RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 RHBDL3P58872 404 aa17.47■□□□□ 0.39
SMARCD2-205ENST00000577686 TEX11Q8IYF3 940 aa17.47■□□□□ 0.39
SMARCD2-205ENST00000577686 ZNF280CQ8ND82 737 aa17.47■□□□□ 0.39
SMARCD2-205ENST00000577686 NSUN4Q96CB9 384 aaKnown RBP17.47■□□□□ 0.39
SMARCD2-205ENST00000577686 DHX36Q9H2U1 1008 aaKnown RBP17.47■□□□□ 0.39
SMARCD2-205ENST00000577686 GABRQQ9UN88 632 aa17.47■□□□□ 0.39
SMARCD2-205ENST00000577686 USP17L5A8MUK1 530 aa17.46■□□□□ 0.39
SMARCD2-205ENST00000577686 TFRCP02786 760 aaKnown RBP17.46■□□□□ 0.39
SMARCD2-205ENST00000577686 ANKRD13CQ8N6S4 541 aa17.46■□□□□ 0.39
SMARCD2-205ENST00000577686 UNC93B1Q9H1C4 597 aa17.46■□□□□ 0.39
SMARCD2-205ENST00000577686 CCER2I3L3R5 266 aa17.45■□□□□ 0.38
SMARCD2-205ENST00000577686 SPP2Q13103 211 aa17.45■□□□□ 0.38
SMARCD2-205ENST00000577686 OS9Q13438 667 aaPredicted RBP17.45■□□□□ 0.38
SMARCD2-205ENST00000577686 CCDC158Q5M9N0 1113 aa17.45■□□□□ 0.38
SMARCD2-205ENST00000577686 TTC39AQ5SRH9 613 aa17.45■□□□□ 0.38
SMARCD2-205ENST00000577686 ATF7IPQ6VMQ6 1270 aa17.45■□□□□ 0.38
SMARCD2-205ENST00000577686 GINM1Q9NU53 330 aa17.45■□□□□ 0.38
SMARCD2-205ENST00000577686 TMOD4Q9NZQ9 345 aa17.45■□□□□ 0.38
SMARCD2-205ENST00000577686 PI4KBQ9UBF8 816 aa17.45■□□□□ 0.38
SMARCD2-205ENST00000577686 EVI5O60447 810 aa17.44■□□□□ 0.38
SMARCD2-205ENST00000577686 ELNP15502 786 aa17.44■□□□□ 0.38
SMARCD2-205ENST00000577686 CAP2P40123 477 aa17.44■□□□□ 0.38
SMARCD2-205ENST00000577686 IRX3P78415 501 aaPredicted RBP17.44■□□□□ 0.38
SMARCD2-205ENST00000577686 NAA16Q6N069 864 aaPredicted RBP17.44■□□□□ 0.38
SMARCD2-205ENST00000577686 UBE2Q1Q7Z7E8 422 aa17.44■□□□□ 0.38
SMARCD2-205ENST00000577686 CRACR2BQ8N4Y2 399 aaPredicted RBP17.44■□□□□ 0.38
SMARCD2-205ENST00000577686 FRAT1Q92837 279 aaPredicted RBP17.44■□□□□ 0.38
SMARCD2-205ENST00000577686 DEFB118Q96PH6 123 aa17.44■□□□□ 0.38
SMARCD2-205ENST00000577686 A0A1W2PPC1 479 aa17.43■□□□□ 0.38
SMARCD2-205ENST00000577686 HMGCRP04035 888 aa17.43■□□□□ 0.38
SMARCD2-205ENST00000577686 ASNSP08243 561 aa17.43■□□□□ 0.38
SMARCD2-205ENST00000577686 HMGCS2P54868 508 aa17.43■□□□□ 0.38
SMARCD2-205ENST00000577686 CERS3Q8IU89 383 aa17.43■□□□□ 0.38
SMARCD2-205ENST00000577686 GPR108Q9NPR9 543 aa17.43■□□□□ 0.38
SMARCD2-205ENST00000577686 HLA-DOAP06340 250 aa17.42■□□□□ 0.38
SMARCD2-205ENST00000577686 TRIM27P14373 513 aa17.42■□□□□ 0.38
SMARCD2-205ENST00000577686 SH3D19Q5HYK7 790 aa17.42■□□□□ 0.38
SMARCD2-205ENST00000577686 TREML2Q5T2D2 321 aa17.42■□□□□ 0.38
SMARCD2-205ENST00000577686 TBC1D9Q6ZT07 1266 aa17.42■□□□□ 0.38
SMARCD2-205ENST00000577686 ANKLE1Q8NAG6 615 aa17.42■□□□□ 0.38
SMARCD2-205ENST00000577686 GTF3C2Q8WUA4 911 aaPredicted RBP17.42■□□□□ 0.38
SMARCD2-205ENST00000577686 MGAMO43451 1857 aa17.41■□□□□ 0.38
SMARCD2-205ENST00000577686 FAM196BA6NMK8 535 aa17.41■□□□□ 0.38
SMARCD2-205ENST00000577686 ZBTB7BO15156 539 aaPredicted RBP17.41■□□□□ 0.38
SMARCD2-205ENST00000577686 MCAMP43121 646 aa17.41■□□□□ 0.38
SMARCD2-205ENST00000577686 PI16Q6UXB8 463 aa17.41■□□□□ 0.38
SMARCD2-205ENST00000577686 NECAB2Q7Z6G3 386 aa17.41■□□□□ 0.38
SMARCD2-205ENST00000577686 CCDC84Q86UT8 332 aaPredicted RBP17.41■□□□□ 0.38
SMARCD2-205ENST00000577686 CCAR1Q8IX12 1150 aaKnown RBP17.41■□□□□ 0.38
SMARCD2-205ENST00000577686 WDR18Q9BV38 432 aa17.41■□□□□ 0.38
SMARCD2-205ENST00000577686 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.41■□□□□ 0.382e-11■■■■■ 64.9
SMARCD2-205ENST00000577686 PAK6Q9NQU5 681 aaPredicted RBP17.41■□□□□ 0.38
SMARCD2-205ENST00000577686 C19orf81C9J6K1 198 aa17.4■□□□□ 0.38
SMARCD2-205ENST00000577686 PDE3AQ14432 1141 aa17.4■□□□□ 0.38
SMARCD2-205ENST00000577686 ZKSCAN2Q63HK3 967 aa17.4■□□□□ 0.38
SMARCD2-205ENST00000577686 FOXP4Q8IVH2 680 aaPredicted RBP17.4■□□□□ 0.38
SMARCD2-205ENST00000577686 TRMT44Q8IYL2 757 aaKnown RBP17.4■□□□□ 0.38
SMARCD2-205ENST00000577686 SH3RF3Q8TEJ3 882 aaPredicted RBP17.4■□□□□ 0.38
SMARCD2-205ENST00000577686 SOCS4Q8WXH5 440 aa17.4■□□□□ 0.38
SMARCD2-205ENST00000577686 ASCC2Q9H1I8 757 aaPredicted RBP17.4■□□□□ 0.38
SMARCD2-205ENST00000577686 HMX1Q9NP08 348 aaPredicted RBP17.4■□□□□ 0.38
SMARCD2-205ENST00000577686 AATFQ9NY61 560 aaKnown RBP eCLIP17.4■□□□□ 0.38
SMARCD2-205ENST00000577686 RBM27Q9P2N5 1060 aaKnown RBP17.4■□□□□ 0.38
SMARCD2-205ENST00000577686 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.4■□□□□ 0.38
SMARCD2-205ENST00000577686 TNNI3KQ59H18 835 aa17.39■□□□□ 0.37
SMARCD2-205ENST00000577686 ZNF384Q8TF68 577 aa17.39■□□□□ 0.37
SMARCD2-205ENST00000577686 CRISPLD2Q9H0B8 497 aa17.39■□□□□ 0.37
SMARCD2-205ENST00000577686 CWC22Q9HCG8 908 aaKnown RBP17.39■□□□□ 0.37
SMARCD2-205ENST00000577686 MORF4L1Q9UBU8 362 aa17.39■□□□□ 0.37
SMARCD2-205ENST00000577686 FPGT-TNNI3KV9GXZ4 949 aa17.39■□□□□ 0.37
SMARCD2-205ENST00000577686 CENPFP49454 3210 aa17.38■□□□□ 0.37
SMARCD2-205ENST00000577686 LOC285556D6RIA3 1793 aa17.38■□□□□ 0.37
SMARCD2-205ENST00000577686 MAST2Q6P0Q8 1798 aa17.38■□□□□ 0.37
SMARCD2-205ENST00000577686 PNMA6EA0A0J9YXQ4 647 aa17.38■□□□□ 0.37
SMARCD2-205ENST00000577686 USP17L10C9JJH3 530 aa17.38■□□□□ 0.37
SMARCD2-205ENST00000577686 SLURP2P0DP57 97 aa17.38■□□□□ 0.37
SMARCD2-205ENST00000577686 BACE1P56817 501 aa17.38■□□□□ 0.37
SMARCD2-205ENST00000577686 PPP4CP60510 307 aa17.38■□□□□ 0.37
SMARCD2-205ENST00000577686 MTMR2Q13614 643 aa17.38■□□□□ 0.37
SMARCD2-205ENST00000577686 TMED8Q6PL24 325 aaPredicted RBP17.38■□□□□ 0.37
SMARCD2-205ENST00000577686 FTSJ3Q8IY81 847 aaKnown RBP17.38■□□□□ 0.37
SMARCD2-205ENST00000577686 CLUAP1Q96AJ1 413 aa17.38■□□□□ 0.37
SMARCD2-205ENST00000577686 PTPRFP10586 1907 aa17.38■□□□□ 0.37
SMARCD2-205ENST00000577686 RPTORQ8N122 1335 aa17.38■□□□□ 0.37
SMARCD2-205ENST00000577686 PHIPQ8WWQ0 1821 aa17.37■□□□□ 0.37
SMARCD2-205ENST00000577686 MAPK4P31152 587 aa17.37■□□□□ 0.37
SMARCD2-205ENST00000577686 MAPKAPK5Q8IW41 473 aa17.37■□□□□ 0.37
SMARCD2-205ENST00000577686 GPRC5AQ8NFJ5 357 aa17.37■□□□□ 0.37
SMARCD2-205ENST00000577686 TGFBRAP1Q8WUH2 860 aa17.37■□□□□ 0.37
SMARCD2-205ENST00000577686 ZNF512BQ96KM6 892 aaPredicted RBP17.37■□□□□ 0.37
SMARCD2-205ENST00000577686 NUDT12Q9BQG2 462 aa17.37■□□□□ 0.37
SMARCD2-205ENST00000577686 NBPF3Q9H094 633 aa17.37■□□□□ 0.37
SMARCD2-205ENST00000577686 FLT1P17948 1338 aa17.37■□□□□ 0.37
SMARCD2-205ENST00000577686 MKI67P46013 3256 aaKnown RBP17.36■□□□□ 0.37
SMARCD2-205ENST00000577686 SURF6O75683 361 aaKnown RBP17.36■□□□□ 0.37
SMARCD2-205ENST00000577686 HOXA7P31268 230 aaPredicted RBP17.36■□□□□ 0.37
SMARCD2-205ENST00000577686 PAWRQ96IZ0 340 aaKnown RBP17.36■□□□□ 0.37
SMARCD2-205ENST00000577686 SNRKQ9NRH2 765 aa17.36■□□□□ 0.37
SMARCD2-205ENST00000577686 GLRX3O76003 335 aaKnown RBP17.35■□□□□ 0.37
SMARCD2-205ENST00000577686 POLA2Q14181 598 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms