RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 GRIN1Q05586 938 aa17.92■□□□□ 0.46
NUP88-207ENST00000573584 TMCO3Q6UWJ1 677 aa17.92■□□□□ 0.46
NUP88-207ENST00000573584 EPB41L4AQ9HCS5 686 aaPredicted RBP17.92■□□□□ 0.46
NUP88-207ENST00000573584 FMR1Q06787 632 aaKnown RBP eCLIP17.92■□□□□ 0.46
NUP88-207ENST00000573584 SPECC1LQ69YQ0 1117 aa17.92■□□□□ 0.46
NUP88-207ENST00000573584 TRIM22Q8IYM9 498 aa17.92■□□□□ 0.46
NUP88-207ENST00000573584 MLKLQ8NB16 471 aa17.92■□□□□ 0.46
NUP88-207ENST00000573584 DCCP43146 1447 aa17.92■□□□□ 0.46
NUP88-207ENST00000573584 STX10O60499 249 aa17.92■□□□□ 0.46
NUP88-207ENST00000573584 MBD4O95243 580 aa17.92■□□□□ 0.46
NUP88-207ENST00000573584 PTPREP23469 700 aa17.92■□□□□ 0.46
NUP88-207ENST00000573584 GNG11P61952 73 aa17.92■□□□□ 0.46
NUP88-207ENST00000573584 TAF3Q5VWG9 929 aa17.92■□□□□ 0.46
NUP88-207ENST00000573584 CCDC82Q8N4S0 544 aa17.92■□□□□ 0.46
NUP88-207ENST00000573584 SMARCE1Q969G3 411 aa17.92■□□□□ 0.46
NUP88-207ENST00000573584 MPHOSPH8Q99549 860 aa17.92■□□□□ 0.46
NUP88-207ENST00000573584 CARD10Q9BWT7 1032 aa17.92■□□□□ 0.46
NUP88-207ENST00000573584 CNNM2Q9H8M5 875 aa17.92■□□□□ 0.46
NUP88-207ENST00000573584 SERTAD1Q9UHV2 236 aa17.92■□□□□ 0.46
NUP88-207ENST00000573584 TRMT112Q9UI30 125 aaKnown RBP17.92■□□□□ 0.46
NUP88-207ENST00000573584 FBXO2Q9UK22 296 aaPredicted RBP17.92■□□□□ 0.46
NUP88-207ENST00000573584 ADKP55263 362 aaKnown RBP17.91■□□□□ 0.46
NUP88-207ENST00000573584 RILPL1Q5EBL4 403 aa17.91■□□□□ 0.46
NUP88-207ENST00000573584 MAGEB6Q8N7X4 407 aa17.91■□□□□ 0.46
NUP88-207ENST00000573584 HELBQ8NG08 1087 aaPredicted RBP17.91■□□□□ 0.46
NUP88-207ENST00000573584 DACH1Q9UI36 760 aa17.91■□□□□ 0.46
NUP88-207ENST00000573584 PAPPAQ13219 1627 aa17.91■□□□□ 0.46
NUP88-207ENST00000573584 GOLGA6L9A6NEM1 432 aa17.91■□□□□ 0.46
NUP88-207ENST00000573584 PRR29P0C7W0 189 aa17.91■□□□□ 0.46
NUP88-207ENST00000573584 ZNF18P17022 549 aa17.91■□□□□ 0.46
NUP88-207ENST00000573584 CASQ1P31415 396 aa17.91■□□□□ 0.46
NUP88-207ENST00000573584 ZNF827Q17R98 1081 aa17.91■□□□□ 0.46
NUP88-207ENST00000573584 RRP12Q5JTH9 1297 aaKnown RBP17.91■□□□□ 0.46
NUP88-207ENST00000573584 AKNAD1Q5T1N1 836 aa17.91■□□□□ 0.46
NUP88-207ENST00000573584 NT5DC1Q5TFE4 455 aa17.91■□□□□ 0.46
NUP88-207ENST00000573584 MFSD6Q6ZSS7 791 aa17.91■□□□□ 0.46
NUP88-207ENST00000573584 TC2NQ8N9U0 490 aa17.91■□□□□ 0.46
NUP88-207ENST00000573584 ENOX1Q8TC92 643 aaKnown RBP17.91■□□□□ 0.46
NUP88-207ENST00000573584 NOL10Q9BSC4 688 aaKnown RBP17.91■□□□□ 0.46
NUP88-207ENST00000573584 KRT23Q9C075 422 aa17.91■□□□□ 0.46
NUP88-207ENST00000573584 STRN4Q9NRL3 753 aa17.91■□□□□ 0.46
NUP88-207ENST00000573584 TOMM22Q9NS69 142 aa17.91■□□□□ 0.46
NUP88-207ENST00000573584 TACC3Q9Y6A5 838 aa17.91■□□□□ 0.46
NUP88-207ENST00000573584 ZRANB2O95218 330 aaKnown RBP eCLIP17.9■□□□□ 0.46
NUP88-207ENST00000573584 TPM1P09493 284 aa17.9■□□□□ 0.46
NUP88-207ENST00000573584 TRMT44Q8IYL2 757 aaKnown RBP17.9■□□□□ 0.46
NUP88-207ENST00000573584 SPATA5Q8NB90 893 aa17.9■□□□□ 0.46
NUP88-207ENST00000573584 ZKSCAN3Q9BRR0 538 aa17.9■□□□□ 0.46
NUP88-207ENST00000573584 FOXP1Q9H334 677 aaPredicted RBP17.9■□□□□ 0.46
NUP88-207ENST00000573584 ARMT1Q9H993 441 aa17.9■□□□□ 0.46
NUP88-207ENST00000573584 SARSP49591 514 aaKnown RBP17.9■□□□□ 0.46
NUP88-207ENST00000573584 MAP3K12Q12852 859 aa17.9■□□□□ 0.46
NUP88-207ENST00000573584 PUM3Q15397 648 aaKnown RBP17.9■□□□□ 0.46
NUP88-207ENST00000573584 RTN1Q16799 776 aa17.9■□□□□ 0.46
NUP88-207ENST00000573584 GRAMD1CQ8IYS0 662 aa17.9■□□□□ 0.46
NUP88-207ENST00000573584 PIGBQ92521 554 aa17.9■□□□□ 0.46
NUP88-207ENST00000573584 LPIN2Q92539 896 aa17.9■□□□□ 0.46
NUP88-207ENST00000573584 WDR24Q96S15 920 aa17.9■□□□□ 0.46
NUP88-207ENST00000573584 ATP2B1P20020 1258 aa17.89■□□□□ 0.46
NUP88-207ENST00000573584 MORC3Q14149 939 aa17.89■□□□□ 0.46
NUP88-207ENST00000573584 TOGARAM2Q6ZUX3 1019 aa17.89■□□□□ 0.46
NUP88-207ENST00000573584 PCDHB6Q9Y5E3 794 aa17.89■□□□□ 0.46
NUP88-207ENST00000573584 PLA2G4AP47712 749 aa17.89■□□□□ 0.45
NUP88-207ENST00000573584 NR5A1Q13285 461 aa17.89■□□□□ 0.45
NUP88-207ENST00000573584 NUTM2AQ8IVF1 878 aaPredicted RBP17.89■□□□□ 0.45
NUP88-207ENST00000573584 CMTR1Q8N1G2 835 aaKnown RBP17.89■□□□□ 0.45
NUP88-207ENST00000573584 FAM193AP78312 1265 aa17.88■□□□□ 0.45
NUP88-207ENST00000573584 WTAPQ15007 396 aa17.88■□□□□ 0.45
NUP88-207ENST00000573584 SART3Q15020 963 aaKnown RBP17.88■□□□□ 0.45
NUP88-207ENST00000573584 COL5A2P05997 1499 aaPredicted RBP17.88■□□□□ 0.45
NUP88-207ENST00000573584 GSG1L2A8MUP6 293 aa17.88■□□□□ 0.45
NUP88-207ENST00000573584 PDE8AO60658 829 aa17.88■□□□□ 0.45
NUP88-207ENST00000573584 MAP3K9P80192 1104 aa17.88■□□□□ 0.45
NUP88-207ENST00000573584 ZNF579Q8NAF0 562 aaKnown RBP17.88■□□□□ 0.45
NUP88-207ENST00000573584 SAMSN1Q9NSI8 373 aaKnown RBP17.88■□□□□ 0.45
NUP88-207ENST00000573584 PRKAB2O43741 272 aa17.88■□□□□ 0.45
NUP88-207ENST00000573584 DEXIO95424 95 aa17.88■□□□□ 0.45
NUP88-207ENST00000573584 TRIML1Q8N9V2 468 aa17.88■□□□□ 0.45
NUP88-207ENST00000573584 SRPRBQ9Y5M8 271 aaKnown RBP17.88■□□□□ 0.45
NUP88-207ENST00000573584 TDO2P48775 406 aa17.87■□□□□ 0.45
NUP88-207ENST00000573584 EVA1CP58658 441 aa17.87■□□□□ 0.45
NUP88-207ENST00000573584 KANK3Q6NY19 840 aa17.87■□□□□ 0.45
NUP88-207ENST00000573584 CRACR2BQ8N4Y2 399 aaPredicted RBP17.87■□□□□ 0.45
NUP88-207ENST00000573584 MED15Q96RN5 788 aa17.87■□□□□ 0.45
NUP88-207ENST00000573584 EPC1Q9H2F5 836 aa17.87■□□□□ 0.45
NUP88-207ENST00000573584 ERICH2A1L162 156 aa17.87■□□□□ 0.45
NUP88-207ENST00000573584 CCDC66A2RUB6 948 aa17.87■□□□□ 0.45
NUP88-207ENST00000573584 FGFR2P21802 821 aa17.87■□□□□ 0.45
NUP88-207ENST00000573584 RASGRF1Q13972 1273 aa17.87■□□□□ 0.45
NUP88-207ENST00000573584 USP49Q70CQ1 688 aa17.87■□□□□ 0.45
NUP88-207ENST00000573584 RAI14Q9P0K7 980 aa17.87■□□□□ 0.45
NUP88-207ENST00000573584 CEP131Q9UPN4 1083 aa17.87■□□□□ 0.45
NUP88-207ENST00000573584 CCDC196A0A1B0GTZ2 297 aa17.86■□□□□ 0.45
NUP88-207ENST00000573584 ERICH4A6NGS2 130 aa17.86■□□□□ 0.45
NUP88-207ENST00000573584 SEC31AO94979 1220 aaKnown RBP17.86■□□□□ 0.45
NUP88-207ENST00000573584 NR1I3Q14994 352 aa17.86■□□□□ 0.45
NUP88-207ENST00000573584 NUP133Q8WUM0 1156 aa17.86■□□□□ 0.45
NUP88-207ENST00000573584 NACAP1Q9BZK3 213 aa17.86■□□□□ 0.45
NUP88-207ENST00000573584 CABP5Q9NP86 173 aa17.86■□□□□ 0.45
NUP88-207ENST00000573584 MYO5AQ9Y4I1 1855 aaKnown RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms