RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 SAP30BPQ9UHR5 308 aaKnown RBP19.07■□□□□ 0.64
CHD3-215ENST00000572750 ATAD5Q96QE3 1844 aa19.07■□□□□ 0.64
CHD3-215ENST00000572750 FAM196BA6NMK8 535 aa19.06■□□□□ 0.64
CHD3-215ENST00000572750 RNF113AO15541 343 aaKnown RBP19.06■□□□□ 0.64
CHD3-215ENST00000572750 VGLL4Q14135 290 aa19.06■□□□□ 0.64
CHD3-215ENST00000572750 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.06■□□□□ 0.64
CHD3-215ENST00000572750 SDR42E1Q8WUS8 393 aa19.06■□□□□ 0.64
CHD3-215ENST00000572750 CRNKL1Q9BZJ0 848 aaKnown RBP19.06■□□□□ 0.64
CHD3-215ENST00000572750 PUS7LQ9H0K6 701 aaKnown RBP19.06■□□□□ 0.64
CHD3-215ENST00000572750 OSBPL3Q9H4L5 887 aa19.06■□□□□ 0.64
CHD3-215ENST00000572750 FXR1P51114 621 aaKnown RBP eCLIP19.05■□□□□ 0.64
CHD3-215ENST00000572750 MKRN3Q13064 507 aaKnown RBP19.05■□□□□ 0.64
CHD3-215ENST00000572750 CENPQQ7L2Z9 268 aaPredicted RBP19.05■□□□□ 0.64
CHD3-215ENST00000572750 APPBP2Q92624 585 aa19.05■□□□□ 0.64
CHD3-215ENST00000572750 EVI5LQ96CN4 794 aa19.05■□□□□ 0.64
CHD3-215ENST00000572750 CCDC136Q96JN2 1154 aa19.05■□□□□ 0.64
CHD3-215ENST00000572750 ZNF341Q9BYN7 854 aa19.05■□□□□ 0.64
CHD3-215ENST00000572750 PALD1Q9ULE6 856 aa19.05■□□□□ 0.64
CHD3-215ENST00000572750 TRIM6-TRIM34B2RNG4 842 aa19.04■□□□□ 0.64
CHD3-215ENST00000572750 M0R2C6 588 aa19.04■□□□□ 0.64
CHD3-215ENST00000572750 PRKAB2O43741 272 aa19.04■□□□□ 0.64
CHD3-215ENST00000572750 ZFYP08048 801 aaPredicted RBP19.04■□□□□ 0.64
CHD3-215ENST00000572750 RANBP2P49792 3224 aaKnown RBP19.04■□□□□ 0.64
CHD3-215ENST00000572750 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.04■□□□□ 0.64
CHD3-215ENST00000572750 ANKRD13AQ8IZ07 590 aa19.04■□□□□ 0.64
CHD3-215ENST00000572750 OSBP2Q969R2 916 aa19.04■□□□□ 0.64
CHD3-215ENST00000572750 CCDC102AQ96A19 550 aa19.04■□□□□ 0.64
CHD3-215ENST00000572750 ELP3Q9H9T3 547 aa19.04■□□□□ 0.64
CHD3-215ENST00000572750 INPP5BP32019 993 aa19.03■□□□□ 0.64
CHD3-215ENST00000572750 SKAP1Q86WV1 359 aa19.03■□□□□ 0.64
CHD3-215ENST00000572750 ZKSCAN4Q969J2 545 aaPredicted RBP19.03■□□□□ 0.64
CHD3-215ENST00000572750 MAP3K9P80192 1104 aa19.02■□□□□ 0.64
CHD3-215ENST00000572750 LRRFIP1Q32MZ4 808 aaKnown RBP19.02■□□□□ 0.64
CHD3-215ENST00000572750 CNKSR2Q8WXI2 1034 aa19.02■□□□□ 0.64
CHD3-215ENST00000572750 RILPL2Q969X0 211 aa19.02■□□□□ 0.64
CHD3-215ENST00000572750 SEC62Q99442 399 aaKnown RBP19.02■□□□□ 0.64
CHD3-215ENST00000572750 DHX36Q9H2U1 1008 aaKnown RBP19.02■□□□□ 0.64
CHD3-215ENST00000572750 CSADQ9Y600 493 aa19.02■□□□□ 0.64
CHD3-215ENST00000572750 SNCAIPQ9Y6H5 919 aa19.02■□□□□ 0.64
CHD3-215ENST00000572750 COL6A3P12111 3177 aa19.02■□□□□ 0.64
CHD3-215ENST00000572750 GPAA1O43292 621 aa19.01■□□□□ 0.63
CHD3-215ENST00000572750 GSPT1P15170 499 aaKnown RBP19.01■□□□□ 0.63
CHD3-215ENST00000572750 SLC10A4Q96EP9 437 aa19.01■□□□□ 0.63
CHD3-215ENST00000572750 WNK4Q96J92 1243 aa19.01■□□□□ 0.63
CHD3-215ENST00000572750 DCP1AQ9NPI6 582 aaPredicted RBP19.01■□□□□ 0.63
CHD3-215ENST00000572750 SLC4A4Q9Y6R1 1079 aa19.01■□□□□ 0.63
CHD3-215ENST00000572750 MYH8P13535 1937 aa19.01■□□□□ 0.63
CHD3-215ENST00000572750 UNCXA6NJT0 531 aa19■□□□□ 0.63
CHD3-215ENST00000572750 HLA-DOAP06340 250 aa19■□□□□ 0.63
CHD3-215ENST00000572750 GJA5P36382 358 aa19■□□□□ 0.63
CHD3-215ENST00000572750 EVX2Q03828 476 aa19■□□□□ 0.63
CHD3-215ENST00000572750 ZMYM1Q5SVZ6 1142 aa19■□□□□ 0.63
CHD3-215ENST00000572750 TTC22Q5TAA0 569 aa19■□□□□ 0.63
CHD3-215ENST00000572750 SPRYD7Q5W111 196 aa19■□□□□ 0.63
CHD3-215ENST00000572750 OPTNQ96CV9 577 aa19■□□□□ 0.63
CHD3-215ENST00000572750 DNAJC18Q9H819 358 aa19■□□□□ 0.63
CHD3-215ENST00000572750 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19■□□□□ 0.63
CHD3-215ENST00000572750 MCM9Q9NXL9 1143 aa19■□□□□ 0.63
CHD3-215ENST00000572750 PI4KBQ9UBF8 816 aa19■□□□□ 0.63
CHD3-215ENST00000572750 ZNF112Q9UJU3 913 aa19■□□□□ 0.63
CHD3-215ENST00000572750 PHIPQ8WWQ0 1821 aa19■□□□□ 0.63
CHD3-215ENST00000572750 PHF20L1A8MW92 1017 aa18.99■□□□□ 0.63
CHD3-215ENST00000572750 MAP3K10Q02779 954 aa18.99■□□□□ 0.63
CHD3-215ENST00000572750 CCDC129Q6ZRS4 1044 aa18.99■□□□□ 0.63
CHD3-215ENST00000572750 CRACR2BQ8N4Y2 399 aaPredicted RBP18.99■□□□□ 0.63
CHD3-215ENST00000572750 OTUD5Q96G74 571 aa18.99■□□□□ 0.63
CHD3-215ENST00000572750 STRBPQ96SI9 672 aaKnown RBP18.99■□□□□ 0.63
CHD3-215ENST00000572750 A0A0D9SFI3 127 aa18.98■□□□□ 0.63
CHD3-215ENST00000572750 TBC1D12O60347 775 aa18.98■□□□□ 0.63
CHD3-215ENST00000572750 CYP2D6P10635 497 aa18.98■□□□□ 0.63
CHD3-215ENST00000572750 ZNF296Q8WUU4 475 aaPredicted RBP18.98■□□□□ 0.63
CHD3-215ENST00000572750 FAM227BQ96M60 508 aa18.98■□□□□ 0.63
CHD3-215ENST00000572750 TRIM34Q9BYJ4 488 aa18.98■□□□□ 0.63
CHD3-215ENST00000572750 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.98■□□□□ 0.63
CHD3-215ENST00000572750 HERC5Q9UII4 1024 aaKnown RBP18.98■□□□□ 0.63
CHD3-215ENST00000572750 SPDYE5A6NIY4 337 aa18.97■□□□□ 0.63
CHD3-215ENST00000572750 POLR3DP05423 398 aaPredicted RBP18.97■□□□□ 0.63
CHD3-215ENST00000572750 ZBTB48P10074 688 aaPredicted RBP18.97■□□□□ 0.63
CHD3-215ENST00000572750 PLCD1P51178 756 aa18.97■□□□□ 0.63
CHD3-215ENST00000572750 RRP1BQ14684 758 aaKnown RBP18.97■□□□□ 0.63
CHD3-215ENST00000572750 NOL9Q5SY16 702 aaKnown RBP18.97■□□□□ 0.63
CHD3-215ENST00000572750 EPB41L4AQ9HCS5 686 aaPredicted RBP18.97■□□□□ 0.63
CHD3-215ENST00000572750 ATP8A2Q9NTI2 1148 aa18.97■□□□□ 0.63
CHD3-215ENST00000572750 PTPRFP10586 1907 aa18.96■□□□□ 0.63
CHD3-215ENST00000572750 CYP2D7A0A087X1C5 515 aa18.96■□□□□ 0.63
CHD3-215ENST00000572750 NMIQ13287 307 aaPredicted RBP18.96■□□□□ 0.63
CHD3-215ENST00000572750 PKN2Q16513 984 aaKnown RBP18.96■□□□□ 0.63
CHD3-215ENST00000572750 METTL16Q86W50 562 aaKnown RBP18.96■□□□□ 0.63
CHD3-215ENST00000572750 SCYL3Q8IZE3 742 aa18.96■□□□□ 0.63
CHD3-215ENST00000572750 EHD4Q9H223 541 aa18.96■□□□□ 0.63
CHD3-215ENST00000572750 GSG1L2A8MUP6 293 aa18.95■□□□□ 0.62
CHD3-215ENST00000572750 SMIM22K7EJ46 135 aa18.95■□□□□ 0.62
CHD3-215ENST00000572750 SDSP20132 328 aa18.95■□□□□ 0.62
CHD3-215ENST00000572750 SHROOM1Q2M3G4 852 aaPredicted RBP18.95■□□□□ 0.62
CHD3-215ENST00000572750 TTC6Q86TZ1 520 aa18.95■□□□□ 0.62
CHD3-215ENST00000572750 DDRGK1Q96HY6 314 aa18.95■□□□□ 0.62
CHD3-215ENST00000572750 SERPINB13Q9UIV8 391 aa18.95■□□□□ 0.62
CHD3-215ENST00000572750 CTNND1O60716 968 aaKnown RBP18.94■□□□□ 0.62
CHD3-215ENST00000572750 GDF11O95390 407 aa18.94■□□□□ 0.62
CHD3-215ENST00000572750 TBC1D8O95759 1140 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms