RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 KIAA0825Q8IV33 1275 aa20.28■□□□□ 0.84
RPAIN-208ENST00000571043 DDX11Q96FC9 970 aa20.28■□□□□ 0.84
RPAIN-208ENST00000571043 NCOA5Q9HCD5 579 aaKnown RBP20.28■□□□□ 0.84
RPAIN-208ENST00000571043 HPS5Q9UPZ3 1129 aa20.28■□□□□ 0.84
RPAIN-208ENST00000571043 LAMA4Q16363 1823 aa20.28■□□□□ 0.84
RPAIN-208ENST00000571043 GOLGA8BA8MQT2 603 aa20.27■□□□□ 0.84
RPAIN-208ENST00000571043 F8W031 263 aaPredicted RBP20.27■□□□□ 0.84
RPAIN-208ENST00000571043 H3BQV1 296 aa20.27■□□□□ 0.84
RPAIN-208ENST00000571043 LDHCP07864 332 aa20.27■□□□□ 0.84
RPAIN-208ENST00000571043 LIFRP42702 1097 aa20.27■□□□□ 0.84
RPAIN-208ENST00000571043 MRE11P49959 708 aa20.27■□□□□ 0.84
RPAIN-208ENST00000571043 MMP14P50281 582 aa20.27■□□□□ 0.84
RPAIN-208ENST00000571043 GSTO1P78417 241 aa20.27■□□□□ 0.84
RPAIN-208ENST00000571043 HDLBPQ00341 1268 aaKnown RBP20.27■□□□□ 0.84
RPAIN-208ENST00000571043 DNM1Q05193 864 aaKnown RBP20.27■□□□□ 0.84
RPAIN-208ENST00000571043 CTDSPL2Q05D32 466 aa20.27■□□□□ 0.84
RPAIN-208ENST00000571043 IFFO2Q5TF58 517 aa20.27■□□□□ 0.84
RPAIN-208ENST00000571043 IGDCC4Q8TDY8 1250 aa20.27■□□□□ 0.84
RPAIN-208ENST00000571043 DPF2Q92785 391 aa20.27■□□□□ 0.84
RPAIN-208ENST00000571043 ZSCAN16Q9H4T2 348 aaPredicted RBP20.27■□□□□ 0.84
RPAIN-208ENST00000571043 GDPD2Q9HCC8 539 aa20.27■□□□□ 0.84
RPAIN-208ENST00000571043 MAST2Q6P0Q8 1798 aa20.27■□□□□ 0.84
RPAIN-208ENST00000571043 UBE2HP62256 183 aa20.27■□□□□ 0.83
RPAIN-208ENST00000571043 KRT85P78386 507 aa20.27■□□□□ 0.83
RPAIN-208ENST00000571043 PPARAQ07869 468 aa20.27■□□□□ 0.83
RPAIN-208ENST00000571043 SGMS1Q86VZ5 419 aa20.27■□□□□ 0.83
RPAIN-208ENST00000571043 SLF2Q8IX21 1173 aa20.27■□□□□ 0.83
RPAIN-208ENST00000571043 RGS22Q8NE09 1264 aa20.27■□□□□ 0.83
RPAIN-208ENST00000571043 GJA3Q9Y6H8 435 aa20.27■□□□□ 0.83
RPAIN-208ENST00000571043 DYNLL1P63167 89 aaKnown RBP20.26■□□□□ 0.83
RPAIN-208ENST00000571043 DIXDC1Q155Q3 683 aa20.26■□□□□ 0.83
RPAIN-208ENST00000571043 ZSCAN23Q3MJ62 389 aa20.26■□□□□ 0.83
RPAIN-208ENST00000571043 HHIPL2Q6UWX4 724 aa20.26■□□□□ 0.83
RPAIN-208ENST00000571043 SYAP1Q96A49 352 aaPredicted RBP20.26■□□□□ 0.83
RPAIN-208ENST00000571043 GADD45BO75293 160 aaPredicted RBP20.25■□□□□ 0.83
RPAIN-208ENST00000571043 USP17L8P0C7I0 530 aa20.25■□□□□ 0.83
RPAIN-208ENST00000571043 PCP11498 1178 aaKnown RBP20.25■□□□□ 0.83
RPAIN-208ENST00000571043 RESTQ13127 1097 aa20.25■□□□□ 0.83
RPAIN-208ENST00000571043 DPY19L2Q6NUT2 758 aa20.25■□□□□ 0.83
RPAIN-208ENST00000571043 OGFOD1Q8N543 542 aa20.25■□□□□ 0.83
RPAIN-208ENST00000571043 NKX2-3Q8TAU0 364 aa20.25■□□□□ 0.83
RPAIN-208ENST00000571043 SDR42E1Q8WUS8 393 aa20.25■□□□□ 0.83
RPAIN-208ENST00000571043 ZSWIM5Q9P217 1185 aa20.25■□□□□ 0.83
RPAIN-208ENST00000571043 SERPINA10Q9UK55 444 aa20.25■□□□□ 0.83
RPAIN-208ENST00000571043 TACC3Q9Y6A5 838 aa20.25■□□□□ 0.83
RPAIN-208ENST00000571043 GAKO14976 1311 aa20.24■□□□□ 0.83
RPAIN-208ENST00000571043 FIBPO43427 364 aa20.24■□□□□ 0.83
RPAIN-208ENST00000571043 KDM4AO75164 1064 aa20.24■□□□□ 0.83
RPAIN-208ENST00000571043 DDNO94850 711 aaPredicted RBP20.24■□□□□ 0.83
RPAIN-208ENST00000571043 GMPSP49915 693 aaPredicted RBP20.24■□□□□ 0.83
RPAIN-208ENST00000571043 SCNN1DP51172 638 aa20.24■□□□□ 0.83
RPAIN-208ENST00000571043 TMEM67Q5HYA8 995 aa20.24■□□□□ 0.83
RPAIN-208ENST00000571043 FERMT3Q86UX7 667 aa20.24■□□□□ 0.83
RPAIN-208ENST00000571043 TEKT1Q969V4 418 aa20.24■□□□□ 0.83
RPAIN-208ENST00000571043 CRNKL1Q9BZJ0 848 aaKnown RBP20.24■□□□□ 0.83
RPAIN-208ENST00000571043 LY9Q9HBG7 655 aa20.24■□□□□ 0.83
RPAIN-208ENST00000571043 TMEM63CQ9P1W3 806 aa20.24■□□□□ 0.83
RPAIN-208ENST00000571043 HDAC9Q9UKV0 1011 aa20.24■□□□□ 0.83
RPAIN-208ENST00000571043 MROH7-TTC4A0A0A0MT08 1334 aa20.23■□□□□ 0.83
RPAIN-208ENST00000571043 ELP1O95163 1332 aa20.23■□□□□ 0.83
RPAIN-208ENST00000571043 GPR75-ASB3A0A0A6YYF3 556 aa20.23■□□□□ 0.83
RPAIN-208ENST00000571043 CPLX1O14810 134 aa20.23■□□□□ 0.83
RPAIN-208ENST00000571043 CRKP46108 304 aa20.23■□□□□ 0.83
RPAIN-208ENST00000571043 PPP4CP60510 307 aa20.23■□□□□ 0.83
RPAIN-208ENST00000571043 SART3Q15020 963 aaKnown RBP20.23■□□□□ 0.83
RPAIN-208ENST00000571043 APOA5Q6Q788 366 aa20.23■□□□□ 0.83
RPAIN-208ENST00000571043 ATP8A2Q9NTI2 1148 aa20.23■□□□□ 0.83
RPAIN-208ENST00000571043 GLTPD2A6NH11 291 aa20.22■□□□□ 0.83
RPAIN-208ENST00000571043 IFIT3O14879 490 aaKnown RBP20.22■□□□□ 0.83
RPAIN-208ENST00000571043 CDKL5O76039 1030 aa20.22■□□□□ 0.83
RPAIN-208ENST00000571043 FDPSP14324 419 aaKnown RBP20.22■□□□□ 0.83
RPAIN-208ENST00000571043 METAP2P50579 478 aaKnown RBP eCLIP20.22■□□□□ 0.83
RPAIN-208ENST00000571043 ZNF280AP59817 542 aaPredicted RBP20.22■□□□□ 0.83
RPAIN-208ENST00000571043 GAS2L3Q86XJ1 694 aa20.22■□□□□ 0.83
RPAIN-208ENST00000571043 TMTC2Q8N394 836 aa20.22■□□□□ 0.83
RPAIN-208ENST00000571043 ZDHHC15Q96MV8 337 aa20.22■□□□□ 0.83
RPAIN-208ENST00000571043 SCAND2PQ9GZW5 306 aaPredicted RBP20.22■□□□□ 0.83
RPAIN-208ENST00000571043 GRPEL1Q9HAV7 217 aa20.22■□□□□ 0.83
RPAIN-208ENST00000571043 INCENPQ9NQS7 918 aa20.22■□□□□ 0.83
RPAIN-208ENST00000571043 RBM27Q9P2N5 1060 aaKnown RBP20.22■□□□□ 0.83
RPAIN-208ENST00000571043 CNOT7Q9UIV1 285 aaKnown RBP20.22■□□□□ 0.83
RPAIN-208ENST00000571043 MINDY4BA8MYZ0 360 aa20.22■□□□□ 0.83
RPAIN-208ENST00000571043 FGRP09769 529 aa20.22■□□□□ 0.83
RPAIN-208ENST00000571043 XRCC6P12956 609 aaKnown RBP eCLIP20.22■□□□□ 0.83
RPAIN-208ENST00000571043 CPLX2Q6PUV4 134 aaKnown RBP20.22■□□□□ 0.83
RPAIN-208ENST00000571043 MTMR14Q8NCE2 650 aa20.22■□□□□ 0.83
RPAIN-208ENST00000571043 DAGLAQ9Y4D2 1042 aa20.22■□□□□ 0.83
RPAIN-208ENST00000571043 ZBTB43O43298 467 aa20.21■□□□□ 0.83
RPAIN-208ENST00000571043 BAG3O95817 575 aa20.21■□□□□ 0.83
RPAIN-208ENST00000571043 RCAN1P53805 252 aa20.21■□□□□ 0.83
RPAIN-208ENST00000571043 ATL3Q6DD88 541 aa20.21■□□□□ 0.83
RPAIN-208ENST00000571043 APOBEC3HQ6NTF7 200 aaKnown RBP20.21■□□□□ 0.83
RPAIN-208ENST00000571043 NFXL1Q6ZNB6 911 aa20.21■□□□□ 0.83
RPAIN-208ENST00000571043 ESR2Q92731 530 aa20.21■□□□□ 0.83
RPAIN-208ENST00000571043 AATFQ9NY61 560 aaKnown RBP eCLIP20.21■□□□□ 0.83
RPAIN-208ENST00000571043 GPRC5DQ9NZD1 345 aa20.21■□□□□ 0.83
RPAIN-208ENST00000571043 ORC3Q9UBD5 711 aaPredicted RBP20.21■□□□□ 0.83
RPAIN-208ENST00000571043 NID2Q14112 1375 aa20.2■□□□□ 0.82
RPAIN-208ENST00000571043 ERICH2A1L162 156 aa20.2■□□□□ 0.82
RPAIN-208ENST00000571043 CCDC69A6NI79 296 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms