RNA–Protein interactions for RNA: ENST00000573360.5

TVP23A-207, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 2

Gene TVP23A, Length 3,677 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-207ENST00000573360 TNKSO95271 1327 aa16.24■□□□□ 0.19
TVP23A-207ENST00000573360 BAZ2BQ9UIF8 2168 aaKnown RBP16.23■□□□□ 0.19
TVP23A-207ENST00000573360 TNRC6CQ9HCJ0 1690 aaKnown RBP16.23■□□□□ 0.19
TVP23A-207ENST00000573360 DHX16O60231 1041 aaKnown RBP16.23■□□□□ 0.19
TVP23A-207ENST00000573360 TPM2P07951 284 aa16.23■□□□□ 0.19
TVP23A-207ENST00000573360 GSTO1P78417 241 aa16.23■□□□□ 0.19
TVP23A-207ENST00000573360 ZNF444Q8N0Y2 327 aaPredicted RBP16.23■□□□□ 0.19
TVP23A-207ENST00000573360 CCDC39Q9UFE4 941 aa16.23■□□□□ 0.19
TVP23A-207ENST00000573360 CLRN2A0PK11 232 aa16.23■□□□□ 0.19
TVP23A-207ENST00000573360 USP17L3A6NCW0 530 aa16.23■□□□□ 0.19
TVP23A-207ENST00000573360 USP17L4A6NCW7 530 aa16.23■□□□□ 0.19
TVP23A-207ENST00000573360 F13A1P00488 732 aa16.23■□□□□ 0.19
TVP23A-207ENST00000573360 TFAP4Q01664 338 aa16.23■□□□□ 0.19
TVP23A-207ENST00000573360 IFIT1BQ5T764 474 aaKnown RBP16.23■□□□□ 0.19
TVP23A-207ENST00000573360 USP17L1Q7RTZ2 530 aa16.23■□□□□ 0.19
TVP23A-207ENST00000573360 CLEC10AQ8IUN9 316 aa16.23■□□□□ 0.19
TVP23A-207ENST00000573360 MTMR6Q9Y217 621 aa16.23■□□□□ 0.19
TVP23A-207ENST00000573360 SLC3A2P08195 630 aaKnown RBP16.23■□□□□ 0.19
TVP23A-207ENST00000573360 CPLX2Q6PUV4 134 aaKnown RBP16.23■□□□□ 0.19
TVP23A-207ENST00000573360 COA1Q9GZY4 146 aa16.23■□□□□ 0.19
TVP23A-207ENST00000573360 MYO5AQ9Y4I1 1855 aaKnown RBP16.22■□□□□ 0.19
TVP23A-207ENST00000573360 NSUN7Q8NE18 718 aaKnown RBP16.22■□□□□ 0.19
TVP23A-207ENST00000573360 VEZTQ9HBM0 779 aa16.22■□□□□ 0.19
TVP23A-207ENST00000573360 RRP9O43818 475 aaKnown RBP16.22■□□□□ 0.19
TVP23A-207ENST00000573360 TSPY3P0CV98 308 aa16.22■□□□□ 0.19
TVP23A-207ENST00000573360 TSPY8P0CW00 308 aa16.22■□□□□ 0.19
TVP23A-207ENST00000573360 PDE4BQ07343 736 aa16.22■□□□□ 0.19
TVP23A-207ENST00000573360 APOA5Q6Q788 366 aa16.22■□□□□ 0.19
TVP23A-207ENST00000573360 TAF1LQ8IZX4 1826 aa16.22■□□□□ 0.19
TVP23A-207ENST00000573360 OFD1O75665 1012 aa16.21■□□□□ 0.19
TVP23A-207ENST00000573360 PDCP20941 246 aa16.21■□□□□ 0.19
TVP23A-207ENST00000573360 CDC27P30260 824 aa16.21■□□□□ 0.19
TVP23A-207ENST00000573360 C8orf76Q96K31 380 aa16.21■□□□□ 0.19
TVP23A-207ENST00000573360 VAT1LQ9HCJ6 419 aa16.21■□□□□ 0.19
TVP23A-207ENST00000573360 DAGLAQ9Y4D2 1042 aa16.21■□□□□ 0.19
TVP23A-207ENST00000573360 PFKFB2O60825 505 aa16.21■□□□□ 0.19
TVP23A-207ENST00000573360 CPVLQ9H3G5 476 aa16.21■□□□□ 0.19
TVP23A-207ENST00000573360 CNNM2Q9H8M5 875 aa16.21■□□□□ 0.19
TVP23A-207ENST00000573360 GJA3Q9Y6H8 435 aa16.21■□□□□ 0.19
TVP23A-207ENST00000573360 CTDNEP1O95476 244 aa16.21■□□□□ 0.18
TVP23A-207ENST00000573360 AKAP17AQ02040 695 aaKnown RBP16.21■□□□□ 0.18
TVP23A-207ENST00000573360 KIAA2012Q0VF49 1180 aa16.21■□□□□ 0.18
TVP23A-207ENST00000573360 LY75O60449 1722 aa16.2■□□□□ 0.18
TVP23A-207ENST00000573360 SH2B2O14492 632 aaPredicted RBP16.2■□□□□ 0.18
TVP23A-207ENST00000573360 IARSP41252 1262 aaKnown RBP16.2■□□□□ 0.18
TVP23A-207ENST00000573360 NFIAQ12857 509 aa16.2■□□□□ 0.18
TVP23A-207ENST00000573360 RASGRP2Q7LDG7 609 aa16.2■□□□□ 0.18
TVP23A-207ENST00000573360 CRACR2BQ8N4Y2 399 aaPredicted RBP16.2■□□□□ 0.18
TVP23A-207ENST00000573360 NOL7Q9UMY1 257 aaKnown RBP16.2■□□□□ 0.18
TVP23A-207ENST00000573360 ZKSCAN5Q9Y2L8 839 aa16.2■□□□□ 0.18
TVP23A-207ENST00000573360 MROH7-TTC4A0A0A0MT08 1334 aa16.2■□□□□ 0.18
TVP23A-207ENST00000573360 C4AP0C0L4 1744 aa16.2■□□□□ 0.18
TVP23A-207ENST00000573360 UQCRHLA0A096LP55 91 aa16.2■□□□□ 0.18
TVP23A-207ENST00000573360 UQCRHP07919 91 aa16.2■□□□□ 0.18
TVP23A-207ENST00000573360 GOLGA8HP0CJ92 632 aa16.2■□□□□ 0.18
TVP23A-207ENST00000573360 TBC1D22AQ8WUA7 517 aa16.2■□□□□ 0.18
TVP23A-207ENST00000573360 TRIM34Q9BYJ4 488 aa16.2■□□□□ 0.18
TVP23A-207ENST00000573360 TDRD3Q9H7E2 651 aaKnown RBP16.2■□□□□ 0.18
TVP23A-207ENST00000573360 RTN1Q16799 776 aa16.19■□□□□ 0.18
TVP23A-207ENST00000573360 TEKT1Q969V4 418 aa16.19■□□□□ 0.18
TVP23A-207ENST00000573360 SCN7AQ01118 1682 aa16.19■□□□□ 0.18
TVP23A-207ENST00000573360 GIMAP6Q6P9H5 292 aa16.19■□□□□ 0.18
TVP23A-207ENST00000573360 ALG1Q9BT22 464 aa16.19■□□□□ 0.18
TVP23A-207ENST00000573360 LY9Q9HBG7 655 aa16.19■□□□□ 0.18
TVP23A-207ENST00000573360 PODXL2Q9NZ53 605 aa16.19■□□□□ 0.18
TVP23A-207ENST00000573360 UBR3Q6ZT12 1888 aa16.19■□□□□ 0.18
TVP23A-207ENST00000573360 KCNJ14Q9UNX9 436 aa16.18■□□□□ 0.18
TVP23A-207ENST00000573360 TCP10L2B9ZVM9 353 aa16.18■□□□□ 0.18
TVP23A-207ENST00000573360 IL1R1P14778 569 aa16.18■□□□□ 0.18
TVP23A-207ENST00000573360 ZNF654Q8IZM8 581 aa16.18■□□□□ 0.18
TVP23A-207ENST00000573360 BICD2Q8TD16 824 aa16.18■□□□□ 0.18
TVP23A-207ENST00000573360 IGDCC4Q8TDY8 1250 aa16.18■□□□□ 0.18
TVP23A-207ENST00000573360 ATP8A2Q9NTI2 1148 aa16.18■□□□□ 0.18
TVP23A-207ENST00000573360 KIF3AQ9Y496 699 aa16.18■□□□□ 0.18
TVP23A-207ENST00000573360 ATP6V1DQ9Y5K8 247 aa16.18■□□□□ 0.18
TVP23A-207ENST00000573360 AKAP11Q9UKA4 1901 aa16.18■□□□□ 0.18
TVP23A-207ENST00000573360 KLRG2A4D1S0 409 aaPredicted RBP16.18■□□□□ 0.18
TVP23A-207ENST00000573360 HOMER1Q86YM7 354 aa16.18■□□□□ 0.18
TVP23A-207ENST00000573360 RTFDC1Q9BY42 306 aaPredicted RBP16.18■□□□□ 0.18
TVP23A-207ENST00000573360 TRIM29Q14134 588 aa16.17■□□□□ 0.18
TVP23A-207ENST00000573360 SF3A1Q15459 793 aaKnown RBP16.17■□□□□ 0.18
TVP23A-207ENST00000573360 TMC4Q7Z404 712 aa16.17■□□□□ 0.18
TVP23A-207ENST00000573360 CATIPQ7Z7H3 387 aa16.17■□□□□ 0.18
TVP23A-207ENST00000573360 SLF2Q8IX21 1173 aa16.17■□□□□ 0.18
TVP23A-207ENST00000573360 ENAHQ8N8S7 591 aaPredicted RBP16.17■□□□□ 0.18
TVP23A-207ENST00000573360 ZSCAN10Q96SZ4 725 aaPredicted RBP16.17■□□□□ 0.18
TVP23A-207ENST00000573360 HPS5Q9UPZ3 1129 aa16.17■□□□□ 0.18
TVP23A-207ENST00000573360 PIM2Q9P1W9 311 aa16.17■□□□□ 0.18
TVP23A-207ENST00000573360 CRKP46108 304 aa16.17■□□□□ 0.18
TVP23A-207ENST00000573360 CAMK4Q16566 473 aa16.17■□□□□ 0.18
TVP23A-207ENST00000573360 CCDC93Q567U6 631 aa16.17■□□□□ 0.18
TVP23A-207ENST00000573360 ZFPM1Q8IX07 1006 aa16.17■□□□□ 0.18
TVP23A-207ENST00000573360 SPC24Q8NBT2 197 aa16.17■□□□□ 0.18
TVP23A-207ENST00000573360 STAG1Q8WVM7 1258 aa16.17■□□□□ 0.18
TVP23A-207ENST00000573360 ZNF274Q96GC6 653 aaPredicted RBP16.17■□□□□ 0.18
TVP23A-207ENST00000573360 TMEM87BQ96K49 555 aa16.17■□□□□ 0.18
TVP23A-207ENST00000573360 BCORQ6W2J9 1755 aa16.17■□□□□ 0.18
TVP23A-207ENST00000573360 ALX1Q15699 326 aa16.16■□□□□ 0.18
TVP23A-207ENST00000573360 GUCY1A2P33402 732 aa16.16■□□□□ 0.18
TVP23A-207ENST00000573360 STYK1Q6J9G0 422 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms