RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 AFG3L2Q9Y4W6 797 aa13.83□□□□□ -0.2
RPAIN-214ENST00000574003 FLT1P17948 1338 aa13.83□□□□□ -0.2
RPAIN-214ENST00000574003 PTPRFP10586 1907 aa13.82□□□□□ -0.2
RPAIN-214ENST00000574003 TRIM75PA6NK02 468 aa13.82□□□□□ -0.2
RPAIN-214ENST00000574003 SMARCA5O60264 1052 aaPredicted RBP13.82□□□□□ -0.2
RPAIN-214ENST00000574003 CTNND1O60716 968 aaKnown RBP13.82□□□□□ -0.2
RPAIN-214ENST00000574003 HMMRO75330 724 aa13.82□□□□□ -0.2
RPAIN-214ENST00000574003 BAG3O95817 575 aa13.82□□□□□ -0.2
RPAIN-214ENST00000574003 JAG1P78504 1218 aa13.82□□□□□ -0.2
RPAIN-214ENST00000574003 SLFNL1Q499Z3 407 aa13.82□□□□□ -0.2
RPAIN-214ENST00000574003 KIF1BPQ96EK5 621 aa13.82□□□□□ -0.2
RPAIN-214ENST00000574003 DNAJC2Q99543 621 aaKnown RBP13.82□□□□□ -0.2
RPAIN-214ENST00000574003 DNAJC18Q9H819 358 aa13.82□□□□□ -0.2
RPAIN-214ENST00000574003 A0A0G2JLL6 359 aaPredicted RBP13.81□□□□□ -0.2
RPAIN-214ENST00000574003 CXCL11O14625 94 aa13.81□□□□□ -0.2
RPAIN-214ENST00000574003 TBC1D12O60347 775 aa13.81□□□□□ -0.2
RPAIN-214ENST00000574003 PDE3AQ14432 1141 aa13.81□□□□□ -0.2
RPAIN-214ENST00000574003 HSP90AB4PQ58FF6 505 aa13.81□□□□□ -0.2
RPAIN-214ENST00000574003 C17orf99Q6UX52 265 aa13.81□□□□□ -0.2
RPAIN-214ENST00000574003 PRRT2Q7Z6L0 340 aaPredicted RBP13.81□□□□□ -0.2
RPAIN-214ENST00000574003 CLASRPQ8N2M8 674 aaKnown RBP13.81□□□□□ -0.2
RPAIN-214ENST00000574003 PTCH2Q9Y6C5 1203 aa13.81□□□□□ -0.2
RPAIN-214ENST00000574003 ADGRA2Q96PE1 1338 aa13.81□□□□□ -0.2
RPAIN-214ENST00000574003 PDE4DIPQ5VU43 2346 aa13.81□□□□□ -0.2
RPAIN-214ENST00000574003 ATAD5Q96QE3 1844 aa13.8□□□□□ -0.2
RPAIN-214ENST00000574003 GOLIM4O00461 696 aa13.8□□□□□ -0.2
RPAIN-214ENST00000574003 MAP4K4O95819 1239 aaPredicted RBP13.8□□□□□ -0.2
RPAIN-214ENST00000574003 MYCP01106 439 aaPredicted RBP13.8□□□□□ -0.2
RPAIN-214ENST00000574003 CHGBP05060 677 aa13.8□□□□□ -0.2
RPAIN-214ENST00000574003 IFIT2P09913 472 aaKnown RBP13.8□□□□□ -0.2
RPAIN-214ENST00000574003 CAP2P40123 477 aa13.8□□□□□ -0.2
RPAIN-214ENST00000574003 LACTBP83111 547 aaPredicted RBP13.8□□□□□ -0.2
RPAIN-214ENST00000574003 TREML2Q5T2D2 321 aa13.8□□□□□ -0.2
RPAIN-214ENST00000574003 YTHDC1Q96MU7 727 aaKnown RBP13.8□□□□□ -0.2
RPAIN-214ENST00000574003 ZCCHC17Q9NP64 241 aaKnown RBP13.8□□□□□ -0.2
RPAIN-214ENST00000574003 FOCADQ5VW36 1801 aa13.8□□□□□ -0.2
RPAIN-214ENST00000574003 CENPFP49454 3210 aa13.8□□□□□ -0.2
RPAIN-214ENST00000574003 COL2A1P02458 1487 aaPredicted RBP13.8□□□□□ -0.2
RPAIN-214ENST00000574003 POTEFA5A3E0 1075 aa13.79□□□□□ -0.2
RPAIN-214ENST00000574003 GDF11O95390 407 aa13.79□□□□□ -0.2
RPAIN-214ENST00000574003 PLCG2P16885 1265 aa13.79□□□□□ -0.2
RPAIN-214ENST00000574003 EVX2Q03828 476 aa13.79□□□□□ -0.2
RPAIN-214ENST00000574003 MAP3K12Q12852 859 aa13.79□□□□□ -0.2
RPAIN-214ENST00000574003 SPP2Q13103 211 aa13.79□□□□□ -0.2
RPAIN-214ENST00000574003 BOLA2Q9H3K6 86 aa13.79□□□□□ -0.2
RPAIN-214ENST00000574003 PI4KBQ9UBF8 816 aa13.79□□□□□ -0.2
RPAIN-214ENST00000574003 MYH1P12882 1939 aa13.78□□□□□ -0.2
RPAIN-214ENST00000574003 RAB11FIP3O75154 756 aa13.78□□□□□ -0.2
RPAIN-214ENST00000574003 PDE6AP16499 860 aa13.78□□□□□ -0.2
RPAIN-214ENST00000574003 USP5P45974 858 aa13.78□□□□□ -0.2
RPAIN-214ENST00000574003 TRIM47Q96LD4 638 aa13.78□□□□□ -0.2
RPAIN-214ENST00000574003 BCRP11274 1271 aa13.77□□□□□ -0.21
RPAIN-214ENST00000574003 PSMC4P43686 418 aa13.77□□□□□ -0.21
RPAIN-214ENST00000574003 HMGCS2P54868 508 aa13.77□□□□□ -0.21
RPAIN-214ENST00000574003 FASTKD5Q7L8L6 764 aaKnown RBP13.77□□□□□ -0.21
RPAIN-214ENST00000574003 CRACR2BQ8N4Y2 399 aaPredicted RBP13.77□□□□□ -0.21
RPAIN-214ENST00000574003 SH3TC2Q8TF17 1288 aa13.77□□□□□ -0.21
RPAIN-214ENST00000574003 PARK7Q99497 189 aaKnown RBP13.77□□□□□ -0.21
RPAIN-214ENST00000574003 RIOK1Q9BRS2 568 aaKnown RBP13.77□□□□□ -0.21
RPAIN-214ENST00000574003 DHX36Q9H2U1 1008 aaKnown RBP13.77□□□□□ -0.21
RPAIN-214ENST00000574003 ZNF532Q9HCE3 1301 aa13.77□□□□□ -0.21
RPAIN-214ENST00000574003 HERC5Q9UII4 1024 aaKnown RBP13.77□□□□□ -0.21
RPAIN-214ENST00000574003 TNRC18O15417 2968 aaPredicted RBP13.77□□□□□ -0.21
RPAIN-214ENST00000574003 DOCK3Q8IZD9 2030 aa13.76□□□□□ -0.21
RPAIN-214ENST00000574003 TCRBV5S4A2TA0A5A2 114 aa13.76□□□□□ -0.21
RPAIN-214ENST00000574003 USP17L5A8MUK1 530 aa13.76□□□□□ -0.21
RPAIN-214ENST00000574003 KIF22Q14807 665 aa13.76□□□□□ -0.21
RPAIN-214ENST00000574003 SLC9C2Q5TAH2 1124 aa13.76□□□□□ -0.21
RPAIN-214ENST00000574003 TSHZ3Q63HK5 1081 aa13.76□□□□□ -0.21
RPAIN-214ENST00000574003 ZNF280CQ8ND82 737 aa13.76□□□□□ -0.21
RPAIN-214ENST00000574003 CHMP4BQ9H444 224 aaKnown RBP13.76□□□□□ -0.21
RPAIN-214ENST00000574003 MAGEB6P1A0A0J9YX57 407 aa13.75□□□□□ -0.21
RPAIN-214ENST00000574003 PEX10O60683 326 aa13.75□□□□□ -0.21
RPAIN-214ENST00000574003 FMNL1O95466 1100 aaPredicted RBP13.75□□□□□ -0.21
RPAIN-214ENST00000574003 CYP2D6P10635 497 aa13.75□□□□□ -0.21
RPAIN-214ENST00000574003 OSBPP22059 807 aa13.75□□□□□ -0.21
RPAIN-214ENST00000574003 PLCD1P51178 756 aa13.75□□□□□ -0.21
RPAIN-214ENST00000574003 METTL16Q86W50 562 aaKnown RBP13.75□□□□□ -0.21
RPAIN-214ENST00000574003 FOXP4Q8IVH2 680 aaPredicted RBP13.75□□□□□ -0.21
RPAIN-214ENST00000574003 LCORLQ8N3X6 602 aa13.75□□□□□ -0.21
RPAIN-214ENST00000574003 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.75□□□□□ -0.21
RPAIN-214ENST00000574003 SDR42E1Q8WUS8 393 aa13.75□□□□□ -0.21
RPAIN-214ENST00000574003 ARMC5Q96C12 935 aa13.75□□□□□ -0.21
RPAIN-214ENST00000574003 TRIM34Q9BYJ4 488 aa13.75□□□□□ -0.21
RPAIN-214ENST00000574003 LRRCC1Q9C099 1032 aa13.75□□□□□ -0.21
RPAIN-214ENST00000574003 ARMT1Q9H993 441 aa13.75□□□□□ -0.21
RPAIN-214ENST00000574003 PAG1Q9NWQ8 432 aa13.75□□□□□ -0.21
RPAIN-214ENST00000574003 AGTPBP1Q9UPW5 1226 aa13.75□□□□□ -0.21
RPAIN-214ENST00000574003 PCDHB15Q9Y5E8 787 aa13.75□□□□□ -0.21
RPAIN-214ENST00000574003 SMIM22K7EJ46 135 aa13.74□□□□□ -0.21
RPAIN-214ENST00000574003 PRKAB2O43741 272 aa13.74□□□□□ -0.21
RPAIN-214ENST00000574003 HLA-DOAP06340 250 aa13.74□□□□□ -0.21
RPAIN-214ENST00000574003 ATP5JP18859 108 aa13.74□□□□□ -0.21
RPAIN-214ENST00000574003 EN2P19622 333 aaPredicted RBP13.74□□□□□ -0.21
RPAIN-214ENST00000574003 MTMR2Q13614 643 aa13.74□□□□□ -0.21
RPAIN-214ENST00000574003 TTF1Q15361 905 aaPredicted RBP13.74□□□□□ -0.21
RPAIN-214ENST00000574003 SLC9C1Q4G0N8 1177 aa13.74□□□□□ -0.21
RPAIN-214ENST00000574003 ANKRD13CQ8N6S4 541 aa13.74□□□□□ -0.21
RPAIN-214ENST00000574003 ZNF333Q96JL9 665 aa13.74□□□□□ -0.21
RPAIN-214ENST00000574003 ZBTB21Q9ULJ3 1066 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms