RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 PNMA3Q9UL41 463 aa16.1■□□□□ 0.17
SPG7-221ENST00000569720 FPGT-TNNI3KV9GXZ4 949 aa16.1■□□□□ 0.17
SPG7-221ENST00000569720 SLURP2P0DP57 97 aa16.09■□□□□ 0.17
SPG7-221ENST00000569720 UBXN2AP68543 259 aa16.09■□□□□ 0.17
SPG7-221ENST00000569720 ITPRIPQ8IWB1 547 aa16.09■□□□□ 0.17
SPG7-221ENST00000569720 NKX2-3Q8TAU0 364 aa16.09■□□□□ 0.17
SPG7-221ENST00000569720 SNRKQ9NRH2 765 aa16.09■□□□□ 0.17
SPG7-221ENST00000569720 HERC5Q9UII4 1024 aaKnown RBP16.09■□□□□ 0.17
SPG7-221ENST00000569720 AGTPBP1Q9UPW5 1226 aa16.09■□□□□ 0.17
SPG7-221ENST00000569720 CDK5RAP2Q96SN8 1893 aa16.08■□□□□ 0.17
SPG7-221ENST00000569720 MYO5AQ9Y4I1 1855 aaKnown RBP16.08■□□□□ 0.17
SPG7-221ENST00000569720 FAM196BA6NMK8 535 aa16.08■□□□□ 0.16
SPG7-221ENST00000569720 IGSF3O75054 1194 aa16.08■□□□□ 0.16
SPG7-221ENST00000569720 PRKCZQ05513 592 aa16.08■□□□□ 0.16
SPG7-221ENST00000569720 PROCA1Q8NCQ7 364 aaPredicted RBP16.08■□□□□ 0.16
SPG7-221ENST00000569720 DBNDD2Q9BQY9 259 aa16.08■□□□□ 0.16
SPG7-221ENST00000569720 DHX36Q9H2U1 1008 aaKnown RBP16.08■□□□□ 0.16
SPG7-221ENST00000569720 ZBED9Q6R2W3 1325 aa16.08■□□□□ 0.16
SPG7-221ENST00000569720 FOCADQ5VW36 1801 aa16.08■□□□□ 0.16
SPG7-221ENST00000569720 CAP2P40123 477 aa16.07■□□□□ 0.16
SPG7-221ENST00000569720 PABPC4Q13310 644 aaKnown RBP eCLIP16.07■□□□□ 0.16
SPG7-221ENST00000569720 MTFR1Q15390 333 aa16.07■□□□□ 0.16
SPG7-221ENST00000569720 CCDC84Q86UT8 332 aaPredicted RBP16.07■□□□□ 0.16
SPG7-221ENST00000569720 ZNF280CQ8ND82 737 aa16.07■□□□□ 0.16
SPG7-221ENST00000569720 SLAIN1Q8ND83 568 aa16.07■□□□□ 0.16
SPG7-221ENST00000569720 SH3RF3Q8TEJ3 882 aaPredicted RBP16.07■□□□□ 0.16
SPG7-221ENST00000569720 ZNF512BQ96KM6 892 aaPredicted RBP16.07■□□□□ 0.16
SPG7-221ENST00000569720 TRIM34Q9BYJ4 488 aa16.07■□□□□ 0.16
SPG7-221ENST00000569720 C1orf115Q9H7X2 142 aa16.07■□□□□ 0.16
SPG7-221ENST00000569720 AS3MTQ9HBK9 375 aa16.07■□□□□ 0.16
SPG7-221ENST00000569720 AATFQ9NY61 560 aaKnown RBP eCLIP16.07■□□□□ 0.16
SPG7-221ENST00000569720 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.07■□□□□ 0.16
SPG7-221ENST00000569720 PI4KBQ9UBF8 816 aa16.07■□□□□ 0.16
SPG7-221ENST00000569720 LOC285556D6RIA3 1793 aa16.07■□□□□ 0.16
SPG7-221ENST00000569720 USP17L5A8MUK1 530 aa16.06■□□□□ 0.16
SPG7-221ENST00000569720 TNPO2O14787 897 aaKnown RBP16.06■□□□□ 0.16
SPG7-221ENST00000569720 PPP4CP60510 307 aa16.06■□□□□ 0.16
SPG7-221ENST00000569720 SPP2Q13103 211 aa16.06■□□□□ 0.16
SPG7-221ENST00000569720 NOP58Q9Y2X3 529 aaKnown RBP16.06■□□□□ 0.16
SPG7-221ENST00000569720 ZBTB7BO15156 539 aaPredicted RBP16.05■□□□□ 0.16
SPG7-221ENST00000569720 CYP2E1P05181 493 aaPredicted RBP16.05■□□□□ 0.16
SPG7-221ENST00000569720 GJB1P08034 283 aa16.05■□□□□ 0.16
SPG7-221ENST00000569720 CCL5P13501 91 aa16.05■□□□□ 0.16
SPG7-221ENST00000569720 HABP4Q5JVS0 413 aaKnown RBP16.05■□□□□ 0.16
SPG7-221ENST00000569720 TREML2Q5T2D2 321 aa16.05■□□□□ 0.16
SPG7-221ENST00000569720 COA7Q96BR5 231 aa16.05■□□□□ 0.16
SPG7-221ENST00000569720 RNF208Q9H0X6 261 aa16.05■□□□□ 0.16
SPG7-221ENST00000569720 GABRQQ9UN88 632 aa16.05■□□□□ 0.16
SPG7-221ENST00000569720 CEP290O15078 2479 aa16.05■□□□□ 0.16
SPG7-221ENST00000569720 DOCK3Q8IZD9 2030 aa16.04■□□□□ 0.16
SPG7-221ENST00000569720 SIPA1L1O43166 1804 aa16.04■□□□□ 0.16
SPG7-221ENST00000569720 ADCY3O60266 1144 aa16.04■□□□□ 0.16
SPG7-221ENST00000569720 ZAP70P43403 619 aa16.04■□□□□ 0.16
SPG7-221ENST00000569720 GCLCP48506 637 aaPredicted RBP16.04■□□□□ 0.16
SPG7-221ENST00000569720 FLT3LGP49771 235 aa16.04■□□□□ 0.16
SPG7-221ENST00000569720 HMGCS2P54868 508 aa16.04■□□□□ 0.16
SPG7-221ENST00000569720 FAM110CQ1W6H9 321 aa16.04■□□□□ 0.16
SPG7-221ENST00000569720 MAPKAPK5Q8IW41 473 aa16.04■□□□□ 0.16
SPG7-221ENST00000569720 CRACR2BQ8N4Y2 399 aaPredicted RBP16.04■□□□□ 0.16
SPG7-221ENST00000569720 ANKRD13CQ8N6S4 541 aa16.04■□□□□ 0.16
SPG7-221ENST00000569720 TGFBRAP1Q8WUH2 860 aa16.04■□□□□ 0.16
SPG7-221ENST00000569720 CCDC8Q9H0W5 538 aaPredicted RBP16.04■□□□□ 0.16
SPG7-221ENST00000569720 MYH1P12882 1939 aa16.04■□□□□ 0.16
SPG7-221ENST00000569720 FLT1P17948 1338 aa16.03■□□□□ 0.16
SPG7-221ENST00000569720 HLA-DOAP06340 250 aa16.03■□□□□ 0.16
SPG7-221ENST00000569720 ASNSP08243 561 aa16.03■□□□□ 0.16
SPG7-221ENST00000569720 GJA8P48165 433 aa16.03■□□□□ 0.16
SPG7-221ENST00000569720 IRF5Q13568 498 aa16.03■□□□□ 0.16
SPG7-221ENST00000569720 CERS3Q8IU89 383 aa16.03■□□□□ 0.16
SPG7-221ENST00000569720 ERC1Q8IUD2 1116 aa16.03■□□□□ 0.16
SPG7-221ENST00000569720 FOXP4Q8IVH2 680 aaPredicted RBP16.03■□□□□ 0.16
SPG7-221ENST00000569720 PXYLP1Q8TE99 480 aa16.03■□□□□ 0.16
SPG7-221ENST00000569720 SHISA4Q96DD7 197 aa16.03■□□□□ 0.16
SPG7-221ENST00000569720 GINM1Q9NU53 330 aa16.03■□□□□ 0.16
SPG7-221ENST00000569720 DBNLQ9UJU6 430 aaKnown RBP16.03■□□□□ 0.16
SPG7-221ENST00000569720 RLBP1P12271 317 aa16.02■□□□□ 0.16
SPG7-221ENST00000569720 SH3D19Q5HYK7 790 aa16.02■□□□□ 0.16
SPG7-221ENST00000569720 ADGRA1Q86SQ6 560 aa16.02■□□□□ 0.16
SPG7-221ENST00000569720 WDR18Q9BV38 432 aa16.02■□□□□ 0.16
SPG7-221ENST00000569720 TMOD4Q9NZQ9 345 aa16.02■□□□□ 0.16
SPG7-221ENST00000569720 IDH1O75874 414 aaKnown RBP16.01■□□□□ 0.15
SPG7-221ENST00000569720 MS4A1P11836 297 aa16.01■□□□□ 0.15
SPG7-221ENST00000569720 CAPN2P17655 700 aa16.01■□□□□ 0.15
SPG7-221ENST00000569720 CYP7A1P22680 504 aa16.01■□□□□ 0.15
SPG7-221ENST00000569720 RRP1BQ14684 758 aaKnown RBP16.01■□□□□ 0.15
SPG7-221ENST00000569720 U2AF1L4Q8WU68 220 aaKnown RBP16.01■□□□□ 0.15
SPG7-221ENST00000569720 DPF3Q92784 378 aa16.01■□□□□ 0.15
SPG7-221ENST00000569720 EAF2Q96CJ1 260 aaPredicted RBP16.01■□□□□ 0.15
SPG7-221ENST00000569720 HTATIP2Q9BUP3 242 aa16.01■□□□□ 0.15
SPG7-221ENST00000569720 ASCC2Q9H1I8 757 aaPredicted RBP16.01■□□□□ 0.15
SPG7-221ENST00000569720 PIH1D3Q9NQM4 214 aaKnown RBP16.01■□□□□ 0.15
SPG7-221ENST00000569720 TAOK2Q9UL54 1235 aa16.01■□□□□ 0.15
SPG7-221ENST00000569720 PALD1Q9ULE6 856 aa16.01■□□□□ 0.15
SPG7-221ENST00000569720 INHAP05111 366 aa16■□□□□ 0.15
SPG7-221ENST00000569720 ELNP15502 786 aa16■□□□□ 0.15
SPG7-221ENST00000569720 BACE1P56817 501 aa16■□□□□ 0.15
SPG7-221ENST00000569720 IRX3P78415 501 aaPredicted RBP16■□□□□ 0.15
SPG7-221ENST00000569720 MTMR2Q13614 643 aa16■□□□□ 0.15
SPG7-221ENST00000569720 HSP90AB4PQ58FF6 505 aa16■□□□□ 0.15
SPG7-221ENST00000569720 CEP85Q6P2H3 762 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms