RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 CCDC84Q86UT8 332 aaPredicted RBP12.85□□□□□ -0.35
TVP23B-208ENST00000575261 TEX11Q8IYF3 940 aa12.85□□□□□ -0.35
TVP23B-208ENST00000575261 PROCA1Q8NCQ7 364 aaPredicted RBP12.85□□□□□ -0.35
TVP23B-208ENST00000575261 CLUAP1Q96AJ1 413 aa12.85□□□□□ -0.35
TVP23B-208ENST00000575261 RNF208Q9H0X6 261 aa12.85□□□□□ -0.35
TVP23B-208ENST00000575261 LRP2BPQ9P2M1 347 aa12.85□□□□□ -0.35
TVP23B-208ENST00000575261 GABRQQ9UN88 632 aa12.85□□□□□ -0.35
TVP23B-208ENST00000575261 TNNQ9UQP3 1299 aa12.85□□□□□ -0.35
TVP23B-208ENST00000575261 TRIOBPQ9H2D6 2365 aa12.85□□□□□ -0.35
TVP23B-208ENST00000575261 H0YGN5 161 aa12.84□□□□□ -0.35
TVP23B-208ENST00000575261 BCAR3O75815 825 aa12.84□□□□□ -0.35
TVP23B-208ENST00000575261 FLT3LGP49771 235 aa12.84□□□□□ -0.35
TVP23B-208ENST00000575261 FXR1P51114 621 aaKnown RBP eCLIP12.84□□□□□ -0.35
TVP23B-208ENST00000575261 IRF5Q13568 498 aa12.84□□□□□ -0.35
TVP23B-208ENST00000575261 FAM110CQ1W6H9 321 aa12.84□□□□□ -0.35
TVP23B-208ENST00000575261 TREML2Q5T2D2 321 aa12.84□□□□□ -0.35
TVP23B-208ENST00000575261 ZNF280CQ8ND82 737 aa12.84□□□□□ -0.35
TVP23B-208ENST00000575261 HERC5Q9UII4 1024 aaKnown RBP12.84□□□□□ -0.35
TVP23B-208ENST00000575261 COLQQ9Y215 455 aaPredicted RBP12.84□□□□□ -0.35
TVP23B-208ENST00000575261 SIPA1L1O43166 1804 aa12.83□□□□□ -0.35
TVP23B-208ENST00000575261 FOCADQ5VW36 1801 aa12.83□□□□□ -0.35
TVP23B-208ENST00000575261 ADCY3O60266 1144 aa12.83□□□□□ -0.36
TVP23B-208ENST00000575261 INHAP05111 366 aa12.83□□□□□ -0.36
TVP23B-208ENST00000575261 PLCG2P16885 1265 aa12.83□□□□□ -0.36
TVP23B-208ENST00000575261 PABPC4Q13310 644 aaKnown RBP eCLIP12.83□□□□□ -0.36
TVP23B-208ENST00000575261 TTC39AQ5SRH9 613 aa12.83□□□□□ -0.36
TVP23B-208ENST00000575261 ZKSCAN2Q63HK3 967 aa12.83□□□□□ -0.36
TVP23B-208ENST00000575261 NAA16Q6N069 864 aaPredicted RBP12.83□□□□□ -0.36
TVP23B-208ENST00000575261 UBE2Q1Q7Z7E8 422 aa12.83□□□□□ -0.36
TVP23B-208ENST00000575261 TMEM57Q8N5G2 664 aa12.83□□□□□ -0.36
TVP23B-208ENST00000575261 ANKRD13CQ8N6S4 541 aa12.83□□□□□ -0.36
TVP23B-208ENST00000575261 PXYLP1Q8TE99 480 aa12.83□□□□□ -0.36
TVP23B-208ENST00000575261 U2AF1L4Q8WU68 220 aaKnown RBP12.83□□□□□ -0.36
TVP23B-208ENST00000575261 DPF3Q92784 378 aa12.83□□□□□ -0.36
TVP23B-208ENST00000575261 COA7Q96BR5 231 aa12.83□□□□□ -0.36
TVP23B-208ENST00000575261 HTATIP2Q9BUP3 242 aa12.83□□□□□ -0.36
TVP23B-208ENST00000575261 GPR108Q9NPR9 543 aa12.83□□□□□ -0.36
TVP23B-208ENST00000575261 LAMA3Q16787 3333 aa12.83□□□□□ -0.36
TVP23B-208ENST00000575261 CDK5RAP2Q96SN8 1893 aa12.82□□□□□ -0.36
TVP23B-208ENST00000575261 FARP2O94887 1054 aaPredicted RBP12.82□□□□□ -0.36
TVP23B-208ENST00000575261 BAG3O95817 575 aa12.82□□□□□ -0.36
TVP23B-208ENST00000575261 ELNP15502 786 aa12.82□□□□□ -0.36
TVP23B-208ENST00000575261 CAP2P40123 477 aa12.82□□□□□ -0.36
TVP23B-208ENST00000575261 GCLCP48506 637 aaPredicted RBP12.82□□□□□ -0.36
TVP23B-208ENST00000575261 HMGCS2P54868 508 aa12.82□□□□□ -0.36
TVP23B-208ENST00000575261 SPP2Q13103 211 aa12.82□□□□□ -0.36
TVP23B-208ENST00000575261 OS9Q13438 667 aaPredicted RBP12.82□□□□□ -0.36
TVP23B-208ENST00000575261 TNNI3KQ59H18 835 aa12.82□□□□□ -0.36
TVP23B-208ENST00000575261 CCDC158Q5M9N0 1113 aa12.82□□□□□ -0.36
TVP23B-208ENST00000575261 SH3RF3Q8TEJ3 882 aaPredicted RBP12.82□□□□□ -0.36
TVP23B-208ENST00000575261 UNC93B1Q9H1C4 597 aa12.82□□□□□ -0.36
TVP23B-208ENST00000575261 DHX36Q9H2U1 1008 aaKnown RBP12.82□□□□□ -0.36
TVP23B-208ENST00000575261 AS3MTQ9HBK9 375 aa12.82□□□□□ -0.36
TVP23B-208ENST00000575261 AATFQ9NY61 560 aaKnown RBP eCLIP12.82□□□□□ -0.36
TVP23B-208ENST00000575261 PI4KBQ9UBF8 816 aa12.82□□□□□ -0.36
TVP23B-208ENST00000575261 FPGT-TNNI3KV9GXZ4 949 aa12.82□□□□□ -0.36
TVP23B-208ENST00000575261 USP17L5A8MUK1 530 aa12.81□□□□□ -0.36
TVP23B-208ENST00000575261 IGSF3O75054 1194 aa12.81□□□□□ -0.36
TVP23B-208ENST00000575261 CAPN2P17655 700 aa12.81□□□□□ -0.36
TVP23B-208ENST00000575261 POLA2Q14181 598 aa12.81□□□□□ -0.36
TVP23B-208ENST00000575261 FTSJ3Q8IY81 847 aaKnown RBP12.81□□□□□ -0.36
TVP23B-208ENST00000575261 DBNDD2Q9BQY9 259 aa12.81□□□□□ -0.36
TVP23B-208ENST00000575261 TAOK2Q9UL54 1235 aa12.81□□□□□ -0.36
TVP23B-208ENST00000575261 FLT1P17948 1338 aa12.81□□□□□ -0.36
TVP23B-208ENST00000575261 SGPL1O95470 568 aa12.8□□□□□ -0.36
TVP23B-208ENST00000575261 ASNSP08243 561 aa12.8□□□□□ -0.36
TVP23B-208ENST00000575261 PPP4CP60510 307 aa12.8□□□□□ -0.36
TVP23B-208ENST00000575261 RRP1BQ14684 758 aaKnown RBP12.8□□□□□ -0.36
TVP23B-208ENST00000575261 SH3D19Q5HYK7 790 aa12.8□□□□□ -0.36
TVP23B-208ENST00000575261 CHRDL2Q6WN34 429 aa12.8□□□□□ -0.36
TVP23B-208ENST00000575261 CRACR2BQ8N4Y2 399 aaPredicted RBP12.8□□□□□ -0.36
TVP23B-208ENST00000575261 SSH3Q8TE77 659 aa12.8□□□□□ -0.36
TVP23B-208ENST00000575261 TRIM34Q9BYJ4 488 aa12.8□□□□□ -0.36
TVP23B-208ENST00000575261 ASCC2Q9H1I8 757 aaPredicted RBP12.8□□□□□ -0.36
TVP23B-208ENST00000575261 PAK6Q9NQU5 681 aaPredicted RBP12.8□□□□□ -0.36
TVP23B-208ENST00000575261 SNRKQ9NRH2 765 aa12.8□□□□□ -0.36
TVP23B-208ENST00000575261 DOCK3Q8IZD9 2030 aa12.79□□□□□ -0.36
TVP23B-208ENST00000575261 MYO5AQ9Y4I1 1855 aaKnown RBP12.79□□□□□ -0.36
TVP23B-208ENST00000575261 SURF6O75683 361 aaKnown RBP12.79□□□□□ -0.36
TVP23B-208ENST00000575261 CYP2E1P05181 493 aaPredicted RBP12.79□□□□□ -0.36
TVP23B-208ENST00000575261 MTMR2Q13614 643 aa12.79□□□□□ -0.36
TVP23B-208ENST00000575261 MAPKAPK5Q8IW41 473 aa12.79□□□□□ -0.36
TVP23B-208ENST00000575261 TGFBRAP1Q8WUH2 860 aa12.79□□□□□ -0.36
TVP23B-208ENST00000575261 ZNF512BQ96KM6 892 aaPredicted RBP12.79□□□□□ -0.36
TVP23B-208ENST00000575261 DEFB118Q96PH6 123 aa12.79□□□□□ -0.36
TVP23B-208ENST00000575261 WDR18Q9BV38 432 aa12.79□□□□□ -0.36
TVP23B-208ENST00000575261 C1orf115Q9H7X2 142 aa12.79□□□□□ -0.36
TVP23B-208ENST00000575261 TMOD4Q9NZQ9 345 aa12.79□□□□□ -0.36
TVP23B-208ENST00000575261 NR2E3Q9Y5X4 410 aa12.79□□□□□ -0.36
TVP23B-208ENST00000575261 HMGCRP04035 888 aa12.78□□□□□ -0.36
TVP23B-208ENST00000575261 BACE1P56817 501 aa12.78□□□□□ -0.36
TVP23B-208ENST00000575261 IRX3P78415 501 aaPredicted RBP12.78□□□□□ -0.36
TVP23B-208ENST00000575261 ATP8B2P98198 1209 aa12.78□□□□□ -0.36
TVP23B-208ENST00000575261 ADGRA1Q86SQ6 560 aa12.78□□□□□ -0.36
TVP23B-208ENST00000575261 METTL16Q86W50 562 aaKnown RBP12.78□□□□□ -0.36
TVP23B-208ENST00000575261 ITPRIPQ8IWB1 547 aa12.78□□□□□ -0.36
TVP23B-208ENST00000575261 DNAJC18Q9H819 358 aa12.78□□□□□ -0.36
TVP23B-208ENST00000575261 GINM1Q9NU53 330 aa12.78□□□□□ -0.36
TVP23B-208ENST00000575261 DBNLQ9UJU6 430 aaKnown RBP12.78□□□□□ -0.36
TVP23B-208ENST00000575261 TFRCP02786 760 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms