RNA–Protein interactions for RNA: ENST00000577824.5

MKS1-206, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-206ENST00000577824 PTH1RQ03431 593 aa15.15■□□□□ 0.02
MKS1-206ENST00000577824 FMR1Q06787 632 aaKnown RBP eCLIP15.15■□□□□ 0.02
MKS1-206ENST00000577824 PRAMEF18Q5VWM3 479 aa15.15■□□□□ 0.02
MKS1-206ENST00000577824 DCAF15Q66K64 600 aa15.15■□□□□ 0.02
MKS1-206ENST00000577824 C16orf86Q6ZW13 317 aa15.15■□□□□ 0.02
MKS1-206ENST00000577824 FOXP4Q8IVH2 680 aaPredicted RBP15.15■□□□□ 0.02
MKS1-206ENST00000577824 ZSCAN29Q8IWY8 852 aaPredicted RBP15.15■□□□□ 0.02
MKS1-206ENST00000577824 AMOTL1Q8IY63 956 aa15.15■□□□□ 0.02
MKS1-206ENST00000577824 ZNF112Q9UJU3 913 aa15.15■□□□□ 0.02
MKS1-206ENST00000577824 UNCXA6NJT0 531 aa15.14■□□□□ 0.01
MKS1-206ENST00000577824 EIF5BO60841 1220 aaKnown RBP15.14■□□□□ 0.01
MKS1-206ENST00000577824 REC8O95072 547 aa15.14■□□□□ 0.01
MKS1-206ENST00000577824 CYP2D6P10635 497 aa15.14■□□□□ 0.01
MKS1-206ENST00000577824 EVX2Q03828 476 aa15.14■□□□□ 0.01
MKS1-206ENST00000577824 PPARAQ07869 468 aa15.14■□□□□ 0.01
MKS1-206ENST00000577824 CST9Q5W186 159 aa15.14■□□□□ 0.01
MKS1-206ENST00000577824 TATDN1Q6P1N9 297 aa15.14■□□□□ 0.01
MKS1-206ENST00000577824 CTNNA3Q9UI47 895 aa15.14■□□□□ 0.01
MKS1-206ENST00000577824 U3KPZ7 1027 aaPredicted RBP15.14■□□□□ 0.01
MKS1-206ENST00000577824 DOCK1Q14185 1865 aa15.14■□□□□ 0.01
MKS1-206ENST00000577824 GREB1LQ9C091 1923 aaPredicted RBP15.13■□□□□ 0.01
MKS1-206ENST00000577824 CYP2D7A0A087X1C5 515 aa15.13■□□□□ 0.01
MKS1-206ENST00000577824 PHF20L1A8MW92 1017 aa15.13■□□□□ 0.01
MKS1-206ENST00000577824 PPP1R12BO60237 982 aaPredicted RBP15.13■□□□□ 0.01
MKS1-206ENST00000577824 CELF2O95319 508 aaKnown RBP15.13■□□□□ 0.01
MKS1-206ENST00000577824 POLR3DP05423 398 aaPredicted RBP15.13■□□□□ 0.01
MKS1-206ENST00000577824 FGRP09769 529 aa15.13■□□□□ 0.01
MKS1-206ENST00000577824 NT5C2P49902 561 aa15.13■□□□□ 0.01
MKS1-206ENST00000577824 KIAA1211Q6ZU35 1233 aa15.13■□□□□ 0.01
MKS1-206ENST00000577824 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.13■□□□□ 0.01
MKS1-206ENST00000577824 KLRG1Q96E93 195 aa15.13■□□□□ 0.01
MKS1-206ENST00000577824 ZNF341Q9BYN7 854 aa15.13■□□□□ 0.01
MKS1-206ENST00000577824 NBPF3Q9H094 633 aa15.13■□□□□ 0.01
MKS1-206ENST00000577824 ANO2Q9NQ90 1003 aa15.13■□□□□ 0.01
MKS1-206ENST00000577824 SWAP70Q9UH65 585 aa15.13■□□□□ 0.01
MKS1-206ENST00000577824 PCP11498 1178 aaKnown RBP15.12■□□□□ 0.01
MKS1-206ENST00000577824 NOL9Q5SY16 702 aaKnown RBP15.12■□□□□ 0.01
MKS1-206ENST00000577824 STAG1Q8WVM7 1258 aa15.12■□□□□ 0.01
MKS1-206ENST00000577824 GBA2Q9HCG7 927 aaPredicted RBP15.12■□□□□ 0.01
MKS1-206ENST00000577824 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.12■□□□□ 0.01
MKS1-206ENST00000577824 RBM8AQ9Y5S9 174 aaKnown RBP15.12■□□□□ 0.01
MKS1-206ENST00000577824 PLIN4Q96Q06 1357 aa15.11■□□□□ 0.01
MKS1-206ENST00000577824 ATAD5Q96QE3 1844 aa15.11■□□□□ 0.01
MKS1-206ENST00000577824 SMIM22K7EJ46 135 aa15.11■□□□□ 0.01
MKS1-206ENST00000577824 USP2O75604 605 aaPredicted RBP15.11■□□□□ 0.01
MKS1-206ENST00000577824 CYP21A2P08686 494 aa15.11■□□□□ 0.01
MKS1-206ENST00000577824 SHMT1P34896 483 aa15.11■□□□□ 0.01
MKS1-206ENST00000577824 NECTIN1Q15223 517 aa15.11■□□□□ 0.01
MKS1-206ENST00000577824 SLC4A8Q2Y0W8 1093 aa15.11■□□□□ 0.01
MKS1-206ENST00000577824 LDLRAD1Q5T700 205 aa15.11■□□□□ 0.01
MKS1-206ENST00000577824 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.11■□□□□ 0.01
MKS1-206ENST00000577824 MYH8P13535 1937 aa15.11■□□□□ 0.01
MKS1-206ENST00000577824 TMEM88BA6NKF7 163 aa15.1■□□□□ 0.01
MKS1-206ENST00000577824 ZNF213O14771 459 aa15.1■□□□□ 0.01
MKS1-206ENST00000577824 SLURP2P0DP57 97 aa15.1■□□□□ 0.01
MKS1-206ENST00000577824 IREB2P48200 963 aaKnown RBP15.1■□□□□ 0.01
MKS1-206ENST00000577824 APLP1P51693 650 aa15.1■□□□□ 0.01
MKS1-206ENST00000577824 IMMTQ16891 758 aaKnown RBP15.1■□□□□ 0.01
MKS1-206ENST00000577824 MIGA2Q7L4E1 593 aa15.1■□□□□ 0.01
MKS1-206ENST00000577824 ARMC9Q7Z3E5 817 aa15.1■□□□□ 0.01
MKS1-206ENST00000577824 TBC1D10CQ8IV04 446 aa15.1■□□□□ 0.01
MKS1-206ENST00000577824 CRACR2BQ8N4Y2 399 aaPredicted RBP15.1■□□□□ 0.01
MKS1-206ENST00000577824 C2orf69Q8N8R5 385 aa15.1■□□□□ 0.01
MKS1-206ENST00000577824 KCNB2Q92953 911 aa15.1■□□□□ 0.01
MKS1-206ENST00000577824 DYNLL2Q96FJ2 89 aa15.1■□□□□ 0.01
MKS1-206ENST00000577824 HHIPL1Q96JK4 782 aa15.1■□□□□ 0.01
MKS1-206ENST00000577824 ZNF287Q9HBT7 754 aa15.1■□□□□ 0.01
MKS1-206ENST00000577824 GINM1Q9NU53 330 aa15.1■□□□□ 0.01
MKS1-206ENST00000577824 TLL2Q9Y6L7 1015 aa15.1■□□□□ 0.01
MKS1-206ENST00000577824 CEP350Q5VT06 3117 aa15.09■□□□□ 0.01
MKS1-206ENST00000577824 FAM196BA6NMK8 535 aa15.09■□□□□ 0.01
MKS1-206ENST00000577824 MINDY4BA8MYZ0 360 aa15.09■□□□□ 0.01
MKS1-206ENST00000577824 ORC4O43929 436 aa15.09■□□□□ 0.01
MKS1-206ENST00000577824 SLC3A2P08195 630 aaKnown RBP15.09■□□□□ 0.01
MKS1-206ENST00000577824 CDK8P49336 464 aa15.09■□□□□ 0.01
MKS1-206ENST00000577824 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.09■□□□□ 0.01
MKS1-206ENST00000577824 SAPCD2Q86UD0 394 aa15.09■□□□□ 0.01
MKS1-206ENST00000577824 ANKRD13AQ8IZ07 590 aa15.09■□□□□ 0.01
MKS1-206ENST00000577824 SLC44A5Q8NCS7 719 aa15.09■□□□□ 0.01
MKS1-206ENST00000577824 WRNIP1Q96S55 665 aa15.09■□□□□ 0.01
MKS1-206ENST00000577824 ZNF408Q9H9D4 720 aa15.09■□□□□ 0.01
MKS1-206ENST00000577824 CREBZFQ9NS37 354 aa15.09■□□□□ 0.01
MKS1-206ENST00000577824 TACC3Q9Y6A5 838 aa15.09■□□□□ 0.01
MKS1-206ENST00000577824 THSD7BQ9C0I4 1608 aa15.08■□□□□ 0
MKS1-206ENST00000577824 CTNND1O60716 968 aaKnown RBP15.08■□□□□ 0
MKS1-206ENST00000577824 RASA1P20936 1047 aa15.08■□□□□ 0
MKS1-206ENST00000577824 HSPA4P34932 840 aa15.08■□□□□ 0
MKS1-206ENST00000577824 CAP2P40123 477 aa15.08■□□□□ 0
MKS1-206ENST00000577824 PDE4BQ07343 736 aa15.08■□□□□ 0
MKS1-206ENST00000577824 RRP1BQ14684 758 aaKnown RBP15.08■□□□□ 0
MKS1-206ENST00000577824 TSGA10IPQ3SY00 556 aa15.08■□□□□ 0
MKS1-206ENST00000577824 AKNAD1Q5T1N1 836 aa15.08■□□□□ 0
MKS1-206ENST00000577824 USP26Q9BXU7 913 aa15.08■□□□□ 0
MKS1-206ENST00000577824 TRIM34Q9BYJ4 488 aa15.08■□□□□ 0
MKS1-206ENST00000577824 RNF41Q9H4P4 317 aaPredicted RBP15.08■□□□□ 0
MKS1-206ENST00000577824 ANGEL1Q9UNK9 670 aaKnown RBP15.08■□□□□ 0
MKS1-206ENST00000577824 FZD1Q9UP38 647 aa15.08■□□□□ 0
MKS1-206ENST00000577824 SNCAIPQ9Y6H5 919 aa15.08■□□□□ 0
MKS1-206ENST00000577824 PHIPQ8WWQ0 1821 aa15.08■□□□□ 0
MKS1-206ENST00000577824 SLC27A2O14975 620 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms