RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 PODNQ7Z5L7 613 aa7.69□□□□□ -1.18
SMG1-217ENST00000569764 FERMT3Q86UX7 667 aa7.69□□□□□ -1.18
SMG1-217ENST00000569764 GPC2Q8N158 579 aa7.69□□□□□ -1.18
SMG1-217ENST00000569764 IER2Q9BTL4 223 aa7.69□□□□□ -1.18
SMG1-217ENST00000569764 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.69□□□□□ -1.18
SMG1-217ENST00000569764 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.69□□□□□ -1.18
SMG1-217ENST00000569764 LRP6O75581 1613 aa7.69□□□□□ -1.18
SMG1-217ENST00000569764 HUNKP57058 714 aa7.69□□□□□ -1.18
SMG1-217ENST00000569764 COPS6Q7L5N1 327 aa7.69□□□□□ -1.18
SMG1-217ENST00000569764 KRT26Q7Z3Y9 468 aa7.69□□□□□ -1.18
SMG1-217ENST00000569764 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.69□□□□□ -1.18
SMG1-217ENST00000569764 FAM210AQ96ND0 272 aa7.69□□□□□ -1.18
SMG1-217ENST00000569764 FEZ1Q99689 392 aa7.69□□□□□ -1.18
SMG1-217ENST00000569764 GOLGB1Q14789 3259 aaKnown RBP7.69□□□□□ -1.18
SMG1-217ENST00000569764 CCDC172P0C7W6 258 aa7.69□□□□□ -1.18
SMG1-217ENST00000569764 WDR66Q8TBY9 1149 aa7.69□□□□□ -1.18
SMG1-217ENST00000569764 HEG1Q9ULI3 1381 aa7.69□□□□□ -1.18
SMG1-217ENST00000569764 TRIM6-TRIM34B2RNG4 842 aa7.68□□□□□ -1.18
SMG1-217ENST00000569764 ZNF157P51786 506 aaPredicted RBP7.68□□□□□ -1.18
SMG1-217ENST00000569764 RELL1Q8IUW5 271 aa7.68□□□□□ -1.18
SMG1-217ENST00000569764 SP8Q8IXZ3 490 aa7.68□□□□□ -1.18
SMG1-217ENST00000569764 ABCC4O15439 1325 aa7.68□□□□□ -1.18
SMG1-217ENST00000569764 XDHP47989 1333 aa7.68□□□□□ -1.18
SMG1-217ENST00000569764 EP400Q96L91 3159 aa7.68□□□□□ -1.18
SMG1-217ENST00000569764 RNASEH2AO75792 299 aaKnown RBP7.68□□□□□ -1.18
SMG1-217ENST00000569764 UQCRFS1P1P0C7P4 283 aa7.68□□□□□ -1.18
SMG1-217ENST00000569764 MAP2K2P36507 400 aa7.68□□□□□ -1.18
SMG1-217ENST00000569764 NFIXQ14938 502 aa7.68□□□□□ -1.18
SMG1-217ENST00000569764 LDHAL6AQ6ZMR3 332 aa7.68□□□□□ -1.18
SMG1-217ENST00000569764 CYP27B1O15528 508 aa7.68□□□□□ -1.18
SMG1-217ENST00000569764 KIF20AO95235 890 aa7.68□□□□□ -1.18
SMG1-217ENST00000569764 PRMT2P55345 433 aa7.68□□□□□ -1.18
SMG1-217ENST00000569764 CT47A1Q5JQC4 288 aaPredicted RBP7.68□□□□□ -1.18
SMG1-217ENST00000569764 PRPF40BQ6NWY9 871 aaKnown RBP7.68□□□□□ -1.18
SMG1-217ENST00000569764 GIGYF2Q6Y7W6 1299 aaKnown RBP7.68□□□□□ -1.18
SMG1-217ENST00000569764 MYD88Q99836 296 aa7.68□□□□□ -1.18
SMG1-217ENST00000569764 ZFYVE28Q9HCC9 887 aa7.68□□□□□ -1.18
SMG1-217ENST00000569764 ITM2BQ9Y287 266 aa7.68□□□□□ -1.18
SMG1-217ENST00000569764 SLC45A1Q9Y2W3 748 aa7.68□□□□□ -1.18
SMG1-217ENST00000569764 FAM208AQ9UK61 1670 aaKnown RBP7.68□□□□□ -1.18
SMG1-217ENST00000569764 ALDH1L1O75891 902 aa7.67□□□□□ -1.18
SMG1-217ENST00000569764 FOSL1P15407 271 aa7.67□□□□□ -1.18
SMG1-217ENST00000569764 IFT88Q13099 833 aa7.67□□□□□ -1.18
SMG1-217ENST00000569764 SLFNL1Q499Z3 407 aa7.67□□□□□ -1.18
SMG1-217ENST00000569764 PPP1R18Q6NYC8 613 aa7.67□□□□□ -1.18
SMG1-217ENST00000569764 GTF3C2Q8WUA4 911 aaPredicted RBP7.67□□□□□ -1.18
SMG1-217ENST00000569764 DUSP9Q99956 384 aaKnown RBP7.67□□□□□ -1.18
SMG1-217ENST00000569764 TSPYL2Q9H2G4 693 aaPredicted RBP7.67□□□□□ -1.18
SMG1-217ENST00000569764 TMEM63CQ9P1W3 806 aa7.67□□□□□ -1.18
SMG1-217ENST00000569764 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.67□□□□□ -1.18
SMG1-217ENST00000569764 MANSC4A6NHS7 340 aaPredicted RBP7.67□□□□□ -1.18
SMG1-217ENST00000569764 F6X3S4 739 aa7.67□□□□□ -1.18
SMG1-217ENST00000569764 USP17L8P0C7I0 530 aa7.67□□□□□ -1.18
SMG1-217ENST00000569764 RBP3P10745 1247 aa7.67□□□□□ -1.18
SMG1-217ENST00000569764 GRAPQ13588 217 aa7.67□□□□□ -1.18
SMG1-217ENST00000569764 ZNF467Q7Z7K2 595 aaPredicted RBP7.67□□□□□ -1.18
SMG1-217ENST00000569764 TAX1BP1Q86VP1 789 aa7.67□□□□□ -1.18
SMG1-217ENST00000569764 NDUFAF2Q8N183 169 aa7.67□□□□□ -1.18
SMG1-217ENST00000569764 GRAPLQ8TC17 118 aaPredicted RBP7.67□□□□□ -1.18
SMG1-217ENST00000569764 AKT1S1Q96B36 256 aa7.67□□□□□ -1.18
SMG1-217ENST00000569764 ZBTB1Q9Y2K1 713 aa7.67□□□□□ -1.18
SMG1-217ENST00000569764 PPP2R3BQ9Y5P8 575 aa7.67□□□□□ -1.18
SMG1-217ENST00000569764 CAMTA1Q9Y6Y1 1673 aa7.67□□□□□ -1.18
SMG1-217ENST00000569764 PRAMEF22A3QJZ6 481 aa7.67□□□□□ -1.18
SMG1-217ENST00000569764 PABPN1LA6NDY0 278 aaKnown RBP7.67□□□□□ -1.18
SMG1-217ENST00000569764 RASSF7Q02833 373 aa7.67□□□□□ -1.18
SMG1-217ENST00000569764 CHAF1AQ13111 956 aaPredicted RBP7.67□□□□□ -1.18
SMG1-217ENST00000569764 PPP2R5BQ15173 497 aa7.67□□□□□ -1.18
SMG1-217ENST00000569764 LRRC41Q15345 812 aa7.67□□□□□ -1.18
SMG1-217ENST00000569764 ZNF394Q53GI3 561 aa7.67□□□□□ -1.18
SMG1-217ENST00000569764 NACAP1Q9BZK3 213 aa7.67□□□□□ -1.18
SMG1-217ENST00000569764 COA1Q9GZY4 146 aa7.67□□□□□ -1.18
SMG1-217ENST00000569764 V9GYY5 206 aaPredicted RBP7.67□□□□□ -1.18
SMG1-217ENST00000569764 PNPLA7Q6ZV29 1317 aa7.67□□□□□ -1.18
SMG1-217ENST00000569764 SLC4A3P48751 1232 aa7.67□□□□□ -1.18
SMG1-217ENST00000569764 ZC3H12AQ5D1E8 599 aaKnown RBP7.67□□□□□ -1.18
SMG1-217ENST00000569764 SPECC1Q5M775 1068 aa7.67□□□□□ -1.18
SMG1-217ENST00000569764 UTP14CQ5TAP6 766 aaKnown RBP7.67□□□□□ -1.18
SMG1-217ENST00000569764 INTS3Q68E01 1043 aaKnown RBP7.67□□□□□ -1.18
SMG1-217ENST00000569764 KSR2Q6VAB6 950 aa7.67□□□□□ -1.18
SMG1-217ENST00000569764 NPAS4Q8IUM7 802 aa7.67□□□□□ -1.18
SMG1-217ENST00000569764 SMCR8Q8TEV9 937 aaPredicted RBP7.67□□□□□ -1.18
SMG1-217ENST00000569764 XAGE3Q8WTP9 111 aa7.67□□□□□ -1.18
SMG1-217ENST00000569764 ZNF496Q96IT1 587 aaPredicted RBP7.67□□□□□ -1.18
SMG1-217ENST00000569764 KCNH4Q9UQ05 1017 aa7.67□□□□□ -1.18
SMG1-217ENST00000569764 LMO7Q8WWI1 1683 aa7.66□□□□□ -1.18
SMG1-217ENST00000569764 OSBPP22059 807 aa7.66□□□□□ -1.18
SMG1-217ENST00000569764 UBE4AQ14139 1066 aa7.66□□□□□ -1.18
SMG1-217ENST00000569764 GBA2Q9HCG7 927 aaPredicted RBP7.66□□□□□ -1.18
SMG1-217ENST00000569764 KDM3BQ7LBC6 1761 aa7.66□□□□□ -1.18
SMG1-217ENST00000569764 USP17L3A6NCW0 530 aa7.66□□□□□ -1.18
SMG1-217ENST00000569764 USP17L4A6NCW7 530 aa7.66□□□□□ -1.18
SMG1-217ENST00000569764 LRCH2Q5VUJ6 765 aa7.66□□□□□ -1.18
SMG1-217ENST00000569764 USP17L1Q7RTZ2 530 aa7.66□□□□□ -1.18
SMG1-217ENST00000569764 CHCHD3Q9NX63 227 aaKnown RBP7.66□□□□□ -1.18
SMG1-217ENST00000569764 SIPA1L3O60292 1781 aaPredicted RBP7.66□□□□□ -1.18
SMG1-217ENST00000569764 RIMBP2O15034 1052 aa7.66□□□□□ -1.18
SMG1-217ENST00000569764 CCP110O43303 1012 aa7.66□□□□□ -1.18
SMG1-217ENST00000569764 CELF2O95319 508 aaKnown RBP7.66□□□□□ -1.18
SMG1-217ENST00000569764 NEFHP12036 1026 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms