARCE1-214ENST00000578112 BACE1P56817 501 aa13.79□□□□□ -0.2
SMARCE1-214ENST00000578112 TREML2Q5T2D2 321 aa13.79□□□□□ -0.2
SMARCE1-214ENST00000578112 NAA16Q6N069 864 aaPredicted RBP13.79□□□□□ -0.2
SMARCE1-214ENST00000578112 ASCC2Q9H1I8 757 aaPredicted RBP13.79□□□□□ -0.2
SMARCE1-214ENST00000578112 LRP2BPQ9P2M1 347 aa13.79□□□□□ -0.2
SMARCE1-214ENST00000578112 MYCP01106 439 aaPredicted RBP13.78□□□□□ -0.2
SMARCE1-214ENST00000578112 MAP3K21Q5TCX8 1036 aa13.78□□□□□ -0.2
SMARCE1-214ENST00000578112 C12orf42Q96LP6 360 aa13.78□□□□□ -0.2
SMARCE1-214ENST00000578112 DEFB118Q96PH6 123 aa13.78□□□□□ -0.2
SMARCE1-214ENST00000578112 OGDHLQ9ULD0 1010 aa13.78□□□□□ -0.2
SMARCE1-214ENST00000578112 HLA-DOAP06340 250 aa13.78□□□□□ -0.2
SMARCE1-214ENST00000578112 MCAMP43121 646 aa13.78□□□□□ -0.2
SMARCE1-214ENST00000578112 IRX3P78415 501 aaPredicted RBP13.78□□□□□ -0.2
SMARCE1-214ENST00000578112 EHD4Q9H223 541 aa13.78□□□□□ -0.2
SMARCE1-214ENST00000578112 ELNP15502 786 aa13.77□□□□□ -0.21
SMARCE1-214ENST00000578112 TTC39AQ5SRH9 613 aa13.77□□□□□ -0.21
SMARCE1-214ENST00000578112 USP17L2Q6R6M4 530 aa13.77□□□□□ -0.21
SMARCE1-214ENST00000578112 SSH3Q8TE77 659 aa13.77□□□□□ -0.21
SMARCE1-214ENST00000578112 TRIM34Q9BYJ4 488 aa13.77□□□□□ -0.21
SMARCE1-214ENST00000578112 NBPF3Q9H094 633 aa13.77□□□□□ -0.21
SMARCE1-214ENST00000578112 RTN4Q9NQC3 1192 aaKnown RBP13.77□□□□□ -0.21
SMARCE1-214ENST00000578112 NOP58Q9Y2X3 529 aaKnown RBP13.77□□□□□ -0.21
SMARCE1-214ENST00000578112 DDX60LQ5H9U9 1706 aaKnown RBP13.76□□□□□ -0.21
SMARCE1-214ENST00000578112 HMGCS2P54868 508 aa13.76□□□□□ -0.21
SMARCE1-214ENST00000578112 GPRC5AQ8NFJ5 357 aa13.76□□□□□ -0.21
SMARCE1-214ENST00000578112 NUDT12Q9BQG2 462 aa13.76□□□□□ -0.21
SMARCE1-214ENST00000578112 ALPK3Q96L96 1907 aa13.76□□□□□ -0.21
SMARCE1-214ENST00000578112 TRIM27P14373 513 aa13.76□□□□□ -0.21
SMARCE1-214ENST00000578112 PDE3AQ14432 1141 aa13.76□□□□□ -0.21
SMARCE1-214ENST00000578112 TNNI3KQ59H18 835 aa13.76□□□□□ -0.21
SMARCE1-214ENST00000578112 C11orf49Q9H6J7 331 aa13.76□□□□□ -0.21
SMARCE1-214ENST00000578112 FPGT-TNNI3KV9GXZ4 949 aa13.76□□□□□ -0.21
SMARCE1-214ENST00000578112 ZNF236Q9UL36 1845 aa13.76□□□□□ -0.21
SMARCE1-214ENST00000578112 FLT1P17948 1338 aa13.76□□□□□ -0.21
SMARCE1-214ENST00000578112 USP17L10C9JJH3 530 aa13.75□□□□□ -0.21
SMARCE1-214ENST00000578112 GLRX3O76003 335 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms