RNA–Protein interactions for RNA: ENST00000577435.5

GGA3-203, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-203ENST00000577435 CCL15Q16663 113 aa16.91■□□□□ 0.3
GGA3-203ENST00000577435 IFFO2Q5TF58 517 aa16.91■□□□□ 0.3
GGA3-203ENST00000577435 RWDD1Q9H446 243 aaPredicted RBP16.91■□□□□ 0.3
GGA3-203ENST00000577435 ZCCHC17Q9NP64 241 aaKnown RBP16.91■□□□□ 0.3
GGA3-203ENST00000577435 GPR25O00155 361 aa16.9■□□□□ 0.3
GGA3-203ENST00000577435 CXCL11O14625 94 aa16.9■□□□□ 0.3
GGA3-203ENST00000577435 PTPRAP18433 802 aa16.9■□□□□ 0.3
GGA3-203ENST00000577435 ANKRD45Q5TZF3 282 aa16.9■□□□□ 0.3
GGA3-203ENST00000577435 ZSCAN25Q6NSZ9 544 aa16.9■□□□□ 0.3
GGA3-203ENST00000577435 R3HDMLQ9H3Y0 253 aa16.9■□□□□ 0.3
GGA3-203ENST00000577435 PICK1Q9NRD5 415 aa16.9■□□□□ 0.3
GGA3-203ENST00000577435 PALD1Q9ULE6 856 aa16.9■□□□□ 0.3
GGA3-203ENST00000577435 SIPA1L1O43166 1804 aa16.9■□□□□ 0.3
GGA3-203ENST00000577435 ERC2O15083 957 aa16.89■□□□□ 0.29
GGA3-203ENST00000577435 USP5P45974 858 aa16.89■□□□□ 0.29
GGA3-203ENST00000577435 SMC5Q8IY18 1101 aa16.89■□□□□ 0.29
GGA3-203ENST00000577435 CRNKL1Q9BZJ0 848 aaKnown RBP16.89■□□□□ 0.29
GGA3-203ENST00000577435 ZBTB47Q9UFB7 747 aaPredicted RBP16.89■□□□□ 0.29
GGA3-203ENST00000577435 SALL3Q9BXA9 1300 aa16.89■□□□□ 0.29
GGA3-203ENST00000577435 DOCK1Q14185 1865 aa16.88■□□□□ 0.29
GGA3-203ENST00000577435 GLRX3O76003 335 aaKnown RBP16.88■□□□□ 0.29
GGA3-203ENST00000577435 HLA-DOAP06340 250 aa16.88■□□□□ 0.29
GGA3-203ENST00000577435 CAP2P40123 477 aa16.88■□□□□ 0.29
GGA3-203ENST00000577435 FAM43AQ8N2R8 423 aa16.88■□□□□ 0.29
GGA3-203ENST00000577435 KBTBD3Q8NAB2 608 aa16.88■□□□□ 0.29
GGA3-203ENST00000577435 ZNF296Q8WUU4 475 aaPredicted RBP16.88■□□□□ 0.29
GGA3-203ENST00000577435 GINM1Q9NU53 330 aa16.88■□□□□ 0.29
GGA3-203ENST00000577435 AFG3L2Q9Y4W6 797 aa16.88■□□□□ 0.29
GGA3-203ENST00000577435 ZHX2Q9Y6X8 837 aa16.88■□□□□ 0.29
GGA3-203ENST00000577435 PHIPQ8WWQ0 1821 aa16.88■□□□□ 0.29
GGA3-203ENST00000577435 FAM196BA6NMK8 535 aa16.87■□□□□ 0.29
GGA3-203ENST00000577435 MX1P20591 662 aa16.87■□□□□ 0.29
GGA3-203ENST00000577435 MOGSQ13724 837 aa16.87■□□□□ 0.29
GGA3-203ENST00000577435 RRP1BQ14684 758 aaKnown RBP16.87■□□□□ 0.29
GGA3-203ENST00000577435 TSHZ3Q63HK5 1081 aa16.87■□□□□ 0.29
GGA3-203ENST00000577435 TTC6Q86TZ1 520 aa16.87■□□□□ 0.29
GGA3-203ENST00000577435 PI4K2BQ8TCG2 481 aa16.87■□□□□ 0.29
GGA3-203ENST00000577435 OTUD7AQ8TE49 926 aaPredicted RBP16.87■□□□□ 0.29
GGA3-203ENST00000577435 TBC1D2Q9BYX2 928 aa16.87■□□□□ 0.29
GGA3-203ENST00000577435 EHD4Q9H223 541 aa16.87■□□□□ 0.29
GGA3-203ENST00000577435 DNAJC18Q9H819 358 aa16.87■□□□□ 0.29
GGA3-203ENST00000577435 STAP2Q9UGK3 403 aa16.87■□□□□ 0.29
GGA3-203ENST00000577435 SAP30BPQ9UHR5 308 aaKnown RBP16.87■□□□□ 0.29
GGA3-203ENST00000577435 BTBD19C9JJ37 291 aa16.86■□□□□ 0.29
GGA3-203ENST00000577435 FKTNO75072 461 aa16.86■□□□□ 0.29
GGA3-203ENST00000577435 CRHR2Q13324 411 aa16.86■□□□□ 0.29
GGA3-203ENST00000577435 ANKRD23Q86SG2 305 aa16.86■□□□□ 0.29
GGA3-203ENST00000577435 LCORLQ8N3X6 602 aa16.86■□□□□ 0.29
GGA3-203ENST00000577435 PTPRFP10586 1907 aa16.86■□□□□ 0.29
GGA3-203ENST00000577435 ATAD5Q96QE3 1844 aa16.85■□□□□ 0.29
GGA3-203ENST00000577435 A0A0G2JLL6 359 aaPredicted RBP16.85■□□□□ 0.29
GGA3-203ENST00000577435 IGHDP01880 384 aa16.85■□□□□ 0.29
GGA3-203ENST00000577435 ZFYP08048 801 aaPredicted RBP16.85■□□□□ 0.29
GGA3-203ENST00000577435 TAF1CQ15572 869 aaPredicted RBP16.85■□□□□ 0.29
GGA3-203ENST00000577435 SLFNL1Q499Z3 407 aa16.85■□□□□ 0.29
GGA3-203ENST00000577435 PRRT2Q7Z6L0 340 aaPredicted RBP16.85■□□□□ 0.29
GGA3-203ENST00000577435 CRACR2BQ8N4Y2 399 aaPredicted RBP16.85■□□□□ 0.29
GGA3-203ENST00000577435 ARMT1Q9H993 441 aa16.85■□□□□ 0.29
GGA3-203ENST00000577435 ZFYVE28Q9HCC9 887 aa16.85■□□□□ 0.29
GGA3-203ENST00000577435 DCP1AQ9NPI6 582 aaPredicted RBP16.85■□□□□ 0.29
GGA3-203ENST00000577435 ATP8A2Q9NTI2 1148 aa16.85■□□□□ 0.29
GGA3-203ENST00000577435 SERPINB13Q9UIV8 391 aa16.85■□□□□ 0.29
GGA3-203ENST00000577435 TAOK2Q9UL54 1235 aa16.85■□□□□ 0.29
GGA3-203ENST00000577435 MBD4O95243 580 aa16.84■□□□□ 0.29
GGA3-203ENST00000577435 CHGBP05060 677 aa16.84■□□□□ 0.29
GGA3-203ENST00000577435 ASNSP08243 561 aa16.84■□□□□ 0.29
GGA3-203ENST00000577435 DGKZQ13574 1117 aa16.84■□□□□ 0.29
GGA3-203ENST00000577435 LRRFIP1Q32MZ4 808 aaKnown RBP16.84■□□□□ 0.29
GGA3-203ENST00000577435 TATDN1Q6P1N9 297 aa16.84■□□□□ 0.29
GGA3-203ENST00000577435 FASTKD5Q7L8L6 764 aaKnown RBP16.84■□□□□ 0.29
GGA3-203ENST00000577435 CTU1Q7Z7A3 348 aaKnown RBP16.84■□□□□ 0.29
GGA3-203ENST00000577435 TRIM34Q9BYJ4 488 aa16.84■□□□□ 0.29
GGA3-203ENST00000577435 PUS7LQ9H0K6 701 aaKnown RBP16.84■□□□□ 0.29
GGA3-203ENST00000577435 USP17L5A8MUK1 530 aa16.83■□□□□ 0.28
GGA3-203ENST00000577435 RNF113AO15541 343 aaKnown RBP16.83■□□□□ 0.28
GGA3-203ENST00000577435 POLR3DP05423 398 aaPredicted RBP16.83■□□□□ 0.28
GGA3-203ENST00000577435 PLCD1P51178 756 aa16.83■□□□□ 0.28
GGA3-203ENST00000577435 PDE1AP54750 535 aa16.83■□□□□ 0.28
GGA3-203ENST00000577435 DDX60LQ5H9U9 1706 aaKnown RBP16.83■□□□□ 0.28
GGA3-203ENST00000577435 GPAT2Q6NUI2 795 aa16.83■□□□□ 0.28
GGA3-203ENST00000577435 APPBP2Q92624 585 aa16.83■□□□□ 0.28
GGA3-203ENST00000577435 WDR18Q9BV38 432 aa16.83■□□□□ 0.28
GGA3-203ENST00000577435 MCOLN1Q9GZU1 580 aa16.83■□□□□ 0.28
GGA3-203ENST00000577435 MCM9Q9NXL9 1143 aa16.83■□□□□ 0.28
GGA3-203ENST00000577435 NAV1Q8NEY1 1877 aa16.82■□□□□ 0.28
GGA3-203ENST00000577435 PDHXO00330 501 aa16.82■□□□□ 0.28
GGA3-203ENST00000577435 PRKAB2O43741 272 aa16.82■□□□□ 0.28
GGA3-203ENST00000577435 TLR2O60603 784 aa16.82■□□□□ 0.28
GGA3-203ENST00000577435 NUCB1Q02818 461 aa16.82■□□□□ 0.28
GGA3-203ENST00000577435 GABPAQ06546 454 aa16.82■□□□□ 0.28
GGA3-203ENST00000577435 PKN2Q16513 984 aaKnown RBP16.82■□□□□ 0.28
GGA3-203ENST00000577435 TICAM2Q86XR7 235 aa16.82■□□□□ 0.28
GGA3-203ENST00000577435 ZNF280CQ8ND82 737 aa16.82■□□□□ 0.28
GGA3-203ENST00000577435 SDR42E1Q8WUS8 393 aa16.82■□□□□ 0.28
GGA3-203ENST00000577435 STRBPQ96SI9 672 aaKnown RBP16.82■□□□□ 0.28
GGA3-203ENST00000577435 AS3MTQ9HBK9 375 aa16.82■□□□□ 0.28
GGA3-203ENST00000577435 SLC45A1Q9Y2W3 748 aa16.82■□□□□ 0.28
GGA3-203ENST00000577435 BAZ2AQ9UIF9 1905 aaKnown RBP16.82■□□□□ 0.28
GGA3-203ENST00000577435 JAG1P78504 1218 aa16.81■□□□□ 0.28
GGA3-203ENST00000577435 SP3Q02447 781 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms