RNA–Protein interactions for RNA: ENST00000572844.1

POLR2A-201, Transcript of RNA polymerase II subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2A, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-201ENST00000572844 SDF4Q9BRK5 362 aa18.86■□□□□ 0.61
POLR2A-201ENST00000572844 GOLGA6L19H0YKK7 550 aa18.85■□□□□ 0.61
POLR2A-201ENST00000572844 C11orf57Q6ZUT1 292 aaPredicted RBP18.85■□□□□ 0.61
POLR2A-201ENST00000572844 NAT10Q9H0A0 1025 aaKnown RBP18.85■□□□□ 0.61
POLR2A-201ENST00000572844 TTC12Q9H892 705 aaPredicted RBP18.85■□□□□ 0.61
POLR2A-201ENST00000572844 KIAA1468Q9P260 1216 aa18.85■□□□□ 0.61
POLR2A-201ENST00000572844 MMP1P03956 469 aa18.85■□□□□ 0.61
POLR2A-201ENST00000572844 SAFBQ15424 915 aaKnown RBP eCLIP18.85■□□□□ 0.61
POLR2A-201ENST00000572844 SMIM5Q71RC9 77 aa18.85■□□□□ 0.61
POLR2A-201ENST00000572844 CEP57L1Q8IYX8 460 aa18.85■□□□□ 0.61
POLR2A-201ENST00000572844 BPIFA3Q9BQP9 254 aa18.85■□□□□ 0.61
POLR2A-201ENST00000572844 FOXP1Q9H334 677 aaPredicted RBP18.85■□□□□ 0.61
POLR2A-201ENST00000572844 SPTLC3Q9NUV7 552 aa18.85■□□□□ 0.61
POLR2A-201ENST00000572844 TNKSO95271 1327 aa18.84■□□□□ 0.61
POLR2A-201ENST00000572844 ZNF202O95125 648 aa18.84■□□□□ 0.61
POLR2A-201ENST00000572844 NT5C2P49902 561 aa18.84■□□□□ 0.61
POLR2A-201ENST00000572844 DYNLL1P63167 89 aaKnown RBP18.84■□□□□ 0.61
POLR2A-201ENST00000572844 ZNF830Q96NB3 372 aaPredicted RBP18.84■□□□□ 0.61
POLR2A-201ENST00000572844 ZKSCAN3Q9BRR0 538 aa18.84■□□□□ 0.61
POLR2A-201ENST00000572844 RNF26Q9BY78 433 aaPredicted RBP18.84■□□□□ 0.61
POLR2A-201ENST00000572844 TRIM5Q9C035 493 aa18.84■□□□□ 0.61
POLR2A-201ENST00000572844 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.84■□□□□ 0.61
POLR2A-201ENST00000572844 HPSEQ9Y251 543 aa18.84■□□□□ 0.61
POLR2A-201ENST00000572844 ORC4O43929 436 aa18.83■□□□□ 0.61
POLR2A-201ENST00000572844 ONECUT3O60422 494 aaPredicted RBP18.83■□□□□ 0.61
POLR2A-201ENST00000572844 CUTAO60888 179 aa18.83■□□□□ 0.61
POLR2A-201ENST00000572844 WDHD1O75717 1129 aaPredicted RBP18.83■□□□□ 0.61
POLR2A-201ENST00000572844 PFKFB1P16118 471 aa18.83■□□□□ 0.61
POLR2A-201ENST00000572844 KLRK1P26718 216 aa18.83■□□□□ 0.61
POLR2A-201ENST00000572844 HSPA1LP34931 641 aa18.83■□□□□ 0.61
POLR2A-201ENST00000572844 RBM6P78332 1123 aaKnown RBP18.83■□□□□ 0.61
POLR2A-201ENST00000572844 MECOMQ03112 1051 aa18.83■□□□□ 0.61
POLR2A-201ENST00000572844 NOSTRINQ8IVI9 506 aa18.83■□□□□ 0.61
POLR2A-201ENST00000572844 ZSCAN10Q96SZ4 725 aaPredicted RBP18.83■□□□□ 0.61
POLR2A-201ENST00000572844 ATP8A2Q9NTI2 1148 aa18.83■□□□□ 0.61
POLR2A-201ENST00000572844 ADRA2BP18089 450 aa18.83■□□□□ 0.6
POLR2A-201ENST00000572844 NOLC1Q14978 699 aaKnown RBP eCLIP18.83■□□□□ 0.6
POLR2A-201ENST00000572844 TRAPPC3LQ5T215 181 aa18.83■□□□□ 0.6
POLR2A-201ENST00000572844 SPTY2D1Q68D10 685 aaPredicted RBP18.83■□□□□ 0.6
POLR2A-201ENST00000572844 CTR9Q6PD62 1173 aa18.83■□□□□ 0.6
POLR2A-201ENST00000572844 MRFAP1L1Q96HT8 127 aa18.83■□□□□ 0.6
POLR2A-201ENST00000572844 GJD4Q96KN9 370 aaPredicted RBP18.83■□□□□ 0.6
POLR2A-201ENST00000572844 CRNKL1Q9BZJ0 848 aaKnown RBP18.83■□□□□ 0.6
POLR2A-201ENST00000572844 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.83■□□□□ 0.68e-7■■■□□ 15.1
POLR2A-201ENST00000572844 UBR3Q6ZT12 1888 aa18.82■□□□□ 0.6
POLR2A-201ENST00000572844 CALM1P0DP23 149 aa18.82■□□□□ 0.6
POLR2A-201ENST00000572844 CALM2P0DP24 149 aa18.82■□□□□ 0.6
POLR2A-201ENST00000572844 CALM3P0DP25 149 aa18.82■□□□□ 0.6
POLR2A-201ENST00000572844 RFC4P35249 363 aa18.82■□□□□ 0.6
POLR2A-201ENST00000572844 SBK1Q52WX2 424 aa18.82■□□□□ 0.6
POLR2A-201ENST00000572844 LEMD3Q9Y2U8 911 aa18.82■□□□□ 0.6
POLR2A-201ENST00000572844 MORC2Q9Y6X9 1032 aaPredicted RBP18.82■□□□□ 0.6
POLR2A-201ENST00000572844 SLC3A2P08195 630 aaKnown RBP18.81■□□□□ 0.6
POLR2A-201ENST00000572844 RESP18Q5W5W9 173 aa18.81■□□□□ 0.6
POLR2A-201ENST00000572844 IQCA1Q86XH1 822 aa18.81■□□□□ 0.6
POLR2A-201ENST00000572844 DHX40Q8IX18 779 aaKnown RBP18.81■□□□□ 0.6
POLR2A-201ENST00000572844 ELOA2Q8IYF1 753 aaPredicted RBP18.81■□□□□ 0.6
POLR2A-201ENST00000572844 ENAHQ8N8S7 591 aaPredicted RBP18.81■□□□□ 0.6
POLR2A-201ENST00000572844 KIAA1524Q8TCG1 905 aa18.81■□□□□ 0.6
POLR2A-201ENST00000572844 KCNF1Q9H3M0 494 aa18.81■□□□□ 0.6
POLR2A-201ENST00000572844 RBM28Q9NW13 759 aaKnown RBP18.81■□□□□ 0.6
POLR2A-201ENST00000572844 BECN2A8MW95 431 aa18.81■□□□□ 0.6
POLR2A-201ENST00000572844 GUCY1A2P33402 732 aa18.81■□□□□ 0.6
POLR2A-201ENST00000572844 GRAPQ13588 217 aa18.81■□□□□ 0.6
POLR2A-201ENST00000572844 RILPL1Q5EBL4 403 aa18.81■□□□□ 0.6
POLR2A-201ENST00000572844 C15orf52Q6ZUT6 534 aaKnown RBP18.81■□□□□ 0.6
POLR2A-201ENST00000572844 AMIGO3Q86WK7 504 aa18.81■□□□□ 0.6
POLR2A-201ENST00000572844 SPC24Q8NBT2 197 aa18.81■□□□□ 0.6
POLR2A-201ENST00000572844 GRAPLQ8TC17 118 aaPredicted RBP18.81■□□□□ 0.6
POLR2A-201ENST00000572844 MROH7-TTC4A0A0A0MT08 1334 aa18.81■□□□□ 0.6
POLR2A-201ENST00000572844 DIS3L2Q8IYB7 885 aaKnown RBP18.8■□□□□ 0.6
POLR2A-201ENST00000572844 MPNDQ8N594 471 aa18.8■□□□□ 0.6
POLR2A-201ENST00000572844 TFCP2L1Q9NZI6 479 aa18.8■□□□□ 0.6
POLR2A-201ENST00000572844 ARPP21Q9UBL0 812 aaPredicted RBP18.8■□□□□ 0.6
POLR2A-201ENST00000572844 DDAH1O94760 285 aa18.8■□□□□ 0.6
POLR2A-201ENST00000572844 MARCKSP29966 332 aaPredicted RBP18.8■□□□□ 0.6
POLR2A-201ENST00000572844 SYKP43405 635 aa18.8■□□□□ 0.6
POLR2A-201ENST00000572844 SHC4Q6S5L8 630 aa18.8■□□□□ 0.6
POLR2A-201ENST00000572844 CATIPQ7Z7H3 387 aa18.8■□□□□ 0.6
POLR2A-201ENST00000572844 ANO8Q9HCE9 1232 aaPredicted RBP18.8■□□□□ 0.6
POLR2A-201ENST00000572844 DCP1AQ9NPI6 582 aaPredicted RBP18.8■□□□□ 0.6
POLR2A-201ENST00000572844 BTBD18B2RXH4 712 aa18.79■□□□□ 0.6
POLR2A-201ENST00000572844 USP17L12C9JPN9 530 aa18.79■□□□□ 0.6
POLR2A-201ENST00000572844 USP17L21D6R901 530 aa18.79■□□□□ 0.6
POLR2A-201ENST00000572844 UBE2Q2LH0YL09 131 aa18.79■□□□□ 0.6
POLR2A-201ENST00000572844 PRPF3O43395 683 aaKnown RBP18.79■□□□□ 0.6
POLR2A-201ENST00000572844 NLRP12P59046 1061 aa18.79■□□□□ 0.6
POLR2A-201ENST00000572844 ZRSR1Q15695 479 aaKnown RBP18.79■□□□□ 0.6
POLR2A-201ENST00000572844 IFIT1BQ5T764 474 aaKnown RBP18.79■□□□□ 0.6
POLR2A-201ENST00000572844 NUP133Q8WUM0 1156 aa18.79■□□□□ 0.6
POLR2A-201ENST00000572844 XBP1P17861 261 aa18.78■□□□□ 0.6
POLR2A-201ENST00000572844 FUT2Q10981 343 aa18.78■□□□□ 0.6
POLR2A-201ENST00000572844 NFIXQ14938 502 aa18.78■□□□□ 0.6
POLR2A-201ENST00000572844 STK11IPQ8N1F8 1099 aa18.78■□□□□ 0.6
POLR2A-201ENST00000572844 WDR66Q8TBY9 1149 aa18.78■□□□□ 0.6
POLR2A-201ENST00000572844 TUBE1Q9UJT0 475 aa18.78■□□□□ 0.6
POLR2A-201ENST00000572844 R3HCC1Q9Y3T6 440 aaKnown RBP18.78■□□□□ 0.6
POLR2A-201ENST00000572844 KRI1Q8N9T8 703 aaKnown RBP18.78■□□□□ 0.6
POLR2A-201ENST00000572844 BCL11BQ9C0K0 894 aaPredicted RBP18.78■□□□□ 0.6
POLR2A-201ENST00000572844 PTGS1P23219 599 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms