RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 GRAPLQ8TC17 118 aaPredicted RBP27.45■■□□□ 1.99
NPLOC4-217ENST00000574897 SLC4A8Q2Y0W8 1093 aa27.45■■□□□ 1.98
NPLOC4-217ENST00000574897 NBPF11Q86T75 865 aa27.45■■□□□ 1.98
NPLOC4-217ENST00000574897 KCNJ14Q9UNX9 436 aa27.45■■□□□ 1.98
NPLOC4-217ENST00000574897 STK36Q9NRP7 1315 aa27.45■■□□□ 1.98
NPLOC4-217ENST00000574897 WDHD1O75717 1129 aaPredicted RBP27.44■■□□□ 1.98
NPLOC4-217ENST00000574897 CYP2D6P10635 497 aa27.44■■□□□ 1.98
NPLOC4-217ENST00000574897 ZNF165P49910 485 aa27.44■■□□□ 1.98
NPLOC4-217ENST00000574897 ENAHQ8N8S7 591 aaPredicted RBP27.44■■□□□ 1.98
NPLOC4-217ENST00000574897 AXDND1Q5T1B0 1012 aaPredicted RBP27.44■■□□□ 1.98
NPLOC4-217ENST00000574897 FANCBQ8NB91 859 aa27.44■■□□□ 1.98
NPLOC4-217ENST00000574897 MROH7-TTC4A0A0A0MT08 1334 aa27.44■■□□□ 1.98
NPLOC4-217ENST00000574897 PDS5AQ29RF7 1337 aaKnown RBP27.44■■□□□ 1.98
NPLOC4-217ENST00000574897 BAZ2BQ9UIF8 2168 aaKnown RBP27.44■■□□□ 1.98
NPLOC4-217ENST00000574897 KIAA1551Q9HCM1 1747 aa27.43■■□□□ 1.98
NPLOC4-217ENST00000574897 DLEC1Q9Y238 1755 aa27.43■■□□□ 1.98
NPLOC4-217ENST00000574897 A0A1W2PQ27 194 aa27.43■■□□□ 1.98
NPLOC4-217ENST00000574897 A0A1W2PQ64 194 aa27.43■■□□□ 1.98
NPLOC4-217ENST00000574897 A0A1W2PQD8 194 aa27.43■■□□□ 1.98
NPLOC4-217ENST00000574897 TRIM29Q14134 588 aa27.43■■□□□ 1.98
NPLOC4-217ENST00000574897 CERKQ8TCT0 537 aa27.43■■□□□ 1.98
NPLOC4-217ENST00000574897 TTC12Q9H892 705 aaPredicted RBP27.43■■□□□ 1.98
NPLOC4-217ENST00000574897 DCP1AQ9NPI6 582 aaPredicted RBP27.43■■□□□ 1.98
NPLOC4-217ENST00000574897 GYS1P13807 737 aa27.43■■□□□ 1.98
NPLOC4-217ENST00000574897 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.43■■□□□ 1.98
NPLOC4-217ENST00000574897 ZNF500O60304 480 aaPredicted RBP27.42■■□□□ 1.98
NPLOC4-217ENST00000574897 GRIK5Q16478 980 aa27.42■■□□□ 1.98
NPLOC4-217ENST00000574897 SPC24Q8NBT2 197 aa27.42■■□□□ 1.98
NPLOC4-217ENST00000574897 U2AF2P26368 475 aaKnown RBP eCLIP27.42■■□□□ 1.981e-6■■■□□ 16.9
NPLOC4-217ENST00000574897 CRACR2BQ8N4Y2 399 aaPredicted RBP27.42■■□□□ 1.98
NPLOC4-217ENST00000574897 FBXW7Q969H0 707 aa27.42■■□□□ 1.98
NPLOC4-217ENST00000574897 NAP1L5Q96NT1 182 aaPredicted RBP27.42■■□□□ 1.98
NPLOC4-217ENST00000574897 ZSCAN10Q96SZ4 725 aaPredicted RBP27.42■■□□□ 1.98
NPLOC4-217ENST00000574897 BTBD18B2RXH4 712 aa27.41■■□□□ 1.98
NPLOC4-217ENST00000574897 CTAGE5O15320 804 aa27.41■■□□□ 1.98
NPLOC4-217ENST00000574897 SLC39A14Q15043 492 aa27.41■■□□□ 1.98
NPLOC4-217ENST00000574897 TMTC2Q8N394 836 aa27.41■■□□□ 1.98
NPLOC4-217ENST00000574897 QTRT2Q9H974 415 aaKnown RBP27.41■■□□□ 1.98
NPLOC4-217ENST00000574897 MTA3Q9BTC8 594 aa27.41■■□□□ 1.98
NPLOC4-217ENST00000574897 NMT2O60551 498 aa27.4■■□□□ 1.98
NPLOC4-217ENST00000574897 PTPAQ15257 358 aa27.4■■□□□ 1.98
NPLOC4-217ENST00000574897 MAP3K14Q99558 947 aa27.4■■□□□ 1.98
NPLOC4-217ENST00000574897 DZIP1Q86YF9 867 aaKnown RBP27.4■■□□□ 1.98
NPLOC4-217ENST00000574897 TRIM22Q8IYM9 498 aa27.4■■□□□ 1.98
NPLOC4-217ENST00000574897 RGS22Q8NE09 1264 aa27.4■■□□□ 1.98
NPLOC4-217ENST00000574897 CRNKL1Q9BZJ0 848 aaKnown RBP27.4■■□□□ 1.98
NPLOC4-217ENST00000574897 hCG_1642624A0A1W2PR95 340 aa27.39■■□□□ 1.98
NPLOC4-217ENST00000574897 TDRD7Q8NHU6 1098 aaKnown RBP27.39■■□□□ 1.98
NPLOC4-217ENST00000574897 SDF4Q9BRK5 362 aa27.39■■□□□ 1.98
NPLOC4-217ENST00000574897 TRIM37O94972 964 aa27.38■■□□□ 1.97
NPLOC4-217ENST00000574897 FAM47AQ5JRC9 791 aa27.38■■□□□ 1.97
NPLOC4-217ENST00000574897 SHISA4Q96DD7 197 aa27.38■■□□□ 1.97
NPLOC4-217ENST00000574897 MMP1P03956 469 aa27.38■■□□□ 1.97
NPLOC4-217ENST00000574897 FGRP09769 529 aa27.38■■□□□ 1.97
NPLOC4-217ENST00000574897 PFKFB1P16118 471 aa27.38■■□□□ 1.97
NPLOC4-217ENST00000574897 GPSM2P81274 684 aa27.38■■□□□ 1.97
NPLOC4-217ENST00000574897 DIS3L2Q8IYB7 885 aaKnown RBP27.38■■□□□ 1.97
NPLOC4-217ENST00000574897 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.38■■□□□ 1.97
NPLOC4-217ENST00000574897 XDHP47989 1333 aa27.37■■□□□ 1.97
NPLOC4-217ENST00000574897 SERPINB2P05120 415 aa27.37■■□□□ 1.97
NPLOC4-217ENST00000574897 IQCB1Q15051 598 aa27.37■■□□□ 1.97
NPLOC4-217ENST00000574897 DIXDC1Q155Q3 683 aa27.37■■□□□ 1.97
NPLOC4-217ENST00000574897 STX1AQ16623 288 aa27.37■■□□□ 1.97
NPLOC4-217ENST00000574897 IFIT1BQ5T764 474 aaKnown RBP27.37■■□□□ 1.97
NPLOC4-217ENST00000574897 RPGRQ92834 1020 aaKnown RBP27.37■■□□□ 1.97
NPLOC4-217ENST00000574897 ADRA2BP18089 450 aa27.37■■□□□ 1.97
NPLOC4-217ENST00000574897 CLIC6Q96NY7 704 aa27.37■■□□□ 1.97
NPLOC4-217ENST00000574897 LEMD3Q9Y2U8 911 aa27.37■■□□□ 1.97
NPLOC4-217ENST00000574897 PLEKHA8P1O95397 391 aa27.36■■□□□ 1.97
NPLOC4-217ENST00000574897 DEXIO95424 95 aa27.36■■□□□ 1.97
NPLOC4-217ENST00000574897 USP17L8P0C7I0 530 aa27.36■■□□□ 1.97
NPLOC4-217ENST00000574897 NR5A1Q13285 461 aa27.36■■□□□ 1.97
NPLOC4-217ENST00000574897 WASF1Q92558 559 aa27.36■■□□□ 1.97
NPLOC4-217ENST00000574897 ZNF202O95125 648 aa27.36■■□□□ 1.97
NPLOC4-217ENST00000574897 NOSTRINQ8IVI9 506 aa27.36■■□□□ 1.97
NPLOC4-217ENST00000574897 OXER1Q8TDS5 423 aa27.36■■□□□ 1.97
NPLOC4-217ENST00000574897 CCDC196A0A1B0GTZ2 297 aa27.35■■□□□ 1.97
NPLOC4-217ENST00000574897 TOB1P50616 345 aaPredicted RBP27.35■■□□□ 1.97
NPLOC4-217ENST00000574897 CMA1P23946 247 aa27.35■■□□□ 1.97
NPLOC4-217ENST00000574897 SHC4Q6S5L8 630 aa27.35■■□□□ 1.97
NPLOC4-217ENST00000574897 IQCA1Q86XH1 822 aa27.35■■□□□ 1.97
NPLOC4-217ENST00000574897 ATP8A2Q9NTI2 1148 aa27.35■■□□□ 1.97
NPLOC4-217ENST00000574897 CDK5RAP2Q96SN8 1893 aa27.34■■□□□ 1.97
NPLOC4-217ENST00000574897 LDHBP07195 334 aaKnown RBP27.34■■□□□ 1.97
NPLOC4-217ENST00000574897 DDR1Q08345 913 aa27.34■■□□□ 1.97
NPLOC4-217ENST00000574897 C17orf53Q8N3J3 647 aaPredicted RBP27.34■■□□□ 1.97
NPLOC4-217ENST00000574897 MCM9Q9NXL9 1143 aa27.34■■□□□ 1.97
NPLOC4-217ENST00000574897 OFD1O75665 1012 aa27.34■■□□□ 1.97
NPLOC4-217ENST00000574897 RCAN1P53805 252 aa27.34■■□□□ 1.97
NPLOC4-217ENST00000574897 FUT2Q10981 343 aa27.33■■□□□ 1.97
NPLOC4-217ENST00000574897 TROAPQ12815 778 aa27.33■■□□□ 1.97
NPLOC4-217ENST00000574897 CRY2Q49AN0 593 aa27.33■■□□□ 1.97
NPLOC4-217ENST00000574897 SH3RF3Q8TEJ3 882 aaPredicted RBP27.33■■□□□ 1.97
NPLOC4-217ENST00000574897 SPTY2D1Q68D10 685 aaPredicted RBP27.33■■□□□ 1.96
NPLOC4-217ENST00000574897 CATIPQ7Z7H3 387 aa27.33■■□□□ 1.96
NPLOC4-217ENST00000574897 TRIM5Q9C035 493 aa27.33■■□□□ 1.96
NPLOC4-217ENST00000574897 KCNF1Q9H3M0 494 aa27.33■■□□□ 1.96
NPLOC4-217ENST00000574897 UFL1O94874 794 aa27.32■■□□□ 1.96
NPLOC4-217ENST00000574897 PKN1Q16512 942 aa27.32■■□□□ 1.96
NPLOC4-217ENST00000574897 VPS54Q9P1Q0 977 aa27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms