RNA–Protein interactions for RNA: ENST00000574776.5

CTNS-209, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 4

Gene CTNS, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-209ENST00000574776 AATFQ9NY61 560 aaKnown RBP eCLIP18.68■□□□□ 0.58
CTNS-209ENST00000574776 BIN2Q9UBW5 565 aaPredicted RBP18.68■□□□□ 0.58
CTNS-209ENST00000574776 GABRQQ9UN88 632 aa18.68■□□□□ 0.58
CTNS-209ENST00000574776 DOCK1Q14185 1865 aa18.68■□□□□ 0.58
CTNS-209ENST00000574776 PHIPQ8WWQ0 1821 aa18.67■□□□□ 0.58
CTNS-209ENST00000574776 BAG3O95817 575 aa18.67■□□□□ 0.58
CTNS-209ENST00000574776 CYP2E1P05181 493 aaPredicted RBP18.67■□□□□ 0.58
CTNS-209ENST00000574776 RLBP1P12271 317 aa18.67■□□□□ 0.58
CTNS-209ENST00000574776 SPP2Q13103 211 aa18.67■□□□□ 0.58
CTNS-209ENST00000574776 TREML2Q5T2D2 321 aa18.67■□□□□ 0.58
CTNS-209ENST00000574776 SMCR8Q8TEV9 937 aaPredicted RBP18.67■□□□□ 0.58
CTNS-209ENST00000574776 AGTPBP1Q9UPW5 1226 aa18.67■□□□□ 0.58
CTNS-209ENST00000574776 CAP2P40123 477 aa18.66■□□□□ 0.58
CTNS-209ENST00000574776 ZNF280CQ8ND82 737 aa18.66■□□□□ 0.58
CTNS-209ENST00000574776 TGFBRAP1Q8WUH2 860 aa18.66■□□□□ 0.58
CTNS-209ENST00000574776 CCDC8Q9H0W5 538 aaPredicted RBP18.66■□□□□ 0.58
CTNS-209ENST00000574776 NOP58Q9Y2X3 529 aaKnown RBP18.66■□□□□ 0.58
CTNS-209ENST00000574776 PTPRFP10586 1907 aa18.66■□□□□ 0.58
CTNS-209ENST00000574776 MGAMO43451 1857 aa18.65■□□□□ 0.58
CTNS-209ENST00000574776 CCL5P13501 91 aa18.65■□□□□ 0.58
CTNS-209ENST00000574776 ZAP70P43403 619 aa18.65■□□□□ 0.58
CTNS-209ENST00000574776 PPP4CP60510 307 aa18.65■□□□□ 0.58
CTNS-209ENST00000574776 HABP4Q5JVS0 413 aaKnown RBP18.65■□□□□ 0.58
CTNS-209ENST00000574776 ADGRA1Q86SQ6 560 aa18.65■□□□□ 0.58
CTNS-209ENST00000574776 MAPKAPK5Q8IW41 473 aa18.65■□□□□ 0.58
CTNS-209ENST00000574776 ANKRD13CQ8N6S4 541 aa18.65■□□□□ 0.58
CTNS-209ENST00000574776 PI4KBQ9UBF8 816 aa18.65■□□□□ 0.58
CTNS-209ENST00000574776 COL2A1P02458 1487 aaPredicted RBP18.65■□□□□ 0.58
CTNS-209ENST00000574776 USP17L5A8MUK1 530 aa18.64■□□□□ 0.57
CTNS-209ENST00000574776 PLCG2P16885 1265 aa18.64■□□□□ 0.57
CTNS-209ENST00000574776 FLT3LGP49771 235 aa18.64■□□□□ 0.57
CTNS-209ENST00000574776 UBXN2AP68543 259 aa18.64■□□□□ 0.57
CTNS-209ENST00000574776 PROCA1Q8NCQ7 364 aaPredicted RBP18.64■□□□□ 0.57
CTNS-209ENST00000574776 EAF2Q96CJ1 260 aaPredicted RBP18.64■□□□□ 0.57
CTNS-209ENST00000574776 ZNF512BQ96KM6 892 aaPredicted RBP18.64■□□□□ 0.57
CTNS-209ENST00000574776 RNF208Q9H0X6 261 aa18.64■□□□□ 0.57
CTNS-209ENST00000574776 DHX36Q9H2U1 1008 aaKnown RBP18.64■□□□□ 0.57
CTNS-209ENST00000574776 PIH1D3Q9NQM4 214 aaKnown RBP18.64■□□□□ 0.57
CTNS-209ENST00000574776 PCDH10Q9P2E7 1040 aa18.64■□□□□ 0.57
CTNS-209ENST00000574776 HERC5Q9UII4 1024 aaKnown RBP18.64■□□□□ 0.57
CTNS-209ENST00000574776 DBNLQ9UJU6 430 aaKnown RBP18.64■□□□□ 0.57
CTNS-209ENST00000574776 TNPO2O14787 897 aaKnown RBP18.63■□□□□ 0.57
CTNS-209ENST00000574776 ADCY3O60266 1144 aa18.63■□□□□ 0.57
CTNS-209ENST00000574776 GJB1P08034 283 aa18.63■□□□□ 0.57
CTNS-209ENST00000574776 HMGCS2P54868 508 aa18.63■□□□□ 0.57
CTNS-209ENST00000574776 SLAIN1Q8ND83 568 aa18.63■□□□□ 0.57
CTNS-209ENST00000574776 SHISA4Q96DD7 197 aa18.63■□□□□ 0.57
CTNS-209ENST00000574776 TLR7Q9NYK1 1049 aaKnown RBP18.63■□□□□ 0.57
CTNS-209ENST00000574776 PNMA3Q9UL41 463 aa18.63■□□□□ 0.57
CTNS-209ENST00000574776 CEP290O15078 2479 aa18.63■□□□□ 0.57
CTNS-209ENST00000574776 GJA8P48165 433 aa18.62■□□□□ 0.57
CTNS-209ENST00000574776 DIEXFQ68CQ4 756 aaKnown RBP18.62■□□□□ 0.57
CTNS-209ENST00000574776 FOXP4Q8IVH2 680 aaPredicted RBP18.62■□□□□ 0.57
CTNS-209ENST00000574776 NKX2-3Q8TAU0 364 aa18.62■□□□□ 0.57
CTNS-209ENST00000574776 TBC1D2Q9BYX2 928 aa18.62■□□□□ 0.57
CTNS-209ENST00000574776 PALD1Q9ULE6 856 aa18.62■□□□□ 0.57
CTNS-209ENST00000574776 MYO5AQ9Y4I1 1855 aaKnown RBP18.62■□□□□ 0.57
CTNS-209ENST00000574776 DOCK3Q8IZD9 2030 aa18.61■□□□□ 0.57
CTNS-209ENST00000574776 FLT1P17948 1338 aa18.61■□□□□ 0.57
CTNS-209ENST00000574776 ELNP15502 786 aa18.61■□□□□ 0.57
CTNS-209ENST00000574776 CYP7A1P22680 504 aa18.61■□□□□ 0.57
CTNS-209ENST00000574776 DYNLL1P63167 89 aaKnown RBP18.61■□□□□ 0.57
CTNS-209ENST00000574776 JAG1P78504 1218 aa18.61■□□□□ 0.57
CTNS-209ENST00000574776 UNC93B1Q9H1C4 597 aa18.61■□□□□ 0.57
CTNS-209ENST00000574776 AS3MTQ9HBK9 375 aa18.61■□□□□ 0.57
CTNS-209ENST00000574776 SAP30BPQ9UHR5 308 aaKnown RBP18.61■□□□□ 0.57
CTNS-209ENST00000574776 H0YGN5 161 aa18.6■□□□□ 0.57
CTNS-209ENST00000574776 PABPC4Q13310 644 aaKnown RBP eCLIP18.6■□□□□ 0.57
CTNS-209ENST00000574776 SH3D19Q5HYK7 790 aa18.6■□□□□ 0.57
CTNS-209ENST00000574776 CEP85Q6P2H3 762 aa18.6■□□□□ 0.57
CTNS-209ENST00000574776 CRACR2BQ8N4Y2 399 aaPredicted RBP18.6■□□□□ 0.57
CTNS-209ENST00000574776 PANK1Q8TE04 598 aa18.6■□□□□ 0.57
CTNS-209ENST00000574776 DPF3Q92784 378 aa18.6■□□□□ 0.57
CTNS-209ENST00000574776 COA7Q96BR5 231 aa18.6■□□□□ 0.57
CTNS-209ENST00000574776 TRIM34Q9BYJ4 488 aa18.6■□□□□ 0.57
CTNS-209ENST00000574776 ASCC2Q9H1I8 757 aaPredicted RBP18.6■□□□□ 0.57
CTNS-209ENST00000574776 TAOK2Q9UL54 1235 aa18.6■□□□□ 0.57
CTNS-209ENST00000574776 NDUFB9Q9Y6M9 179 aa18.6■□□□□ 0.57
CTNS-209ENST00000574776 ATAD5Q96QE3 1844 aa18.6■□□□□ 0.57
CTNS-209ENST00000574776 IDH1O75874 414 aaKnown RBP18.59■□□□□ 0.57
CTNS-209ENST00000574776 GCLCP48506 637 aaPredicted RBP18.59■□□□□ 0.57
CTNS-209ENST00000574776 IRF5Q13568 498 aa18.59■□□□□ 0.57
CTNS-209ENST00000574776 FAM110CQ1W6H9 321 aa18.59■□□□□ 0.57
CTNS-209ENST00000574776 SHROOM1Q2M3G4 852 aaPredicted RBP18.59■□□□□ 0.57
CTNS-209ENST00000574776 METTL16Q86W50 562 aaKnown RBP18.59■□□□□ 0.57
CTNS-209ENST00000574776 PXYLP1Q8TE99 480 aa18.59■□□□□ 0.57
CTNS-209ENST00000574776 WDR18Q9BV38 432 aa18.59■□□□□ 0.57
CTNS-209ENST00000574776 DNAJC18Q9H819 358 aa18.59■□□□□ 0.57
CTNS-209ENST00000574776 COLQQ9Y215 455 aaPredicted RBP18.59■□□□□ 0.57
CTNS-209ENST00000574776 EXOC6BQ9Y2D4 811 aa18.59■□□□□ 0.57
CTNS-209ENST00000574776 IGSF3O75054 1194 aa18.58■□□□□ 0.56
CTNS-209ENST00000574776 GDF11O95390 407 aa18.58■□□□□ 0.56
CTNS-209ENST00000574776 INHAP05111 366 aa18.58■□□□□ 0.56
CTNS-209ENST00000574776 ASNSP08243 561 aa18.58■□□□□ 0.56
CTNS-209ENST00000574776 BACE1P56817 501 aa18.58■□□□□ 0.56
CTNS-209ENST00000574776 MTMR2Q13614 643 aa18.58■□□□□ 0.56
CTNS-209ENST00000574776 MIGA1Q8NAN2 632 aa18.58■□□□□ 0.56
CTNS-209ENST00000574776 U2AF1L4Q8WU68 220 aaKnown RBP18.58■□□□□ 0.56
CTNS-209ENST00000574776 ANTXR1Q9H6X2 564 aa18.58■□□□□ 0.56
CTNS-209ENST00000574776 SIPA1L1O43166 1804 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms