RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 UNC93B1Q9H1C4 597 aa10.59□□□□□ -0.71
CTDNEP1-203ENST00000570385 AATFQ9NY61 560 aaKnown RBP eCLIP10.59□□□□□ -0.71
CTDNEP1-203ENST00000570385 PTPRFP10586 1907 aa10.58□□□□□ -0.72
CTDNEP1-203ENST00000570385 MGAMO43451 1857 aa10.58□□□□□ -0.72
CTDNEP1-203ENST00000570385 DOCK1Q14185 1865 aa10.58□□□□□ -0.72
CTDNEP1-203ENST00000570385 TNPO2O14787 897 aaKnown RBP10.58□□□□□ -0.72
CTDNEP1-203ENST00000570385 ADCY3O60266 1144 aa10.58□□□□□ -0.72
CTDNEP1-203ENST00000570385 TBC1D12O60347 775 aa10.58□□□□□ -0.72
CTDNEP1-203ENST00000570385 SURF6O75683 361 aaKnown RBP10.58□□□□□ -0.72
CTDNEP1-203ENST00000570385 GJB1P08034 283 aa10.58□□□□□ -0.72
CTDNEP1-203ENST00000570385 UQCRFS1P1P0C7P4 283 aa10.58□□□□□ -0.72
CTDNEP1-203ENST00000570385 HMGCS2P54868 508 aa10.58□□□□□ -0.72
CTDNEP1-203ENST00000570385 UBXN2AP68543 259 aa10.58□□□□□ -0.72
CTDNEP1-203ENST00000570385 SHROOM1Q2M3G4 852 aaPredicted RBP10.58□□□□□ -0.72
CTDNEP1-203ENST00000570385 TNNI3KQ59H18 835 aa10.58□□□□□ -0.72
CTDNEP1-203ENST00000570385 NAA16Q6N069 864 aaPredicted RBP10.58□□□□□ -0.72
CTDNEP1-203ENST00000570385 ADGRA1Q86SQ6 560 aa10.58□□□□□ -0.72
CTDNEP1-203ENST00000570385 MAPKAPK5Q8IW41 473 aa10.58□□□□□ -0.72
CTDNEP1-203ENST00000570385 NOL10Q9BSC4 688 aaKnown RBP10.58□□□□□ -0.72
CTDNEP1-203ENST00000570385 AGTPBP1Q9UPW5 1226 aa10.58□□□□□ -0.72
CTDNEP1-203ENST00000570385 FPGT-TNNI3KV9GXZ4 949 aa10.58□□□□□ -0.72
CTDNEP1-203ENST00000570385 PHIPQ8WWQ0 1821 aa10.58□□□□□ -0.72
CTDNEP1-203ENST00000570385 PEX10O60683 326 aa10.57□□□□□ -0.72
CTDNEP1-203ENST00000570385 NPM3O75607 178 aaKnown RBP10.57□□□□□ -0.72
CTDNEP1-203ENST00000570385 INHAP05111 366 aa10.57□□□□□ -0.72
CTDNEP1-203ENST00000570385 CYP2E1P05181 493 aaPredicted RBP10.57□□□□□ -0.72
CTDNEP1-203ENST00000570385 RLBP1P12271 317 aa10.57□□□□□ -0.72
CTDNEP1-203ENST00000570385 CAP2P40123 477 aa10.57□□□□□ -0.72
CTDNEP1-203ENST00000570385 ZAP70P43403 619 aa10.57□□□□□ -0.72
CTDNEP1-203ENST00000570385 GJA8P48165 433 aa10.57□□□□□ -0.72
CTDNEP1-203ENST00000570385 JAG1P78504 1218 aa10.57□□□□□ -0.72
CTDNEP1-203ENST00000570385 ATP8B2P98198 1209 aa10.57□□□□□ -0.72
CTDNEP1-203ENST00000570385 HNRNPUQ00839 825 aaKnown RBP eCLIP10.57□□□□□ -0.72
CTDNEP1-203ENST00000570385 POLA2Q14181 598 aa10.57□□□□□ -0.72
CTDNEP1-203ENST00000570385 CCDC158Q5M9N0 1113 aa10.57□□□□□ -0.72
CTDNEP1-203ENST00000570385 ITPRIPQ8IWB1 547 aa10.57□□□□□ -0.72
CTDNEP1-203ENST00000570385 ZNF280CQ8ND82 737 aa10.57□□□□□ -0.72
CTDNEP1-203ENST00000570385 SLAIN1Q8ND83 568 aa10.57□□□□□ -0.72
CTDNEP1-203ENST00000570385 U2AF1L4Q8WU68 220 aaKnown RBP10.57□□□□□ -0.72
CTDNEP1-203ENST00000570385 TGFBRAP1Q8WUH2 860 aa10.57□□□□□ -0.72
CTDNEP1-203ENST00000570385 CCDC8Q9H0W5 538 aaPredicted RBP10.57□□□□□ -0.72
CTDNEP1-203ENST00000570385 PIH1D3Q9NQM4 214 aaKnown RBP10.57□□□□□ -0.72
CTDNEP1-203ENST00000570385 TLR7Q9NYK1 1049 aaKnown RBP10.57□□□□□ -0.72
CTDNEP1-203ENST00000570385 SAP30BPQ9UHR5 308 aaKnown RBP10.57□□□□□ -0.72
CTDNEP1-203ENST00000570385 SLC45A1Q9Y2W3 748 aa10.57□□□□□ -0.72
CTDNEP1-203ENST00000570385 GDF11O95390 407 aa10.56□□□□□ -0.72
CTDNEP1-203ENST00000570385 FXR1P51114 621 aaKnown RBP eCLIP10.56□□□□□ -0.72
CTDNEP1-203ENST00000570385 DYNLL1P63167 89 aaKnown RBP10.56□□□□□ -0.72
CTDNEP1-203ENST00000570385 CHRDL2Q6WN34 429 aa10.56□□□□□ -0.72
CTDNEP1-203ENST00000570385 FTSJ3Q8IY81 847 aaKnown RBP10.56□□□□□ -0.72
CTDNEP1-203ENST00000570385 NKX2-3Q8TAU0 364 aa10.56□□□□□ -0.72
CTDNEP1-203ENST00000570385 DEFB118Q96PH6 123 aa10.56□□□□□ -0.72
CTDNEP1-203ENST00000570385 BCL11AQ9H165 835 aa10.56□□□□□ -0.72
CTDNEP1-203ENST00000570385 PI4KBQ9UBF8 816 aa10.56□□□□□ -0.72
CTDNEP1-203ENST00000570385 DBNLQ9UJU6 430 aaKnown RBP10.56□□□□□ -0.72
CTDNEP1-203ENST00000570385 PALD1Q9ULE6 856 aa10.56□□□□□ -0.72
CTDNEP1-203ENST00000570385 NDUFB9Q9Y6M9 179 aa10.56□□□□□ -0.72
CTDNEP1-203ENST00000570385 USP17L5A8MUK1 530 aa10.55□□□□□ -0.72
CTDNEP1-203ENST00000570385 FARP2O94887 1054 aaPredicted RBP10.55□□□□□ -0.72
CTDNEP1-203ENST00000570385 BAG3O95817 575 aa10.55□□□□□ -0.72
CTDNEP1-203ENST00000570385 MAP4K4O95819 1239 aaPredicted RBP10.55□□□□□ -0.72
CTDNEP1-203ENST00000570385 TFRCP02786 760 aaKnown RBP10.55□□□□□ -0.72
CTDNEP1-203ENST00000570385 MTMR2Q13614 643 aa10.55□□□□□ -0.72
CTDNEP1-203ENST00000570385 CRACR2BQ8N4Y2 399 aaPredicted RBP10.55□□□□□ -0.72
CTDNEP1-203ENST00000570385 PROCA1Q8NCQ7 364 aaPredicted RBP10.55□□□□□ -0.72
CTDNEP1-203ENST00000570385 SSH3Q8TE77 659 aa10.55□□□□□ -0.72
CTDNEP1-203ENST00000570385 COA7Q96BR5 231 aa10.55□□□□□ -0.72
CTDNEP1-203ENST00000570385 ASCC2Q9H1I8 757 aaPredicted RBP10.55□□□□□ -0.72
CTDNEP1-203ENST00000570385 GPR108Q9NPR9 543 aa10.55□□□□□ -0.72
CTDNEP1-203ENST00000570385 PNMA3Q9UL41 463 aa10.55□□□□□ -0.72
CTDNEP1-203ENST00000570385 MYO5AQ9Y4I1 1855 aaKnown RBP10.55□□□□□ -0.72
CTDNEP1-203ENST00000570385 ZBTB7BO15156 539 aaPredicted RBP10.54□□□□□ -0.72
CTDNEP1-203ENST00000570385 IDH1O75874 414 aaKnown RBP10.54□□□□□ -0.72
CTDNEP1-203ENST00000570385 SGPL1O95470 568 aa10.54□□□□□ -0.72
CTDNEP1-203ENST00000570385 CYP7A1P22680 504 aa10.54□□□□□ -0.72
CTDNEP1-203ENST00000570385 PPP4CP60510 307 aa10.54□□□□□ -0.72
CTDNEP1-203ENST00000570385 FAM110CQ1W6H9 321 aa10.54□□□□□ -0.72
CTDNEP1-203ENST00000570385 UBE2Q1Q7Z7E8 422 aa10.54□□□□□ -0.72
CTDNEP1-203ENST00000570385 MIER1Q8N108 512 aa10.54□□□□□ -0.72
CTDNEP1-203ENST00000570385 MIGA1Q8NAN2 632 aa10.54□□□□□ -0.72
CTDNEP1-203ENST00000570385 EAF2Q96CJ1 260 aaPredicted RBP10.54□□□□□ -0.72
CTDNEP1-203ENST00000570385 TRIM34Q9BYJ4 488 aa10.54□□□□□ -0.72
CTDNEP1-203ENST00000570385 DNAJC18Q9H819 358 aa10.54□□□□□ -0.72
CTDNEP1-203ENST00000570385 AS3MTQ9HBK9 375 aa10.54□□□□□ -0.72
CTDNEP1-203ENST00000570385 HERC5Q9UII4 1024 aaKnown RBP10.54□□□□□ -0.72
CTDNEP1-203ENST00000570385 FLT1P17948 1338 aa10.54□□□□□ -0.72
CTDNEP1-203ENST00000570385 ATAD5Q96QE3 1844 aa10.54□□□□□ -0.72
CTDNEP1-203ENST00000570385 PLCG2P16885 1265 aa10.53□□□□□ -0.72
CTDNEP1-203ENST00000570385 GCLCP48506 637 aaPredicted RBP10.53□□□□□ -0.72
CTDNEP1-203ENST00000570385 IRX3P78415 501 aaPredicted RBP10.53□□□□□ -0.72
CTDNEP1-203ENST00000570385 TRIM32Q13049 653 aa10.53□□□□□ -0.72
CTDNEP1-203ENST00000570385 IRF5Q13568 498 aa10.53□□□□□ -0.72
CTDNEP1-203ENST00000570385 PANK1Q8TE04 598 aa10.53□□□□□ -0.72
CTDNEP1-203ENST00000570385 PXYLP1Q8TE99 480 aa10.53□□□□□ -0.72
CTDNEP1-203ENST00000570385 P2RX7Q99572 595 aaKnown RBP10.53□□□□□ -0.72
CTDNEP1-203ENST00000570385 HTATIP2Q9BUP3 242 aa10.53□□□□□ -0.72
CTDNEP1-203ENST00000570385 DHX36Q9H2U1 1008 aaKnown RBP10.53□□□□□ -0.72
CTDNEP1-203ENST00000570385 ANTXR1Q9H6X2 564 aa10.53□□□□□ -0.72
CTDNEP1-203ENST00000570385 TMOD4Q9NZQ9 345 aa10.53□□□□□ -0.72
CTDNEP1-203ENST00000570385 RBM27Q9P2N5 1060 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms