RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 PICALMQ13492 652 aa21.81■■□□□ 1.08
PRKCA-203ENST00000578063 SGMS1Q86VZ5 419 aa21.81■■□□□ 1.08
PRKCA-203ENST00000578063 UBAC1Q9BSL1 405 aa21.81■■□□□ 1.08
PRKCA-203ENST00000578063 KLF18A0A0U1RQI7 1052 aa21.8■■□□□ 1.08
PRKCA-203ENST00000578063 RANBP6O60518 1105 aaKnown RBP21.8■■□□□ 1.08
PRKCA-203ENST00000578063 NPM3O75607 178 aaKnown RBP21.8■■□□□ 1.08
PRKCA-203ENST00000578063 PDIA3P30101 505 aaKnown RBP21.8■■□□□ 1.08
PRKCA-203ENST00000578063 MMP14P50281 582 aa21.8■■□□□ 1.08
PRKCA-203ENST00000578063 EVX2Q03828 476 aa21.8■■□□□ 1.08
PRKCA-203ENST00000578063 SYT17Q9BSW7 474 aa21.8■■□□□ 1.08
PRKCA-203ENST00000578063 IDI2Q9BXS1 227 aa21.8■■□□□ 1.08
PRKCA-203ENST00000578063 LY9Q9HBG7 655 aa21.8■■□□□ 1.08
PRKCA-203ENST00000578063 PRDM1O75626 825 aa21.8■■□□□ 1.08
PRKCA-203ENST00000578063 SLC4A8Q2Y0W8 1093 aa21.8■■□□□ 1.08
PRKCA-203ENST00000578063 TTC6Q86TZ1 520 aa21.8■■□□□ 1.08
PRKCA-203ENST00000578063 IQCA1Q86XH1 822 aa21.8■■□□□ 1.08
PRKCA-203ENST00000578063 TMTC2Q8N394 836 aa21.8■■□□□ 1.08
PRKCA-203ENST00000578063 OSBPL5Q9H0X9 879 aaPredicted RBP21.8■■□□□ 1.08
PRKCA-203ENST00000578063 DDX4Q9NQI0 724 aaKnown RBP21.8■■□□□ 1.08
PRKCA-203ENST00000578063 NAP1L2Q9ULW6 460 aaPredicted RBP21.8■■□□□ 1.08
PRKCA-203ENST00000578063 GOLGA8BA8MQT2 603 aa21.79■■□□□ 1.08
PRKCA-203ENST00000578063 PLCD1P51178 756 aa21.79■■□□□ 1.08
PRKCA-203ENST00000578063 SCRN1Q12765 414 aa21.79■■□□□ 1.08
PRKCA-203ENST00000578063 RAB3GAP1Q15042 981 aa21.79■■□□□ 1.08
PRKCA-203ENST00000578063 C16orf86Q6ZW13 317 aa21.79■■□□□ 1.08
PRKCA-203ENST00000578063 LLPHQ9BRT6 129 aaKnown RBP21.79■■□□□ 1.08
PRKCA-203ENST00000578063 BRPF3Q9ULD4 1205 aa21.79■■□□□ 1.08
PRKCA-203ENST00000578063 ZBTB12Q9Y330 459 aaPredicted RBP21.79■■□□□ 1.08
PRKCA-203ENST00000578063 GOLGB1Q14789 3259 aaKnown RBP21.79■■□□□ 1.08
PRKCA-203ENST00000578063 RPS12P25398 132 aaKnown RBP21.78■■□□□ 1.08
PRKCA-203ENST00000578063 EIF6P56537 245 aaKnown RBP21.78■■□□□ 1.08
PRKCA-203ENST00000578063 WTAPQ15007 396 aa21.78■■□□□ 1.08
PRKCA-203ENST00000578063 NFXL1Q6ZNB6 911 aa21.78■■□□□ 1.08
PRKCA-203ENST00000578063 DYNLL2Q96FJ2 89 aa21.78■■□□□ 1.08
PRKCA-203ENST00000578063 MKNK2Q9HBH9 465 aa21.78■■□□□ 1.08
PRKCA-203ENST00000578063 PCDHAC2Q9Y5I4 1007 aa21.78■■□□□ 1.08
PRKCA-203ENST00000578063 ECM29Q5VYK3 1845 aa21.78■■□□□ 1.08
PRKCA-203ENST00000578063 SPDYE2BA6NHP3 402 aa21.77■■□□□ 1.08
PRKCA-203ENST00000578063 FZD9O00144 591 aa21.77■■□□□ 1.08
PRKCA-203ENST00000578063 SPDYE6P0CI01 402 aa21.77■■□□□ 1.08
PRKCA-203ENST00000578063 ARHGAP27Q6ZUM4 889 aa21.77■■□□□ 1.08
PRKCA-203ENST00000578063 MTMR14Q8NCE2 650 aa21.77■■□□□ 1.08
PRKCA-203ENST00000578063 ZSCAN10Q96SZ4 725 aaPredicted RBP21.77■■□□□ 1.08
PRKCA-203ENST00000578063 TNKSO95271 1327 aa21.77■■□□□ 1.08
PRKCA-203ENST00000578063 MYH1P12882 1939 aa21.77■■□□□ 1.08
PRKCA-203ENST00000578063 CCDC69A6NI79 296 aa21.77■■□□□ 1.08
PRKCA-203ENST00000578063 DHX16O60231 1041 aaKnown RBP21.77■■□□□ 1.08
PRKCA-203ENST00000578063 PRELPP51888 382 aa21.77■■□□□ 1.08
PRKCA-203ENST00000578063 NFIAQ12857 509 aa21.77■■□□□ 1.08
PRKCA-203ENST00000578063 DLGAP5Q15398 846 aa21.77■■□□□ 1.08
PRKCA-203ENST00000578063 APOA5Q6Q788 366 aa21.77■■□□□ 1.08
PRKCA-203ENST00000578063 ZKSCAN3Q9BRR0 538 aa21.77■■□□□ 1.08
PRKCA-203ENST00000578063 TSPY2A6NKD2 308 aa21.76■■□□□ 1.07
PRKCA-203ENST00000578063 HLA-DOAP06340 250 aa21.76■■□□□ 1.07
PRKCA-203ENST00000578063 GJB2P29033 226 aa21.76■■□□□ 1.07
PRKCA-203ENST00000578063 DHX36Q9H2U1 1008 aaKnown RBP21.76■■□□□ 1.07
PRKCA-203ENST00000578063 TMOD2Q9NZR1 351 aa21.76■■□□□ 1.07
PRKCA-203ENST00000578063 SLC12A7Q9Y666 1083 aa21.76■■□□□ 1.07
PRKCA-203ENST00000578063 LMNB1P20700 586 aa21.75■■□□□ 1.07
PRKCA-203ENST00000578063 RCAN1P53805 252 aa21.75■■□□□ 1.07
PRKCA-203ENST00000578063 SEC23AQ15436 765 aa21.75■■□□□ 1.07
PRKCA-203ENST00000578063 SYNE3Q6ZMZ3 975 aa21.75■■□□□ 1.07
PRKCA-203ENST00000578063 PRMT6Q96LA8 375 aaPredicted RBP21.75■■□□□ 1.07
PRKCA-203ENST00000578063 TAOK2Q9UL54 1235 aa21.75■■□□□ 1.07
PRKCA-203ENST00000578063 HPS5Q9UPZ3 1129 aa21.75■■□□□ 1.07
PRKCA-203ENST00000578063 NID2Q14112 1375 aa21.75■■□□□ 1.07
PRKCA-203ENST00000578063 ZBTB43O43298 467 aa21.75■■□□□ 1.07
PRKCA-203ENST00000578063 ENTPD3O75355 529 aa21.75■■□□□ 1.07
PRKCA-203ENST00000578063 PDIA4P13667 645 aaKnown RBP21.75■■□□□ 1.07
PRKCA-203ENST00000578063 CDK8P49336 464 aa21.75■■□□□ 1.07
PRKCA-203ENST00000578063 CCT2P78371 535 aaKnown RBP21.75■■□□□ 1.07
PRKCA-203ENST00000578063 CCDC178Q5BJE1 867 aa21.75■■□□□ 1.07
PRKCA-203ENST00000578063 ZNF444Q8N0Y2 327 aaPredicted RBP21.75■■□□□ 1.07
PRKCA-203ENST00000578063 EHD4Q9H223 541 aa21.75■■□□□ 1.07
PRKCA-203ENST00000578063 TDRD3Q9H7E2 651 aaKnown RBP21.75■■□□□ 1.07
PRKCA-203ENST00000578063 SENP2Q9HC62 589 aa21.75■■□□□ 1.07
PRKCA-203ENST00000578063 SWAP70Q9UH65 585 aa21.75■■□□□ 1.07
PRKCA-203ENST00000578063 COL2A1P02458 1487 aaPredicted RBP21.74■■□□□ 1.07
PRKCA-203ENST00000578063 METAP2P50579 478 aaKnown RBP eCLIP21.74■■□□□ 1.07
PRKCA-203ENST00000578063 HMGN5P82970 282 aaKnown RBP21.74■■□□□ 1.07
PRKCA-203ENST00000578063 GABPAQ06546 454 aa21.74■■□□□ 1.07
PRKCA-203ENST00000578063 ENAHQ8N8S7 591 aaPredicted RBP21.74■■□□□ 1.07
PRKCA-203ENST00000578063 SLC44A5Q8NCS7 719 aa21.74■■□□□ 1.07
PRKCA-203ENST00000578063 FAM198AQ9UFP1 575 aa21.74■■□□□ 1.07
PRKCA-203ENST00000578063 SERPINB13Q9UIV8 391 aa21.74■■□□□ 1.07
PRKCA-203ENST00000578063 RASA1P20936 1047 aa21.73■■□□□ 1.07
PRKCA-203ENST00000578063 PDCP20941 246 aa21.73■■□□□ 1.07
PRKCA-203ENST00000578063 CACNB3P54284 484 aa21.73■■□□□ 1.07
PRKCA-203ENST00000578063 TFAP4Q01664 338 aa21.73■■□□□ 1.07
PRKCA-203ENST00000578063 FAM47AQ5JRC9 791 aa21.73■■□□□ 1.07
PRKCA-203ENST00000578063 NSUN7Q8NE18 718 aaKnown RBP21.73■■□□□ 1.07
PRKCA-203ENST00000578063 SMARCC2Q8TAQ2 1214 aa21.73■■□□□ 1.07
PRKCA-203ENST00000578063 NCOA5Q9HCD5 579 aaKnown RBP21.73■■□□□ 1.07
PRKCA-203ENST00000578063 TSPY3P0CV98 308 aa21.72■■□□□ 1.07
PRKCA-203ENST00000578063 TSPY8P0CW00 308 aa21.72■■□□□ 1.07
PRKCA-203ENST00000578063 ZNF280AP59817 542 aaPredicted RBP21.72■■□□□ 1.07
PRKCA-203ENST00000578063 IFIT1BQ5T764 474 aaKnown RBP21.72■■□□□ 1.07
PRKCA-203ENST00000578063 MICU3Q86XE3 530 aa21.72■■□□□ 1.07
PRKCA-203ENST00000578063 DPF2Q92785 391 aa21.72■■□□□ 1.07
PRKCA-203ENST00000578063 TCP11L1Q9NUJ3 509 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms